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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:37.0 nTPM
HPA Brain:113.3 nTPM
GTEx:37.0 nTPM
FANTOM5:65.4 Scaled Tags Per Million
Pig:24.1 nTPM
Mouse:29.4 nTPM
Allen mouse:6.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005923
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 105.1
2289 Male, age 61, right hemisphere 120.9
2290 Female, age 72, unknown 120.8
1781 Male, age 74, unknown 110.7
1857 Female, age 85, left hemisphere 108.6
2846 Female, age 79, unknown 104.7
1854 Male, age 80, left hemisphere 98.7
2288 Male, age 75, left hemisphere 92.7
2481 Female, age 94, left hemisphere 83.8
Globus pallidus, externus
nTPM: 71.5
2646 Male, age 61, right hemisphere 100.0
2567 Female, age 72, unknown 72.8
2772 Female, age 79, unknown 69.9
2395 Male, age 75, both hemispheres 60.7
1996 Male, age 80, right hemisphere 54.0
Globus pallidus, internus
nTPM: 57.4
2483 Female, age 94, right hemisphere 83.5
1818 Male, age 74, unknown 60.8
2566 Female, age 72, unknown 57.6
2037 Male, age 80, right hemisphere 56.2
2287 Male, age 75, right hemisphere 48.7
2778 Female, age 91, both hemispheres 48.7
2111 Female, age 85, right hemisphere 46.7
Nucleus accumbens
nTPM: 94.5
2824 Male, age 61, right hemisphere 118.1
1783 Male, age 74, unknown 117.9
1806 Female, age 85, left hemisphere 107.9
1856 Female, age 91, right hemisphere 106.3
2286 Male, age 75, left hemisphere 88.9
2698 Female, age 72, unknown 78.0
2732 Male, age 80, right hemisphere 73.1
2391 Female, age 94, left hemisphere 65.6
Nucleus basalis of Meynert
nTPM: 102.5
2484 Female, age 94, left hemisphere 115.2
2569 Male, age 61, both hemispheres 108.3
2393 Male, age 80, right hemisphere 95.0
2821 Male, age 75, both hemispheres 91.4
Nucleus of the diagonal band
nTPM: 98.5
2195 Female, age 85, both hemispheres 112.7
2775 Male, age 80, right hemisphere 108.7
2029 Male, age 61, right hemisphere 100.7
1812 Female, age 91, both hemispheres 86.0
1979 Male, age 74, unknown 84.4
Putamen
nTPM: 113.3
2466 Female, age 79, unknown 139.8
2489 Female, age 72, unknown 128.7
1838 Male, age 80, right hemisphere 114.6
2647 Male, age 75, left hemisphere 114.4
1829 Male, age 74, unknown 112.5
1937 Female, age 91, right hemisphere 97.2
2482 Female, age 94, left hemisphere 86.2
Septal nuclei
nTPM: 97.1
1960 Male, age 74, unknown 128.9
2059 Female, age 85, both hemispheres 119.8
2031 Female, age 72, unknown 96.8
2009 Female, age 91, both hemispheres 89.6
2394 Male, age 61, left hemisphere 83.3
2199 Male, age 80, right hemisphere 82.8
2629 Female, age 94, right hemisphere 78.3
Stria terminalis, bed nucleus
nTPM: 101.6
2486 Female, age 94, both hemispheres 112.2
1974 Female, age 91, both hemispheres 102.6
2201 Male, age 74, unknown 90.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 34.1
Samples: 246

Max nTPM: 59.1
Min nTPM: 12.6
Std nTPM: 9.3
Median nTPM: 33.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 59.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 56.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 53.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 51.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 51.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 51.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 50.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 49.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 49.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 49.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 49.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 48.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 48.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 48.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 48.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 48.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 47.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 47.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 46.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 46.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 46.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 46.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 46.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 45.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 45.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 45.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 45.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 45.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 45.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 45.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 45.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 44.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 44.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 44.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 44.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 44.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 44.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 44.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 43.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 43.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 43.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 43.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 43.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 43.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 42.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 42.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 42.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 42.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 42.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 41.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 41.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 41.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 41.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 41.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 40.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 40.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 40.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 40.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 40.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 40.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 40.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 40.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 40.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 39.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 39.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 39.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 39.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 39.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 39.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 38.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 38.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 38.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 38.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 38.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 38.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 38.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 38.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 38.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 37.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 37.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 37.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 37.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 36.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 36.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 36.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 36.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 36.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 36.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 35.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 35.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 35.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 35.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 34.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 34.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 34.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 34.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 34.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 34.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 33.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 33.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 33.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 33.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 33.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 33.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 33.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 33.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 33.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 33.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 32.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 32.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 32.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 32.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 32.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 32.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 32.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 32.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 32.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 32.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 31.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 31.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 31.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 31.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 31.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 31.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 31.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 31.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 31.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 31.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 31.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 30.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 30.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 30.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 30.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 30.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 30.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 30.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 30.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 30.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 30.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 29.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 29.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 29.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 29.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 29.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 28.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 28.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 28.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 28.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 28.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 28.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 27.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 27.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 27.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 27.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 27.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 27.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 27.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 27.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 27.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 27.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 27.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 27.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 27.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 26.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 26.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 26.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 26.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 26.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 26.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 26.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 26.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 25.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 25.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 25.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 25.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 25.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 25.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 25.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 25.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 25.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 25.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 25.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 25.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 25.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 24.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 24.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 24.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 24.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 24.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 24.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 24.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 24.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 23.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 23.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 23.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 23.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 22.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 22.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 22.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 22.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 22.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 21.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 21.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 20.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 20.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 20.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 20.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 19.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 19.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 19.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 19.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 19.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 19.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 18.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 16.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 16.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 13.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 12.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 37.0
Samples: 246

Max nTPM: 62.7
Min nTPM: 11.4
Std nTPM: 10.0
Median nTPM: 38.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 62.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 57.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 57.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 57.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 55.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 55.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 52.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 52.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 52.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 52.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 52.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 51.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 51.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 50.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 50.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 50.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 50.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 49.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 49.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 49.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 49.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 48.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 48.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 48.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 48.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 48.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 48.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 47.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 47.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 47.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 47.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 47.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 47.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 47.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 47.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 47.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 47.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 47.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 46.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 46.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 46.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 46.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 46.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 46.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 46.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 46.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 45.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 45.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 45.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 44.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 44.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 44.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 44.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 44.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 44.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 43.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 43.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 43.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 43.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 43.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 43.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 43.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 43.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 43.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 43.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 43.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 43.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 43.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 43.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 42.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 42.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 42.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 42.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 42.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 42.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 42.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 42.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 42.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 42.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 42.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 42.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 42.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 42.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 42.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 42.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 41.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 41.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 41.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 41.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 41.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 41.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 41.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 40.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 40.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 40.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 40.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 40.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 40.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 40.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 40.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 40.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 40.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 39.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 39.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 39.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 39.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 39.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 38.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 38.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 38.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 38.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 38.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 38.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 38.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 38.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 38.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 37.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 37.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 37.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 37.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 37.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 36.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 36.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 36.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 36.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 36.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 36.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 36.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 35.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 35.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 35.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 35.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 35.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 35.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 35.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 35.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 35.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 34.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 34.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 34.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 34.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 34.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 34.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 34.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 33.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 33.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 33.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 33.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 32.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 32.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 32.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 32.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 31.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 31.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 31.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 31.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 31.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 31.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 31.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 30.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 30.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 30.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 30.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 29.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 29.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 29.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 29.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 28.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 28.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 28.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 28.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 28.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 27.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 27.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 27.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 27.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 27.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 27.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 27.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 27.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 27.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 27.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 27.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 27.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 27.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 26.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 26.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 26.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 26.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 26.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 25.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 25.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 25.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 25.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 25.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 25.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 24.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 24.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 24.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 24.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 24.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 24.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 24.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 24.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 23.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 23.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 23.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 23.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 22.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 22.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 22.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 21.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 21.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 21.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 21.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 21.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 21.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 21.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 20.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 20.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 20.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 19.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 18.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 17.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 16.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 16.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 16.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 15.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 14.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 11.4
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Brain - Putamen (basal ganglia)
Average nTPM: 32.8
Samples: 205

Max nTPM: 58.4
Min nTPM: 11.6
Std nTPM: 9.1
Median nTPM: 33.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 58.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 52.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 49.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 49.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 48.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 48.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 48.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 48.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 47.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 45.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 45.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 45.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 45.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 44.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 44.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 44.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 44.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 44.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 44.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 44.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 44.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 44.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 43.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 43.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 43.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 43.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 42.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 42.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 42.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 42.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 42.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 42.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 41.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 41.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 41.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 41.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 40.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 40.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 40.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 40.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 40.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 40.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 40.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 40.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 39.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 39.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 39.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 39.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 39.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 39.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 39.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 39.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 38.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 38.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 38.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 38.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 38.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 38.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 38.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 38.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 38.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 38.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 37.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 37.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 37.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 37.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 37.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 37.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 36.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 36.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 36.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 36.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 36.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 36.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 36.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 35.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 35.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 35.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 35.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 35.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 35.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 35.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 35.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 35.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 35.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 34.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 34.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 34.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 33.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 33.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 33.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 33.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 33.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 32.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 32.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 32.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 32.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 32.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 32.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 31.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 31.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 31.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 31.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 31.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 30.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 30.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 30.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 30.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 30.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 30.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 30.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 30.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 30.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 30.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 30.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 30.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 29.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 29.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 29.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 29.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 29.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 28.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 28.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 28.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 28.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 28.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 28.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 28.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 28.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 28.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 27.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 27.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 27.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 26.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 26.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 26.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 26.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 26.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 25.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 25.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 25.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 25.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 25.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 24.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 24.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 24.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 24.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 23.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 23.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 23.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 23.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 22.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 22.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 22.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 22.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 22.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 22.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 21.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 21.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 21.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 21.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 21.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 21.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 20.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 20.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 20.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 19.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 19.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 19.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 19.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 18.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 18.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 16.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 16.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 16.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 15.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 15.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 15.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 14.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 11.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 11.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

65.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 53.6
FF:10164-103B2 76 years, female 53.6
Nucleus accumbens
Scaled Tags Per Million: 65.4
FF:10037-101F1 23-56 years, mixed 65.4
Putamen
Scaled Tags Per Million: 63.9
FF:10176-103C5 60 years, female 63.9
Globus pallidus
Scaled Tags Per Million: 35.0
FF:10161-103A8 76 years, female 37.1
FF:10175-103C4 60 years, female 32.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.1
Pig sample Sample description nTPM
Caudate
nTPM: 24.1
Samples: 4

Max nTPM: 25.9
Min nTPM: 22.0
Sample A Female 22.0
Sample B Female 24.7
Sample C Male 25.9
Sample D Male 23.9
Putamen
nTPM: 23.5
Samples: 4

Max nTPM: 28.4
Min nTPM: 21.5
Sample A Female 21.5
Sample B Female 21.9
Sample C Male 22.3
Sample D Male 28.4
Septum
nTPM: 20.8
Samples: 4

Max nTPM: 23.0
Min nTPM: 18.8
Sample A Female 23.0
Sample B Female 20.0
Sample C Male 21.3
Sample D Male 18.8
Ventral pallidum
nTPM: 23.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 21.2
Sample A Female 24.0
Sample B Female 21.2
Sample C Male 25.3
Sample D Male 23.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 28.0
Samples: 4

Max nTPM: 30.2
Min nTPM: 26.0
Sample A Male 28.6
Sample B Male 30.2
Sample C Female 27.2
Sample D Female 26.0
Septum
nTPM: 20.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 19.6
Sample A Male 23.1
Sample B Male 20.0
Sample C Female 20.8
Sample D Female 19.6
Ventral forebrain
nTPM: 29.4
Samples: 4

Max nTPM: 31.0
Min nTPM: 28.5
Sample A Male 29.4
Sample B Male 28.8
Sample C Female 28.5
Sample D Female 31.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.5
378553 Antisense, RP_040625_01_B08, Mouse strain C57BL/6J (56 days, male) 6.8
75774668 Antisense, RP_060530_01_C05, Mouse strain C57BL/6J (56 days, male) 6.3
Pallidum
Expression energy: 4.5
378553 Antisense, RP_040625_01_B08, Mouse strain C57BL/6J (56 days, male) 4.6
75774668 Antisense, RP_060530_01_C05, Mouse strain C57BL/6J (56 days, male) 4.3

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