PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:926.6 nTPM
FANTOM5:1013.9 Scaled Tags Per Million
Pig:754.9 nTPM
Mouse:496.6 nTPM
Allen mouse:8.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 926.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 628.1
2090 Male, age 80, both hemispheres 683.5
2301 Female, age 85, both hemispheres 671.6
2188 Female, age 91, both hemispheres 662.4
1984 Male, age 76, both hemispheres 495.0
Area postrema
nTPM: 615.5
2306 Male, age 80, both hemispheres 741.7
2799 Male, age 61, both hemispheres 678.7
2054 Male, age 76, both hemispheres 426.3
Dorsal cochlear nucleus
nTPM: 558.8
2187 Female, age 91, both hemispheres 629.7
2378 Male, age 80, both hemispheres 608.9
2802 Male, age 74, right hemisphere 529.2
2058 Male, age 76, both hemispheres 526.5
2370 Male, age 61, both hemispheres 499.5
Dorsal medullary reticular nucleus
nTPM: 553.4
2373 Male, age 61, both hemispheres 587.8
2088 Male, age 76, both hemispheres 548.4
2040 Female, age 85, both hemispheres 523.8
Dorsal motor vagal complex
nTPM: 463.0
2185 Male, age 76, both hemispheres 634.3
2797 Male, age 61, both hemispheres 593.5
2000 Male, age 74, unknown 501.0
2844 Male, age 55, unknown 448.0
2813 Female, age 72, unknown 394.3
2133 Female, age 91, both hemispheres 385.9
2807 Female, age 85, both hemispheres 374.0
2643 Male, age 74, both hemispheres 373.0
Dorsal tegmental nucleus
nTPM: 496.1
2083 Male, age 80, both hemispheres 657.8
2326 Male, age 74, both hemispheres 580.6
1936 Male, age 76, left hemisphere 481.5
2358 Male, age 61, both hemispheres 264.5
Dorsolateral tegmental area
nTPM: 562.3
2751 Female, age 85, both hemispheres 818.1
2654 Male, age 80, both hemispheres 650.0
2360 Male, age 74, both hemispheres 550.3
2337 Male, age 61, both hemispheres 454.9
2141 Male, age 76, both hemispheres 338.3
Gigantocellular reticular nuclei, medullary
nTPM: 601.9
2314 Male, age 61, both hemispheres 914.5
2387 Female, age 91, both hemispheres 699.5
1876 Female, age 85, both hemispheres 651.6
2462 Male, age 74, both hemispheres 469.1
2310 Male, age 80, both hemispheres 455.9
2022 Male, age 76, right hemisphere 420.8
Gigantocellular reticular nuclei, pars
nTPM: 454.8
2336 Male, age 61, both hemispheres 498.8
2084 Female, age 85, both hemispheres 491.2
2706 Male, age 80, both hemispheres 471.8
2330 Male, age 80, both hemispheres 452.2
2168 Male, age 76, both hemispheres 359.9
Inferior olive
nTPM: 759.4
2178 Male, age 61, both hemispheres 885.4
2085 Female, age 85, both hemispheres 878.5
2563 Male, age 74, both hemispheres 783.5
2379 Male, age 80, both hemispheres 723.9
2628 Female, age 91, both hemispheres 525.7
Kolliker-Fuse nucleus
nTPM: 601.3
2315 Male, age 76, right hemisphere 805.3
2793 Female, age 91, left hemisphere 538.4
2163 Male, age 80, both hemispheres 460.3
Lateral lemniscal nuclei
nTPM: 465.5
2036 Male, age 80, both hemispheres 525.2
2320 Female, age 91, left hemisphere 503.9
2746 Female, age 85, left hemisphere 473.1
2169 Male, age 76, both hemispheres 414.3
2453 Male, age 74, right hemisphere 410.9
Lateral medullary reticular nucleus
nTPM: 750.8
2305 Male, age 74, both hemispheres 973.0
2852 Male, age 80, both hemispheres 873.1
2190 Female, age 85, both hemispheres 730.4
2374 Male, age 61, both hemispheres 702.9
2804 Female, age 91, both hemispheres 677.2
2044 Male, age 76, both hemispheres 548.1
Lateral parabrachial nucleus
nTPM: 601.8
2792 Male, age 76, both hemispheres 875.9
2013 Male, age 80, both hemispheres 609.0
2139 Female, age 85, right hemisphere 510.4
2790 Male, age 61, both hemispheres 412.0
Lateral vestibular nucleus
nTPM: 505.0
2311 Male, age 80, both hemispheres 581.6
2184 Male, age 76, both hemispheres 428.4
Locus coeruleus
nTPM: 353.2
2123 Female, age 91, both hemispheres 396.5
2317 Female, age 72, unknown 395.5
2788 Male, age 74, unknown 363.6
2162 Male, age 80, both hemispheres 357.8
2014 Male, age 55, unknown 350.2
2720 Male, age 74, both hemispheres 319.3
1980 Male, age 76, both hemispheres 289.6
Medial olivary nucleus
nTPM: 886.3
1943 Male, age 61, both hemispheres 1057.4
1962 Male, age 76, both hemispheres 1003.3
2138 Female, age 91, both hemispheres 882.3
2851 Male, age 80, both hemispheres 602.1
Medial parabrachial nucleus
nTPM: 554.6
2463 Female, age 85, right hemisphere 747.5
2170 Female, age 91, both hemispheres 705.1
2854 Male, age 80, both hemispheres 478.0
2786 Male, age 76, both hemispheres 448.1
2156 Male, age 61, both hemispheres 394.5
Medial periolivary nuclei
nTPM: 528.2
2791 Male, age 74, right hemisphere 693.4
2081 Male, age 80, both hemispheres 616.1
2458 Female, age 91, both hemispheres 511.4
2063 Male, age 76, both hemispheres 487.7
2171 Female, age 85, both hemispheres 332.6
Medial vestibular nucleus
nTPM: 536.3
2801 Male, age 74, both hemispheres 691.6
2093 Male, age 80, both hemispheres 606.3
2743 Female, age 85, both hemispheres 563.6
2803 Female, age 91, both hemispheres 558.3
2624 Male, age 61, both hemispheres 467.6
2134 Male, age 76, both hemispheres 330.4
Motor facial nucleus
nTPM: 501.5
2126 Male, age 61, both hemispheres 660.4
2365 Male, age 74, right hemisphere 615.5
2795 Female, age 91, both hemispheres 482.8
2062 Male, age 76, both hemispheres 439.9
2697 Female, age 85, both hemispheres 437.0
2327 Male, age 80, both hemispheres 373.5
Motor hypoglossal nucleus
nTPM: 499.4
2125 Female, age 91, both hemispheres 662.2
2132 Female, age 85, both hemispheres 570.9
2182 Male, age 80, both hemispheres 521.4
2277 Male, age 76, both hemispheres 410.2
2461 Male, age 61, both hemispheres 332.1
Motor trigeminal nucleus
nTPM: 460.7
2321 Female, age 91, both hemispheres 521.2
2560 Male, age 74, both hemispheres 504.5
2309 Male, age 76, both hemispheres 465.2
2079 Male, age 80, both hemispheres 439.7
2335 Male, age 61, both hemispheres 372.7
Nuclei of the trapezoid body
nTPM: 470.2
2368 Female, age 91, both hemispheres 568.4
2166 Male, age 80, both hemispheres 536.0
1983 Male, age 76, both hemispheres 467.7
2159 Male, age 61, both hemispheres 436.4
2735 Female, age 85, both hemispheres 342.3
Nucleus ambiguus
nTPM: 757.3
2071 Male, age 76, both hemispheres 1066.2
2096 Female, age 85, both hemispheres 448.4
Nucleus cuneatus
nTPM: 614.0
2380 Male, age 80, both hemispheres 882.7
2808 Female, age 85, both hemispheres 728.2
2376 Male, age 61, both hemispheres 673.5
2100 Male, age 76, both hemispheres 638.1
2381 Male, age 80, both hemispheres 628.0
2564 Male, age 74, both hemispheres 610.4
2131 Male, age 76, both hemispheres 488.6
2562 Male, age 61, both hemispheres 468.1
2805 Female, age 91, both hemispheres 408.8
Nucleus gracilis
nTPM: 671.8
2382 Male, age 80, both hemispheres 778.1
2627 Male, age 74, both hemispheres 673.4
2299 Female, age 85, both hemispheres 564.0
Nucleus raphe magnus
nTPM: 423.2
2459 Female, age 91, both hemispheres 547.3
2051 Male, age 76, both hemispheres 490.6
2455 Male, age 74, both hemispheres 483.5
2328 Male, age 80, both hemispheres 464.1
2160 Male, age 61, both hemispheres 311.2
2172 Female, age 85, both hemispheres 242.8
Nucleus raphe obscurus
nTPM: 926.6
2142 Male, age 76, midline 1068.6
2845 Female, age 85, midline 912.4
2800 Male, age 61, midline 798.8
Nucleus raphe pallidus
nTPM: 842.2
2145 Male, age 76, midline 1063.3
1924 Male, age 61, midline 915.0
2183 Male, age 80, midline 548.2
Nucleus tractus solitarii
nTPM: 423.8
2144 Female, age 91, right hemisphere 588.5
2191 Female, age 85, both hemispheres 426.6
2656 Male, age 76, both hemispheres 377.9
2307 Male, age 80, both hemispheres 302.2
Paramedian reticular nucleus
nTPM: 554.2
2057 Male, age 80, both hemispheres 670.0
2052 Male, age 76, both hemispheres 640.0
2050 Female, age 85, both hemispheres 479.2
2313 Male, age 61, both hemispheres 427.8
Parvicellular reticular nuclei
nTPM: 536.6
2119 Male, age 80, both hemispheres 636.9
2095 Male, age 76, both hemispheres 627.9
2558 Male, age 74, both hemispheres 345.2
Parvicellular reticular nuclei, medullary
nTPM: 458.8
2091 Female, age 85, both hemispheres 477.0
2189 Female, age 91, both hemispheres 475.5
2181 Male, age 80, left hemisphere 423.9
Pedunculopontine tegmental nucleus
nTPM: 465.3
2334 Male, age 80, both hemispheres 488.6
1921 Female, age 85, both hemispheres 467.8
2338 Male, age 61, both hemispheres 439.3
Peritrigeminal nucleus
nTPM: 704.5
2067 Female, age 85, both hemispheres 784.3
2136 Male, age 76, both hemispheres 729.8
2179 Male, age 61, both hemispheres 599.5
Pontine nuclei
nTPM: 523.1
2454 Male, age 74, left hemisphere 715.9
2109 Female, age 72, unknown 583.9
2319 Female, age 91, both hemispheres 575.7
2115 Male, age 80, left hemisphere 509.5
1863 Male, age 55, unknown 509.0
1968 Male, age 76, left hemisphere 495.4
2727 Male, age 61, right hemisphere 449.7
2787 Female, age 85, both hemispheres 345.3
Pontine raphe nucleus
nTPM: 397.6
2122 Female, age 85, midline 404.6
2853 Male, age 76, midline 390.5
Posteroventral cochlear nucleus
nTPM: 622.0
2341 Male, age 80, both hemispheres 754.6
2135 Female, age 91, both hemispheres 733.7
2070 Male, age 76, both hemispheres 605.5
2371 Male, age 61, both hemispheres 556.7
2752 Female, age 85, both hemispheres 459.4
Prepositus hypoglossal nucleus
nTPM: 634.2
2855 Female, age 85, right hemisphere 778.0
2086 Male, age 80, both hemispheres 490.4
Principal sensory trigeminal nucleus
nTPM: 433.1
2367 Female, age 91, left hemisphere 548.7
2008 Male, age 80, left hemisphere 419.8
2324 Male, age 76, both hemispheres 418.6
2158 Male, age 61, both hemispheres 345.1
Reticular pontine nucleus, caudal
nTPM: 552.8
2457 Female, age 91, both hemispheres 620.8
2092 Male, age 76, both hemispheres 610.3
2559 Male, age 74, both hemispheres 605.3
2332 Male, age 80, right hemisphere 375.0
Reticular pontine nucleus, oral
nTPM: 610.4
2361 Male, age 74, both hemispheres 794.8
1939 Male, age 80, both hemispheres 634.4
2366 Female, age 91, both hemispheres 560.6
2012 Female, age 85, both hemispheres 552.6
2167 Male, age 76, both hemispheres 509.8
Reticulotegmental nucleus
nTPM: 451.5
2322 Female, age 91, both hemispheres 563.0
2333 Male, age 80, both hemispheres 497.7
2452 Male, age 74, both hemispheres 437.6
2325 Male, age 76, both hemispheres 307.7
Spinal trigeminal nucleus, caudal
nTPM: 548.2
2312 Male, age 61, both hemispheres 664.6
2308 Male, age 80, both hemispheres 599.9
2447 Male, age 76, both hemispheres 578.9
2642 Male, age 74, both hemispheres 464.4
2390 Female, age 91, both hemispheres 433.2
Spinal trigeminal nucleus, interpolar
nTPM: 444.8
2386 Female, age 85, both hemispheres 505.6
2066 Male, age 76, right hemisphere 465.1
2033 Male, age 80, both hemispheres 460.6
2389 Female, age 91, both hemispheres 448.9
2625 Male, age 61, both hemispheres 343.5
Spinal trigeminal nucleus, oral
nTPM: 471.0
1978 Male, age 76, both hemispheres 505.8
2164 Male, age 80, both hemispheres 472.2
2737 Female, age 85, both hemispheres 435.1
Spinal vestibular nucleus
nTPM: 524.7
2748 Male, age 76, both hemispheres 654.4
2806 Female, age 85, both hemispheres 584.3
2384 Male, age 74, both hemispheres 530.7
2186 Female, age 91, both hemispheres 516.9
2780 Male, age 80, both hemispheres 490.0
2796 Male, age 61, both hemispheres 372.1
Subcoeruleus area
nTPM: 514.8
2369 Female, age 85, left hemisphere 912.1
1958 Male, age 80, both hemispheres 477.5
2089 Male, age 76, left hemisphere 449.7
2451 Male, age 74, both hemispheres 400.0
2323 Female, age 91, left hemisphere 334.7
Superior olive
nTPM: 539.9
2364 Male, age 74, right hemisphere 724.1
2020 Male, age 76, both hemispheres 631.6
2329 Male, age 80, right hemisphere 467.0
1875 Female, age 85, both hemispheres 440.2
2561 Female, age 91, both hemispheres 436.9
Superior vestibular nucleus
nTPM: 637.2
2383 Male, age 74, both hemispheres 678.5
2061 Male, age 76, both hemispheres 620.8
2015 Male, age 80, both hemispheres 612.4
Ventral medullary reticular nucleus
nTPM: 728.8
2372 Male, age 61, both hemispheres 823.3
2060 Male, age 76, both hemispheres 634.3
Ventral periolivary nuclei
nTPM: 457.3
2023 Male, age 76, both hemispheres 726.2
2165 Male, age 80, both hemispheres 455.0
2794 Female, age 91, left hemisphere 351.7
2130 Female, age 85, both hemispheres 296.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 651.7
2118 Male, age 80, both hemispheres 735.0
2180 Male, age 61, both hemispheres 698.0
1986 Male, age 76, both hemispheres 638.6
2302 Female, age 91, both hemispheres 610.4
2741 Female, age 85, both hemispheres 576.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 514.5
2456 Female, age 91, both hemispheres 618.4
1959 Male, age 76, both hemispheres 517.5
2449 Male, age 74, both hemispheres 500.6
2359 Male, age 61, both hemispheres 495.4
2161 Male, age 80, both hemispheres 490.8
2840 Female, age 85, both hemispheres 464.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1013.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1013.9
FF:10182-103D2 60 years, female 1033.5
FF:10165-103B3 76 years, female 994.3
Medulla oblongata
Scaled Tags Per Million: 877.3
FF:10155-103A2 76 years, female 967.7
FF:10038-101F2 18-64 years, mixed 921.4
FF:10174-103C3 60 years, female 742.8
Pons
Scaled Tags Per Million: 773.3
FF:10033-101E6 18-54 years, mixed 773.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 754.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 755.0
Samples: 4

Max nTPM: 839.5
Min nTPM: 600.3
Sample A Female 839.5
Sample B Female 600.3
Sample C Male 752.1
Sample D Male 827.9
Pons
nTPM: 509.3
Samples: 4

Max nTPM: 644.3
Min nTPM: 414.8
Sample A Female 450.0
Sample B Female 414.8
Sample C Male 527.9
Sample D Male 644.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 496.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 496.7
Samples: 4

Max nTPM: 536.0
Min nTPM: 464.5
Sample A Male 497.0
Sample B Male 464.5
Sample C Female 489.1
Sample D Female 536.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.6
74357593 Antisense, RP_060117_01_A08, Mouse strain C57BL/6J (56 days, male) 8.7
544520 Antisense, RP_040324_01_G06, Mouse strain C57BL/6J (56 days, male) 8.6
Pons
Expression energy: 8.2
544520 Antisense, RP_040324_01_G06, Mouse strain C57BL/6J (56 days, male) 8.5
74357593 Antisense, RP_060117_01_A08, Mouse strain C57BL/6J (56 days, male) 7.9

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