We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HERPUD1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • HERPUD1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:50.5 nTPM
HPA Brain:53.4 nTPM
GTEx:50.5 nTPM
FANTOM5:138.8 Scaled Tags Per Million
Pig:57.7 nTPM
Mouse:52.8 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040754Antibody HPA041219Antibody CAB037041Antibody CAB037104
Glial cells Not detectedLowLowNot detected
Neuronal cells Not detectedLowMediumLow









BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 53.4
2481 Female, age 94, left hemisphere 68.1
2289 Male, age 61, right hemisphere 65.8
1781 Male, age 74, unknown 54.4
2846 Female, age 79, unknown 52.6
1854 Male, age 80, left hemisphere 51.8
1857 Female, age 85, left hemisphere 48.1
2290 Female, age 72, unknown 45.1
2288 Male, age 75, left hemisphere 41.4
Globus pallidus, externus
nTPM: 47.0
2395 Male, age 75, both hemispheres 60.2
2772 Female, age 79, unknown 52.7
1996 Male, age 80, right hemisphere 46.4
2646 Male, age 61, right hemisphere 39.6
2567 Female, age 72, unknown 36.2
Globus pallidus, internus
nTPM: 50.0
2287 Male, age 75, right hemisphere 59.1
1818 Male, age 74, unknown 55.8
2483 Female, age 94, right hemisphere 50.4
2778 Female, age 91, both hemispheres 49.9
2037 Male, age 80, right hemisphere 48.4
2111 Female, age 85, right hemisphere 45.2
2566 Female, age 72, unknown 40.9
Nucleus accumbens
nTPM: 47.5
1856 Female, age 91, right hemisphere 57.6
2391 Female, age 94, left hemisphere 54.4
2698 Female, age 72, unknown 49.0
2286 Male, age 75, left hemisphere 47.4
1806 Female, age 85, left hemisphere 47.1
1783 Male, age 74, unknown 46.7
2732 Male, age 80, right hemisphere 40.5
2824 Male, age 61, right hemisphere 37.8
Nucleus basalis of Meynert
nTPM: 51.5
2821 Male, age 75, both hemispheres 67.3
2393 Male, age 80, right hemisphere 54.5
2569 Male, age 61, both hemispheres 43.6
2484 Female, age 94, left hemisphere 40.8
Nucleus of the diagonal band
nTPM: 37.2
1812 Female, age 91, both hemispheres 46.8
1979 Male, age 74, unknown 40.3
2195 Female, age 85, both hemispheres 39.3
2775 Male, age 80, right hemisphere 32.5
2029 Male, age 61, right hemisphere 27.1
Putamen
nTPM: 46.8
2482 Female, age 94, left hemisphere 57.8
2466 Female, age 79, unknown 51.8
1937 Female, age 91, right hemisphere 46.1
2489 Female, age 72, unknown 46.0
1829 Male, age 74, unknown 43.8
1838 Male, age 80, right hemisphere 43.4
2647 Male, age 75, left hemisphere 38.4
Septal nuclei
nTPM: 42.5
2629 Female, age 94, right hemisphere 64.9
2199 Male, age 80, right hemisphere 51.1
2394 Male, age 61, left hemisphere 44.0
2009 Female, age 91, both hemispheres 40.5
2031 Female, age 72, unknown 34.6
1960 Male, age 74, unknown 32.6
2059 Female, age 85, both hemispheres 30.0
Stria terminalis, bed nucleus
nTPM: 36.4
2486 Female, age 94, both hemispheres 41.8
2201 Male, age 74, unknown 35.1
1974 Female, age 91, both hemispheres 32.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 47.7
Samples: 246

Max nTPM: 169.3
Min nTPM: 21.8
Std nTPM: 18.2
Median nTPM: 42.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 169.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 136.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 134.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 101.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 86.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 84.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 84.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 84.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 82.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 82.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 81.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 80.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 79.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 77.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 76.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 76.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 73.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 71.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 70.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 70.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 70.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 69.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 67.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 67.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 66.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 65.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 65.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 64.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 64.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 64.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 63.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 63.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 62.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 62.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 62.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 62.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 61.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 61.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 61.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 61.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 60.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 59.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 58.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 57.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 57.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 56.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 56.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 56.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 55.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 55.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 55.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 53.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 53.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 53.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 53.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 53.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 52.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 52.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 52.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 51.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 51.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 50.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 50.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 50.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 50.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 49.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 49.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 49.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 48.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 48.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 48.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 47.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 47.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 47.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 47.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 46.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 46.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 46.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 46.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 46.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 46.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 46.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 46.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 45.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 45.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 45.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 45.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 45.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 45.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 45.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 45.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 44.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 44.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 44.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 44.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 43.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 43.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 43.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 43.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 43.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 42.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 42.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 42.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 42.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 42.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 42.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 42.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 42.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 42.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 42.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 41.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 41.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 41.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 41.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 41.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 41.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 40.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 40.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 40.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 40.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 40.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 40.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 40.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 40.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 40.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 40.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 39.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 39.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 39.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 39.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 39.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 38.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 38.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 38.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 38.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 38.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 38.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 38.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 38.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 38.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 38.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 38.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 38.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 37.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 37.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 37.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 37.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 37.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 37.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 37.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 36.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 36.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 36.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 36.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 35.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 35.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 35.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 35.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 35.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 35.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 35.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 35.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 34.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 34.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 34.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 34.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 34.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 34.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 34.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 33.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 33.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 33.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 33.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 33.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 33.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 33.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 33.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 33.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 33.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 33.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 33.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 33.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 32.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 32.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 32.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 32.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 32.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 32.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 31.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 31.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 31.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 30.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 30.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 29.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 29.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 29.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 29.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 29.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 28.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 28.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 27.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 27.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 27.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 24.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 22.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 21.8
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 43.9
Samples: 246

Max nTPM: 179.4
Min nTPM: 20.9
Std nTPM: 21.0
Median nTPM: 38.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 179.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 143.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 141.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 140.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 115.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 104.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 101.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 97.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 96.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 95.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 92.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 87.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 82.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 79.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 79.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 75.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 69.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 64.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 64.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 64.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 64.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 60.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 60.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 60.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 60.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 60.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 59.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 58.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 57.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 57.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 55.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 54.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 54.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 54.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 54.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 53.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 53.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 53.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 53.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 53.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 52.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 52.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 52.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 51.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 51.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 50.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 50.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 50.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 50.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 49.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 49.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 49.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 49.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 49.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 48.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 48.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 48.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 48.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 47.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 47.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 47.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 47.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 47.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 47.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 46.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 46.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 46.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 46.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 46.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 46.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 45.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 45.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 45.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 45.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 45.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 44.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 44.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 44.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 44.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 44.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 44.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 44.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 44.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 44.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 43.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 43.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 43.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 43.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 43.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 43.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 43.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 43.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 43.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 42.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 42.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 41.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 41.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 41.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 41.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 41.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 40.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 40.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 40.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 40.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 40.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 40.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 40.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 39.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 39.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 39.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 39.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 39.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 39.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 39.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 39.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 38.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 38.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 38.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 38.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 38.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 37.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 37.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 37.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 37.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 37.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 37.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 37.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 37.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 37.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 37.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 37.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 36.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 36.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 36.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 36.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 36.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 36.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 36.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 36.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 36.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 35.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 35.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 35.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 34.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 34.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 34.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 34.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 34.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 34.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 34.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 34.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 34.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 34.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 33.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 33.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 33.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 33.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 33.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 33.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 33.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 33.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 33.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 33.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 33.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 33.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 32.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 32.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 32.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 32.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 32.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 32.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 32.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 32.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 32.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 32.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 31.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 31.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 31.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 31.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 31.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 31.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 31.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 31.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 31.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 31.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 31.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 31.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 31.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 31.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 31.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 31.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 31.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 30.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 30.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 30.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 30.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 30.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 30.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 30.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 29.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 29.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 29.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 29.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 29.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 29.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 28.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 28.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 28.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 28.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 28.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 28.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 28.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 28.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 27.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 27.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 27.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 27.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 27.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 27.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 26.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 26.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 26.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 26.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 26.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 26.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 25.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 25.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 25.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 25.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 25.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 24.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 24.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 24.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 24.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 23.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 23.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 22.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 22.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 22.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 20.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 50.5
Samples: 205

Max nTPM: 172.6
Min nTPM: 18.8
Std nTPM: 20.3
Median nTPM: 44.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 172.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 149.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 110.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 109.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 109.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 106.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 101.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 98.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 97.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 94.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 93.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 93.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 85.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 84.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 81.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 79.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 79.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 74.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 73.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 73.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 72.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 71.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 69.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 69.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 68.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 67.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 67.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 67.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 67.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 65.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 65.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 65.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 64.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 63.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 63.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 63.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 62.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 62.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 62.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 61.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 61.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 60.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 59.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 59.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 59.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 58.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 58.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 58.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 57.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 57.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 57.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 56.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 56.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 56.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 55.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 55.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 54.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 54.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 54.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 54.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 53.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 53.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 53.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 53.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 53.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 53.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 53.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 52.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 52.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 51.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 51.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 50.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 50.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 50.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 50.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 50.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 50.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 50.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 50.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 50.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 50.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 49.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 49.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 48.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 47.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 47.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 46.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 46.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 46.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 46.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 45.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 45.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 45.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 44.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 44.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 44.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 44.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 44.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 44.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 43.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 43.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 43.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 43.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 43.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 43.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 42.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 42.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 42.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 42.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 42.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 41.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 41.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 41.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 41.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 41.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 40.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 40.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 40.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 40.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 40.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 40.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 40.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 40.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 39.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 39.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 39.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 39.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 39.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 39.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 39.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 39.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 39.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 38.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 38.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 38.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 38.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 38.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 38.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 38.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 38.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 38.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 37.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 37.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 37.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 37.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 37.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 37.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 37.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 37.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 37.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 36.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 36.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 36.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 36.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 36.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 36.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 36.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 35.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 35.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 35.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 35.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 35.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 35.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 35.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 35.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 35.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 35.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 35.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 35.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 34.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 34.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 34.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 34.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 33.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 33.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 32.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 32.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 32.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 32.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 32.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 32.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 31.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 31.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 30.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 30.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 30.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 30.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 29.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 29.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 25.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 23.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 23.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 18.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

138.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 138.8
FF:10164-103B2 76 years, female 138.8
Nucleus accumbens
Scaled Tags Per Million: 106.7
FF:10037-101F1 23-56 years, mixed 106.7
Putamen
Scaled Tags Per Million: 96.8
FF:10176-103C5 60 years, female 96.8
Globus pallidus
Scaled Tags Per Million: 127.3
FF:10161-103A8 76 years, female 158.0
FF:10175-103C4 60 years, female 96.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.7
Pig sample Sample description nTPM
Caudate
nTPM: 47.0
Samples: 4

Max nTPM: 53.7
Min nTPM: 44.3
Sample A Female 44.3
Sample B Female 45.1
Sample C Male 53.7
Sample D Male 45.0
Putamen
nTPM: 48.6
Samples: 4

Max nTPM: 64.3
Min nTPM: 38.1
Sample A Female 38.1
Sample B Female 41.7
Sample C Male 64.3
Sample D Male 50.4
Septum
nTPM: 57.7
Samples: 4

Max nTPM: 73.3
Min nTPM: 47.4
Sample A Female 51.4
Sample B Female 47.4
Sample C Male 73.3
Sample D Male 58.8
Ventral pallidum
nTPM: 44.4
Samples: 4

Max nTPM: 45.4
Min nTPM: 42.3
Sample A Female 44.7
Sample B Female 42.3
Sample C Male 45.4
Sample D Male 45.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 43.8
Samples: 4

Max nTPM: 44.4
Min nTPM: 43.4
Sample A Male 44.4
Sample B Male 43.4
Sample C Female 43.7
Sample D Female 43.7
Septum
nTPM: 52.8
Samples: 4

Max nTPM: 57.6
Min nTPM: 48.4
Sample A Male 48.4
Sample B Male 52.8
Sample C Female 57.6
Sample D Female 52.4
Ventral forebrain
nTPM: 49.7
Samples: 4

Max nTPM: 56.1
Min nTPM: 45.8
Sample A Male 45.8
Sample B Male 49.4
Sample C Female 56.1
Sample D Female 47.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.7
686221 Antisense, RP_040916_01_C07, Mouse strain C57BL/6J (56 days, male) 6.7
Pallidum
Expression energy: 7.9
686221 Antisense, RP_040916_01_C07, Mouse strain C57BL/6J (56 days, male) 7.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org