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LAMA3
HPA
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  • LAMA3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

LAMA3
Synonyms BM600-150kDa, epiligrin, kalinin-165kDa, LAMNA, nicein-150kDa
Gene descriptioni

Full gene name according to HGNC.

Laminin subunit alpha 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 18
Cytoband q11.2
Chromosome location (bp) 23689453 - 23956222
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000053747 (version 109)
Entrez gene 3909
HGNC HGNC:6483
UniProt Q16787 (UniProt - Evidence at protein level)
neXtProt NX_Q16787
GeneCards LAMA3
Antibodypedia LAMA3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell adhesion
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene belongs to the laminin family of secreted molecules. Laminins are heterotrimeric molecules that consist of alpha, beta, and gamma subunits that assemble through a coiled-coil domain. Laminins are essential for formation and function of the basement membrane and have additional functions in regulating cell migration and mechanical signal transduction. This gene encodes an alpha subunit and is responsive to several epithelial-mesenchymal regulators including keratinocyte growth factor, epidermal growth factor and insulin-like growth factor. Mutations in this gene have been identified as the cause of Herlitz type junctional epidermolysis bullosa and laryngoonychocutaneous syndrome. Alternative splicing and alternative promoter usage result in multiple transcript variants. [provided by RefSeq, Dec 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
LAMA3-201
ENSP00000269217
ENST00000269217
Q16787
[Direct mapping] Laminin subunit alpha-3
Show all
A0A0A6YYF2
[Direct mapping] HCG1811249, isoform CRA_e; Laminin subunit alpha-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001738 [morphogenesis of a polarized epithelium]
GO:0005102 [signaling receptor binding]
GO:0005178 [integrin binding]
GO:0005198 [structural molecule activity]
GO:0005201 [extracellular matrix structural constituent]
GO:0005576 [extracellular region]
GO:0005604 [basement membrane]
GO:0005610 [laminin-5 complex]
GO:0005783 [endoplasmic reticulum]
GO:0007155 [cell adhesion]
GO:0007229 [integrin-mediated signaling pathway]
GO:0007411 [axon guidance]
GO:0008544 [epidermis development]
GO:0009887 [animal organ morphogenesis]
GO:0009888 [tissue development]
GO:0016477 [cell migration]
GO:0030155 [regulation of cell adhesion]
GO:0030334 [regulation of cell migration]
GO:0035987 [endodermal cell differentiation]
GO:0045995 [regulation of embryonic development]
GO:0062023 [collagen-containing extracellular matrix]
GO:0070062 [extracellular exosome]
GO:0098609 [cell-cell adhesion]
Show all
1724 aa
190.5 kDa
Yes 0
LAMA3-202
ENSP00000324532
ENST00000313654
Q16787
[Direct mapping] Laminin subunit alpha-3
Show all
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001738 [morphogenesis of a polarized epithelium]
GO:0005102 [signaling receptor binding]
GO:0005178 [integrin binding]
GO:0005198 [structural molecule activity]
GO:0005201 [extracellular matrix structural constituent]
GO:0005576 [extracellular region]
GO:0005604 [basement membrane]
GO:0005608 [laminin-3 complex]
GO:0005610 [laminin-5 complex]
GO:0005783 [endoplasmic reticulum]
GO:0005912 [adherens junction]
GO:0007155 [cell adhesion]
GO:0007229 [integrin-mediated signaling pathway]
GO:0007411 [axon guidance]
GO:0008544 [epidermis development]
GO:0009887 [animal organ morphogenesis]
GO:0009888 [tissue development]
GO:0016477 [cell migration]
GO:0030056 [hemidesmosome]
GO:0030155 [regulation of cell adhesion]
GO:0030334 [regulation of cell migration]
GO:0031581 [hemidesmosome assembly]
GO:0035987 [endodermal cell differentiation]
GO:0045995 [regulation of embryonic development]
GO:0062023 [collagen-containing extracellular matrix]
GO:0070062 [extracellular exosome]
GO:0098609 [cell-cell adhesion]
Show all
3333 aa
366.6 kDa
Yes 0
LAMA3-203
ENSP00000382432
ENST00000399516
Q16787
[Direct mapping] Laminin subunit alpha-3
Show all
A0A0A0MSA0
[Direct mapping] Laminin subunit alpha-3
Show all
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001738 [morphogenesis of a polarized epithelium]
GO:0005102 [signaling receptor binding]
GO:0005178 [integrin binding]
GO:0005198 [structural molecule activity]
GO:0005201 [extracellular matrix structural constituent]
GO:0005576 [extracellular region]
GO:0005604 [basement membrane]
GO:0005610 [laminin-5 complex]
GO:0005783 [endoplasmic reticulum]
GO:0007155 [cell adhesion]
GO:0007229 [integrin-mediated signaling pathway]
GO:0007411 [axon guidance]
GO:0008544 [epidermis development]
GO:0009887 [animal organ morphogenesis]
GO:0009888 [tissue development]
GO:0016477 [cell migration]
GO:0030155 [regulation of cell adhesion]
GO:0030334 [regulation of cell migration]
GO:0035987 [endodermal cell differentiation]
GO:0045995 [regulation of embryonic development]
GO:0062023 [collagen-containing extracellular matrix]
GO:0070062 [extracellular exosome]
GO:0098609 [cell-cell adhesion]
Show all
3277 aa
360.2 kDa
Yes 0
LAMA3-206
ENSP00000464836
ENST00000586751
K7EIP4
[Direct mapping] Laminin subunit alpha-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005102 [signaling receptor binding]
GO:0005576 [extracellular region]
GO:0005783 [endoplasmic reticulum]
GO:0007155 [cell adhesion]
GO:0030155 [regulation of cell adhesion]
GO:0030334 [regulation of cell migration]
GO:0045995 [regulation of embryonic development]
Show all
1147 aa
128.2 kDa
No 0
LAMA3-207
ENSP00000466557
ENST00000587184
Q16787
[Direct mapping] Laminin subunit alpha-3
Show all
A0A0A0MTS5
[Direct mapping] HCG1811249, isoform CRA_f; Laminin subunit alpha-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001738 [morphogenesis of a polarized epithelium]
GO:0005102 [signaling receptor binding]
GO:0005178 [integrin binding]
GO:0005198 [structural molecule activity]
GO:0005201 [extracellular matrix structural constituent]
GO:0005576 [extracellular region]
GO:0005604 [basement membrane]
GO:0005610 [laminin-5 complex]
GO:0005783 [endoplasmic reticulum]
GO:0007155 [cell adhesion]
GO:0007229 [integrin-mediated signaling pathway]
GO:0007411 [axon guidance]
GO:0008544 [epidermis development]
GO:0009887 [animal organ morphogenesis]
GO:0009888 [tissue development]
GO:0016477 [cell migration]
GO:0030155 [regulation of cell adhesion]
GO:0030334 [regulation of cell migration]
GO:0035987 [endodermal cell differentiation]
GO:0045995 [regulation of embryonic development]
GO:0062023 [collagen-containing extracellular matrix]
GO:0070062 [extracellular exosome]
GO:0098609 [cell-cell adhesion]
Show all
1668 aa
184 kDa
Yes 0
LAMA3-208
ENSP00000468315
ENST00000588004
K7ERM0
[Direct mapping] Laminin subunit alpha-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Protein evidence (Ezkurdia et al 2014)
Show all
134 aa
14.2 kDa
No 0
LAMA3-209
ENSP00000467473
ENST00000588164
K7EPP3
[Direct mapping] Laminin subunit alpha-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Protein evidence (Ezkurdia et al 2014)
Show all
94 aa
10.3 kDa
No 0
LAMA3-211
ENSP00000466658
ENST00000590104
K7EMU9
[Direct mapping] Laminin subunit alpha-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Protein evidence (Ezkurdia et al 2014)
Show all
37 aa
3.8 kDa
No 0
LAMA3-214
ENSP00000467662
ENST00000592519
K7EQ42
[Direct mapping] Laminin subunit alpha-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Protein evidence (Ezkurdia et al 2014)
Show all
59 aa
6.4 kDa
No 0
LAMA3-215
ENSP00000497885
ENST00000649721
A0A3B3ITG1
[Direct mapping] Laminin subunit alpha-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of skin
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005102 [signaling receptor binding]
GO:0005576 [extracellular region]
GO:0005604 [basement membrane]
GO:0005783 [endoplasmic reticulum]
GO:0007155 [cell adhesion]
GO:0030155 [regulation of cell adhesion]
GO:0030334 [regulation of cell migration]
GO:0045995 [regulation of embryonic development]
Show all
2198 aa
242.2 kDa
No 0

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