HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:34.9 nTPM
HPA Brain:29.7 nTPM
GTEx:34.9 nTPM
FANTOM5:53.8 Scaled Tags Per Million
Pig:61.7 nTPM
Mouse:86.8 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028408
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 29.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1898 Male, age 80, left hemisphere 32.1
1855 Male, age 76, left hemisphere 28.6
2148 Female, age 91, left hemisphere 27.0
2621 Female, age 67, right hemisphere 23.4
1911 Female, age 85, right hemisphere 22.7
2529 Female, age 94, left hemisphere 22.3
Dentate gyrus
nTPM: 26.4
2528 Male, age 74, both hemispheres 29.1
1927 Female, age 91, both hemispheres 28.1
2010 Male, age 76, both hemispheres 28.0
2531 Female, age 67, both hemispheres 24.5
2246 Female, age 85, both hemispheres 24.4
2530 Female, age 94, left hemisphere 24.2
Entorhinal gyrus
nTPM: 25.2
2764 Male, age 80, right hemisphere 30.6
1938 Female, age 85, left hemisphere 26.4
1787 Male, age 76, left hemisphere 26.1
2117 Female, age 91, right hemisphere 25.9
2686 Male, age 75, right hemisphere 22.7
2613 Female, age 94, left hemisphere 19.5
Hippocampus, CA1
nTPM: 29.0
2749 Male, age 80, left hemisphere 37.3
2045 Male, age 76, both hemispheres 27.7
2082 Female, age 91, right hemisphere 27.0
2527 Male, age 74, both hemispheres 27.0
1873 Female, age 85, both hemispheres 25.9
Hippocampus, CA2
nTPM: 27.6
1963 Male, age 80, left hemisphere 32.3
1892 Male, age 76, both hemispheres 29.7
2249 Male, age 74, both hemispheres 28.5
1940 Female, age 85, left hemisphere 28.1
2113 Female, age 91, right hemisphere 25.4
2437 Female, age 94, left hemisphere 21.8
Hippocampus, CA3
nTPM: 28.0
2436 Male, age 74, both hemispheres 31.1
2620 Female, age 94, left hemisphere 30.0
2137 Male, age 80, left hemisphere 28.8
1867 Male, age 76, both hemispheres 28.5
1891 Female, age 85, both hemispheres 28.1
2861 Female, age 67, both hemispheres 21.7
Parahippocampal cortex
nTPM: 25.2
1850 Male, age 80, both hemispheres 30.9
1990 Female, age 91, right hemisphere 26.8
2018 Male, age 76, both hemispheres 26.6
2250 Female, age 67, right hemisphere 25.8
1933 Female, age 85, both hemispheres 25.5
2693 Female, age 94, both hemispheres 25.0
2245 Female, age 91, both hemispheres 24.0
2532 Female, age 72, left hemisphere 23.1
2692 Male, age 74, both hemispheres 22.6
2622 Female, age 67, right hemisphere 21.8
Perirhinal gyrus
nTPM: 29.7
1794 Male, age 80, right hemisphere 34.9
1847 Female, age 91, left hemisphere 33.4
1841 Female, age 85, right hemisphere 29.7
2521 Female, age 94, right hemisphere 26.8
2848 Male, age 76, right hemisphere 23.9
Subiculum
nTPM: 25.8
1977 Female, age 85, both hemispheres 29.6
1901 Male, age 80, both hemispheres 28.4
2729 Female, age 91, right hemisphere 26.1
2619 Male, age 74, both hemispheres 24.1
2438 Female, age 94, left hemisphere 23.8
2042 Male, age 76, both hemispheres 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 57.5
Min nTPM: 22.3
Std nTPM: 5.9
Median nTPM: 33.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 57.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 49.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 49.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 48.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 48.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 48.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 46.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 46.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 45.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.8
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 49.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 61.7
Pig sample Sample description nTPM
Subiculum
nTPM: 50.8
Samples: 4

Max nTPM: 69.6
Min nTPM: 39.3
Sample A Female 69.6
Sample B Female 47.6
Sample C Male 39.3
Sample D Male 46.8
Dorsal hippocampus
nTPM: 61.7
Samples: 4

Max nTPM: 79.0
Min nTPM: 53.3
Sample A Female 79.0
Sample B Female 59.7
Sample C Male 54.9
Sample D Male 53.3
Entorhinal cortex
nTPM: 52.7
Samples: 4

Max nTPM: 64.4
Min nTPM: 44.1
Sample A Female 57.3
Sample B Female 64.4
Sample C Male 45.0
Sample D Male 44.1
Ventral hippocampus
nTPM: 53.7
Samples: 4

Max nTPM: 57.8
Min nTPM: 46.1
Sample A Female 57.8
Sample B Female 46.1
Sample C Male 54.1
Sample D Male 56.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 86.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.9
Samples: 4

Max nTPM: 86.1
Min nTPM: 77.0
Sample A Male 82.7
Sample B Male 86.1
Sample C Female 85.6
Sample D Female 77.0
Hippocampal formation
nTPM: 86.8
Samples: 4

Max nTPM: 95.0
Min nTPM: 80.7
Sample A Male 95.0
Sample B Male 84.7
Sample C Female 80.7
Sample D Female 86.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
513234 Antisense, RP_040810_01_D01, Mouse strain C57BL/6J (56 days, male) 4.6
75931524 Antisense, RP_060606_01_B03, Mouse strain C57BL/6J (56 days, male) 0.5

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