PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:300.7 nTPM
FANTOM5:372.6 Scaled Tags Per Million
Pig:177.5 nTPM
Mouse:124.3 nTPM
Allen mouse:1.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 300.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 257.0
2301 Female, age 85, both hemispheres 274.7
2188 Female, age 91, both hemispheres 262.4
1984 Male, age 76, both hemispheres 252.7
2090 Male, age 80, both hemispheres 238.2
Area postrema
nTPM: 205.5
2306 Male, age 80, both hemispheres 218.8
2054 Male, age 76, both hemispheres 209.7
2799 Male, age 61, both hemispheres 187.9
Dorsal cochlear nucleus
nTPM: 247.3
2802 Male, age 74, right hemisphere 260.7
2187 Female, age 91, both hemispheres 257.0
2370 Male, age 61, both hemispheres 241.8
2058 Male, age 76, both hemispheres 239.6
2378 Male, age 80, both hemispheres 237.5
Dorsal medullary reticular nucleus
nTPM: 251.6
2040 Female, age 85, both hemispheres 264.8
2373 Male, age 61, both hemispheres 252.0
2088 Male, age 76, both hemispheres 238.1
Dorsal motor vagal complex
nTPM: 235.8
2844 Male, age 55, unknown 255.0
2797 Male, age 61, both hemispheres 254.1
2000 Male, age 74, unknown 246.9
2133 Female, age 91, both hemispheres 241.6
2185 Male, age 76, both hemispheres 235.9
2813 Female, age 72, unknown 231.9
2643 Male, age 74, both hemispheres 229.1
2807 Female, age 85, both hemispheres 191.8
Dorsal tegmental nucleus
nTPM: 218.9
2083 Male, age 80, both hemispheres 247.6
2326 Male, age 74, both hemispheres 236.9
1936 Male, age 76, left hemisphere 215.4
2358 Male, age 61, both hemispheres 175.6
Dorsolateral tegmental area
nTPM: 223.6
2654 Male, age 80, both hemispheres 259.2
2751 Female, age 85, both hemispheres 256.8
2141 Male, age 76, both hemispheres 226.0
2360 Male, age 74, both hemispheres 217.4
2337 Male, age 61, both hemispheres 158.4
Gigantocellular reticular nuclei, medullary
nTPM: 260.8
2387 Female, age 91, both hemispheres 304.8
2314 Male, age 61, both hemispheres 276.2
2310 Male, age 80, both hemispheres 268.7
1876 Female, age 85, both hemispheres 249.7
2462 Male, age 74, both hemispheres 243.8
2022 Male, age 76, right hemisphere 221.4
Gigantocellular reticular nuclei, pars
nTPM: 267.1
2168 Male, age 76, both hemispheres 320.3
2336 Male, age 61, both hemispheres 270.2
2330 Male, age 80, both hemispheres 256.6
2706 Male, age 80, both hemispheres 250.6
2084 Female, age 85, both hemispheres 238.0
Inferior olive
nTPM: 242.5
2178 Male, age 61, both hemispheres 264.6
2628 Female, age 91, both hemispheres 261.6
2563 Male, age 74, both hemispheres 247.9
2085 Female, age 85, both hemispheres 221.6
2379 Male, age 80, both hemispheres 216.9
Kolliker-Fuse nucleus
nTPM: 252.3
2793 Female, age 91, left hemisphere 302.9
2163 Male, age 80, both hemispheres 250.2
2315 Male, age 76, right hemisphere 203.8
Lateral lemniscal nuclei
nTPM: 298.3
2036 Male, age 80, both hemispheres 355.8
2169 Male, age 76, both hemispheres 310.4
2320 Female, age 91, left hemisphere 298.2
2746 Female, age 85, left hemisphere 268.4
2453 Male, age 74, right hemisphere 258.8
Lateral medullary reticular nucleus
nTPM: 242.2
2044 Male, age 76, both hemispheres 264.7
2852 Male, age 80, both hemispheres 249.1
2374 Male, age 61, both hemispheres 243.5
2804 Female, age 91, both hemispheres 240.0
2305 Male, age 74, both hemispheres 231.0
2190 Female, age 85, both hemispheres 224.7
Lateral parabrachial nucleus
nTPM: 260.5
2792 Male, age 76, both hemispheres 273.2
2139 Female, age 85, right hemisphere 264.8
2013 Male, age 80, both hemispheres 259.2
2790 Male, age 61, both hemispheres 245.0
Lateral vestibular nucleus
nTPM: 245.0
2184 Male, age 76, both hemispheres 252.4
2311 Male, age 80, both hemispheres 237.6
Locus coeruleus
nTPM: 266.0
2014 Male, age 55, unknown 307.1
2317 Female, age 72, unknown 281.5
2788 Male, age 74, unknown 261.4
2123 Female, age 91, both hemispheres 259.3
2162 Male, age 80, both hemispheres 256.8
2720 Male, age 74, both hemispheres 253.6
1980 Male, age 76, both hemispheres 242.4
Medial olivary nucleus
nTPM: 240.0
2138 Female, age 91, both hemispheres 248.8
1962 Male, age 76, both hemispheres 238.7
2851 Male, age 80, both hemispheres 237.0
1943 Male, age 61, both hemispheres 235.4
Medial parabrachial nucleus
nTPM: 249.3
2854 Male, age 80, both hemispheres 262.9
2170 Female, age 91, both hemispheres 260.4
2463 Female, age 85, right hemisphere 251.6
2156 Male, age 61, both hemispheres 236.6
2786 Male, age 76, both hemispheres 235.1
Medial periolivary nuclei
nTPM: 276.6
2063 Male, age 76, both hemispheres 306.7
2171 Female, age 85, both hemispheres 301.2
2458 Female, age 91, both hemispheres 265.8
2791 Male, age 74, right hemisphere 256.0
2081 Male, age 80, both hemispheres 253.3
Medial vestibular nucleus
nTPM: 259.2
2803 Female, age 91, both hemispheres 288.1
2624 Male, age 61, both hemispheres 283.1
2093 Male, age 80, both hemispheres 257.7
2801 Male, age 74, both hemispheres 255.3
2743 Female, age 85, both hemispheres 239.9
2134 Male, age 76, both hemispheres 231.3
Motor facial nucleus
nTPM: 283.3
2062 Male, age 76, both hemispheres 306.3
2327 Male, age 80, both hemispheres 299.3
2795 Female, age 91, both hemispheres 289.2
2126 Male, age 61, both hemispheres 277.1
2697 Female, age 85, both hemispheres 269.3
2365 Male, age 74, right hemisphere 258.6
Motor hypoglossal nucleus
nTPM: 245.5
2125 Female, age 91, both hemispheres 278.0
2461 Male, age 61, both hemispheres 252.5
2132 Female, age 85, both hemispheres 247.0
2182 Male, age 80, both hemispheres 242.1
2277 Male, age 76, both hemispheres 207.8
Motor trigeminal nucleus
nTPM: 253.8
2079 Male, age 80, both hemispheres 270.8
2321 Female, age 91, both hemispheres 266.8
2560 Male, age 74, both hemispheres 253.3
2309 Male, age 76, both hemispheres 248.0
2335 Male, age 61, both hemispheres 229.9
Nuclei of the trapezoid body
nTPM: 300.7
2159 Male, age 61, both hemispheres 357.8
2735 Female, age 85, both hemispheres 296.2
2368 Female, age 91, both hemispheres 293.1
2166 Male, age 80, both hemispheres 285.0
1983 Male, age 76, both hemispheres 271.6
Nucleus ambiguus
nTPM: 227.3
2071 Male, age 76, both hemispheres 240.4
2096 Female, age 85, both hemispheres 214.2
Nucleus cuneatus
nTPM: 253.7
2376 Male, age 61, both hemispheres 296.4
2100 Male, age 76, both hemispheres 261.3
2805 Female, age 91, both hemispheres 260.8
2562 Male, age 61, both hemispheres 258.3
2380 Male, age 80, both hemispheres 252.0
2131 Male, age 76, both hemispheres 251.8
2381 Male, age 80, both hemispheres 247.6
2564 Male, age 74, both hemispheres 244.9
2808 Female, age 85, both hemispheres 209.9
Nucleus gracilis
nTPM: 229.7
2382 Male, age 80, both hemispheres 246.6
2627 Male, age 74, both hemispheres 233.2
2299 Female, age 85, both hemispheres 209.1
Nucleus raphe magnus
nTPM: 292.4
2160 Male, age 61, both hemispheres 355.2
2328 Male, age 80, both hemispheres 296.8
2172 Female, age 85, both hemispheres 293.2
2459 Female, age 91, both hemispheres 284.2
2051 Male, age 76, both hemispheres 264.8
2455 Male, age 74, both hemispheres 259.9
Nucleus raphe obscurus
nTPM: 252.8
2800 Male, age 61, midline 266.0
2845 Female, age 85, midline 255.5
2142 Male, age 76, midline 236.9
Nucleus raphe pallidus
nTPM: 237.4
2183 Male, age 80, midline 243.9
2145 Male, age 76, midline 243.8
1924 Male, age 61, midline 224.5
Nucleus tractus solitarii
nTPM: 210.2
2656 Male, age 76, both hemispheres 235.2
2144 Female, age 91, right hemisphere 234.4
2307 Male, age 80, both hemispheres 187.5
2191 Female, age 85, both hemispheres 183.8
Paramedian reticular nucleus
nTPM: 267.5
2313 Male, age 61, both hemispheres 286.3
2050 Female, age 85, both hemispheres 283.4
2057 Male, age 80, both hemispheres 265.4
2052 Male, age 76, both hemispheres 234.7
Parvicellular reticular nuclei
nTPM: 258.2
2095 Male, age 76, both hemispheres 262.2
2119 Male, age 80, both hemispheres 259.2
2558 Male, age 74, both hemispheres 253.1
Parvicellular reticular nuclei, medullary
nTPM: 244.5
2189 Female, age 91, both hemispheres 264.6
2181 Male, age 80, left hemisphere 239.4
2091 Female, age 85, both hemispheres 229.5
Pedunculopontine tegmental nucleus
nTPM: 232.3
2334 Male, age 80, both hemispheres 257.6
1921 Female, age 85, both hemispheres 248.0
2338 Male, age 61, both hemispheres 191.4
Peritrigeminal nucleus
nTPM: 251.7
2179 Male, age 61, both hemispheres 285.6
2136 Male, age 76, both hemispheres 249.2
2067 Female, age 85, both hemispheres 220.5
Pontine nuclei
nTPM: 296.7
2727 Male, age 61, right hemisphere 365.9
1863 Male, age 55, unknown 343.3
2109 Female, age 72, unknown 301.7
1968 Male, age 76, left hemisphere 287.4
2454 Male, age 74, left hemisphere 281.3
2787 Female, age 85, both hemispheres 278.1
2319 Female, age 91, both hemispheres 273.3
2115 Male, age 80, left hemisphere 242.4
Pontine raphe nucleus
nTPM: 250.6
2122 Female, age 85, midline 269.1
2853 Male, age 76, midline 232.2
Posteroventral cochlear nucleus
nTPM: 250.2
2070 Male, age 76, both hemispheres 255.0
2371 Male, age 61, both hemispheres 253.3
2135 Female, age 91, both hemispheres 251.0
2752 Female, age 85, both hemispheres 249.7
2341 Male, age 80, both hemispheres 242.1
Prepositus hypoglossal nucleus
nTPM: 233.3
2855 Female, age 85, right hemisphere 256.7
2086 Male, age 80, both hemispheres 210.0
Principal sensory trigeminal nucleus
nTPM: 283.2
2158 Male, age 61, both hemispheres 333.8
2008 Male, age 80, left hemisphere 279.1
2367 Female, age 91, left hemisphere 274.6
2324 Male, age 76, both hemispheres 245.4
Reticular pontine nucleus, caudal
nTPM: 274.0
2332 Male, age 80, right hemisphere 307.9
2092 Male, age 76, both hemispheres 278.5
2457 Female, age 91, both hemispheres 262.3
2559 Male, age 74, both hemispheres 247.2
Reticular pontine nucleus, oral
nTPM: 266.1
2366 Female, age 91, both hemispheres 289.6
2012 Female, age 85, both hemispheres 281.5
2361 Male, age 74, both hemispheres 271.4
1939 Male, age 80, both hemispheres 251.1
2167 Male, age 76, both hemispheres 236.9
Reticulotegmental nucleus
nTPM: 266.6
2322 Female, age 91, both hemispheres 278.8
2333 Male, age 80, both hemispheres 273.3
2325 Male, age 76, both hemispheres 258.6
2452 Male, age 74, both hemispheres 255.7
Spinal trigeminal nucleus, caudal
nTPM: 251.6
2390 Female, age 91, both hemispheres 286.4
2312 Male, age 61, both hemispheres 259.4
2447 Male, age 76, both hemispheres 251.9
2308 Male, age 80, both hemispheres 240.0
2642 Male, age 74, both hemispheres 220.4
Spinal trigeminal nucleus, interpolar
nTPM: 265.4
2625 Male, age 61, both hemispheres 310.8
2066 Male, age 76, right hemisphere 279.6
2389 Female, age 91, both hemispheres 271.7
2033 Male, age 80, both hemispheres 237.2
2386 Female, age 85, both hemispheres 227.7
Spinal trigeminal nucleus, oral
nTPM: 236.9
2164 Male, age 80, both hemispheres 243.7
2737 Female, age 85, both hemispheres 235.3
1978 Male, age 76, both hemispheres 231.7
Spinal vestibular nucleus
nTPM: 256.6
2186 Female, age 91, both hemispheres 276.1
2748 Male, age 76, both hemispheres 262.0
2384 Male, age 74, both hemispheres 260.4
2806 Female, age 85, both hemispheres 253.6
2796 Male, age 61, both hemispheres 250.1
2780 Male, age 80, both hemispheres 237.4
Subcoeruleus area
nTPM: 259.0
2089 Male, age 76, left hemisphere 283.7
2369 Female, age 85, left hemisphere 264.6
1958 Male, age 80, both hemispheres 260.6
2323 Female, age 91, left hemisphere 252.7
2451 Male, age 74, both hemispheres 233.1
Superior olive
nTPM: 283.5
2329 Male, age 80, right hemisphere 302.9
1875 Female, age 85, both hemispheres 300.0
2020 Male, age 76, both hemispheres 294.8
2561 Female, age 91, both hemispheres 266.5
2364 Male, age 74, right hemisphere 253.2
Superior vestibular nucleus
nTPM: 229.4
2015 Male, age 80, both hemispheres 238.0
2383 Male, age 74, both hemispheres 231.2
2061 Male, age 76, both hemispheres 218.9
Ventral medullary reticular nucleus
nTPM: 258.8
2372 Male, age 61, both hemispheres 265.7
2060 Male, age 76, both hemispheres 251.8
Ventral periolivary nuclei
nTPM: 292.9
2023 Male, age 76, both hemispheres 307.6
2130 Female, age 85, both hemispheres 300.7
2165 Male, age 80, both hemispheres 298.3
2794 Female, age 91, left hemisphere 264.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 243.0
2180 Male, age 61, both hemispheres 254.0
1986 Male, age 76, both hemispheres 253.3
2302 Female, age 91, both hemispheres 251.1
2741 Female, age 85, both hemispheres 234.5
2118 Male, age 80, both hemispheres 222.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 261.4
1959 Male, age 76, both hemispheres 282.2
2456 Female, age 91, both hemispheres 276.0
2161 Male, age 80, both hemispheres 267.7
2840 Female, age 85, both hemispheres 255.0
2449 Male, age 74, both hemispheres 251.4
2359 Male, age 61, both hemispheres 235.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 372.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 309.1
FF:10182-103D2 60 years, female 322.8
FF:10165-103B3 76 years, female 295.5
Medulla oblongata
Scaled Tags Per Million: 260.6
FF:10038-101F2 18-64 years, mixed 309.8
FF:10155-103A2 76 years, female 275.2
FF:10174-103C3 60 years, female 196.8
Pons
Scaled Tags Per Million: 372.6
FF:10033-101E6 18-54 years, mixed 372.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 177.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 177.5
Samples: 4

Max nTPM: 194.9
Min nTPM: 158.8
Sample A Female 194.9
Sample B Female 168.9
Sample C Male 187.2
Sample D Male 158.8
Pons
nTPM: 172.9
Samples: 4

Max nTPM: 184.0
Min nTPM: 164.3
Sample A Female 176.0
Sample B Female 164.3
Sample C Male 167.3
Sample D Male 184.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 124.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 124.3
Samples: 4

Max nTPM: 136.1
Min nTPM: 106.0
Sample A Male 136.1
Sample B Male 127.3
Sample C Female 106.0
Sample D Female 127.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.5
74003383 Antisense, RP_051130_01_E10, Mouse strain C57BL/6J (56 days, male) 1.5
Pons
Expression energy: 1.2
74003383 Antisense, RP_051130_01_E10, Mouse strain C57BL/6J (56 days, male) 1.2

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