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PHF21B
HPA
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  • PHF21B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PHF21B
Synonyms BHC80L, FLJ34161, PHF4
Gene descriptioni

Full gene name according to HGNC.

PHD finger protein 21B
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 22
Cytoband q13.31
Chromosome location (bp) 44881162 - 45010005
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000056487 (version 109)
Entrez gene 112885
HGNC HGNC:25161
UniProt Q96EK2 (UniProt - Evidence at protein level)
neXtProt NX_Q96EK2
GeneCards PHF21B
Antibodypedia PHF21B antibodies


PROTEIN FUNCTION
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PHF21B-201
ENSP00000324403
ENST00000313237
Q96EK2
[Direct mapping] PHD finger protein 21B
Show all
A0A0S2Z6R3
[Target identity:100%; Query identity:100%] PHD finger protein 21B isoform 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0046872 [metal ion binding]
Show all
531 aa
57.5 kDa
No 0
PHF21B-202
ENSP00000379410
ENST00000396103
Q96EK2
[Direct mapping] PHD finger protein 21B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0046872 [metal ion binding]
Show all
477 aa
51.8 kDa
No 0
PHF21B-203
ENSP00000385053
ENST00000403565
B1AHC5
[Direct mapping] PHD finger protein 21B; PHD finger protein 21B, isoform CRA_c; cDNA FLJ34161 fis, clone FCBBF3014229, highly similar to PHD finger protein 21B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0046872 [metal ion binding]
Show all
327 aa
36.4 kDa
No 0
PHF21B-204
ENSP00000401091
ENST00000414269
B1AHC6
[Direct mapping] PHD finger protein 21B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
137 aa
15.2 kDa
No 0
PHF21B-205
ENSP00000401294
ENST00000420689
B0QYW2
[Direct mapping] PHD finger protein 21B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
191 aa
19.7 kDa
No 0
PHF21B-212
ENSP00000487086
ENST00000629843
Q96EK2
[Direct mapping] PHD finger protein 21B
Show all
A0A0S2Z665
[Target identity:100%; Query identity:100%] PHD finger protein 21B isoform 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0046872 [metal ion binding]
Show all
489 aa
53 kDa
No 0

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