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GDI2
HPA
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  • SUMMARY

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  • GDI2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GDI2
Synonyms RABGDIB
Gene descriptioni

Full gene name according to HGNC.

GDP dissociation inhibitor 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband p15.1
Chromosome location (bp) 5765223 - 5842132
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000057608 (version 109)
Entrez gene 2665
HGNC HGNC:4227
UniProt P50395 (UniProt - Evidence at protein level)
neXtProt NX_P50395
GeneCards GDI2
Antibodypedia GDI2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

GDP-dissociation inhibitor preventing the GDP to GTP exchange of most Rab proteins. By keeping these small GTPases in their inactive GDP-bound form regulates intracellular membrane trafficking 1. Negatively regulates protein transport to the cilium and ciliogenesis through the inhibition of RAB8A 2.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

GTPase activation
Gene summary (Entrez)i

Useful information about the gene from Entrez

GDP dissociation inhibitors are proteins that regulate the GDP-GTP exchange reaction of members of the rab family, small GTP-binding proteins of the ras superfamily, that are involved in vesicular trafficking of molecules between cellular organelles. GDIs slow the rate of dissociation of GDP from rab proteins and release GDP from membrane-bound rabs. GDI2 is ubiquitously expressed. The GDI2 gene contains many repetitive elements indicating that it may be prone to inversion/deletion rearrangements. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GDI2-201
ENSP00000369470
ENST00000380127
Q5SX90
[Direct mapping] Rab GDP dissociation inhibitor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
Show all
148 aa
16.8 kDa
No 0
GDI2-202
ENSP00000369528
ENST00000380181
P50395
[Direct mapping] Rab GDP dissociation inhibitor beta
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005925 [focal adhesion]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0031982 [vesicle]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0070062 [extracellular exosome]
GO:1902018 [negative regulation of cilium assembly]
GO:1903565 [negative regulation of protein localization to cilium]
Show all
400 aa
45.6 kDa
No 0
GDI2-203
ENSP00000369538
ENST00000380191
P50395
[Direct mapping] Rab GDP dissociation inhibitor beta
Show all
Q6IAT1
[Target identity:100%; Query identity:100%] Rab GDP dissociation inhibitor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005925 [focal adhesion]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0031267 [small GTPase binding]
GO:0031982 [vesicle]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0045202 [synapse]
GO:0070062 [extracellular exosome]
GO:1902018 [negative regulation of cilium assembly]
GO:1903565 [negative regulation of protein localization to cilium]
Show all
445 aa
50.7 kDa
No 0
GDI2-204
ENSP00000394177
ENST00000418688
Q5SX86
[Direct mapping] Rab GDP dissociation inhibitor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
Show all
155 aa
17.8 kDa
No 0
GDI2-205
ENSP00000387565
ENST00000447751
Q5SX91
[Direct mapping] Rab GDP dissociation inhibitor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
Show all
203 aa
23.1 kDa
No 0
GDI2-206
ENSP00000401733
ENST00000456041
Q5SX87
[Direct mapping] Rab GDP dissociation inhibitor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
Show all
263 aa
29.9 kDa
No 0
GDI2-208
ENSP00000476707
ENST00000608581
V9GYF8
[Direct mapping] Rab GDP dissociation inhibitor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
Show all
130 aa
14.9 kDa
No 0
GDI2-209
ENSP00000476832
ENST00000609712
V9GYJ7
[Direct mapping] Rab GDP dissociation inhibitor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005092 [GDP-dissociation inhibitor activity]
GO:0005093 [Rab GDP-dissociation inhibitor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
Show all
125 aa
14.1 kDa
No 0

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