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ATP11B
HPA
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  • ATP11B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ATP11B
Synonyms ATPIF, ATPIR, KIAA0956
Gene descriptioni

Full gene name according to HGNC.

ATPase phospholipid transporting 11B (putative)
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q26.33
Chromosome location (bp) 182793503 - 182921629
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000058063 (version 109)
Entrez gene 23200
HGNC HGNC:13553
UniProt Q9Y2G3 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y2G3
GeneCards ATP11B
Antibodypedia ATP11B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalytic component of a P4-ATPase flippase complex which catalyzes the hydrolysis of ATP coupled to the transport of aminophospholipids, phosphatidylserines (PS) and phosphatidylethanolamines (PE), from the outer to the inner leaflet of intracellular membranes 1. May contribute to the maintenance of membrane lipid asymmetry in endosome compartment 2.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Translocase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Magnesium, Metal-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

P-type ATPases, such as ATP11B, are phosphorylated in their intermediate state and drive uphill transport of ions across membranes. Several subfamilies of P-type ATPases have been identified. One subfamily transports heavy metal ions, such as Cu(2+) or Cd(2+). Another subfamily transports non-heavy metal ions, such as H(+), Na(+), K(+), or Ca(+). A third subfamily transports amphipaths, such as phosphatidylserine.[supplied by OMIM, Feb 2005]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ATP11B-201
ENSP00000321195
ENST00000323116
Q9Y2G3
[Direct mapping] Phospholipid-transporting ATPase IF
Show all
Enzymes
   ENZYME proteins
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0000287 [magnesium ion binding]
GO:0005215 [transporter activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005637 [nuclear inner membrane]
GO:0005768 [endosome]
GO:0005769 [early endosome]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005802 [trans-Golgi network]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006869 [lipid transport]
GO:0015075 [ion transmembrane transporter activity]
GO:0015914 [phospholipid transport]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0031901 [early endosome membrane]
GO:0034220 [ion transmembrane transport]
GO:0035577 [azurophil granule membrane]
GO:0045332 [phospholipid translocation]
GO:0046872 [metal ion binding]
GO:0055037 [recycling endosome]
GO:0055038 [recycling endosome membrane]
GO:0090555 [phosphatidylethanolamine flippase activity]
GO:0090556 [phosphatidylserine floppase activity]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
1177 aa
134.2 kDa
No >9
ATP11B-204
ENSP00000417124
ENST00000482070
H7C4E6
[Direct mapping] Phospholipid-transporting ATPase IF
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005215 [transporter activity]
GO:0005524 [ATP binding]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034204 [lipid translocation]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
238 aa
27.1 kDa
No 5
ATP11B-206
ENSP00000419152
ENST00000484691
H7C575
[Direct mapping] Phospholipid-transporting ATPase IF
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
119 aa
13.6 kDa
No 1
ATP11B-208
ENSP00000419768
ENST00000491699
H0Y8C7
[Direct mapping] Phospholipid-transporting ATPase IF
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
147 aa
16.6 kDa
No 2
ATP11B-209
ENSP00000419032
ENST00000493826
A0A0C4DG94
[Direct mapping] Phospholipid-transporting ATPase IF
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005215 [transporter activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034204 [lipid translocation]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
195 aa
22.5 kDa
No 2
ATP11B-210
ENSP00000418421
ENST00000498086
H7C4W6
[Direct mapping] Phospholipid-transporting ATPase
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0000287 [magnesium ion binding]
GO:0005215 [transporter activity]
GO:0005524 [ATP binding]
GO:0015914 [phospholipid transport]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034204 [lipid translocation]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
970 aa
111 kDa
No 8

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