HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		40.488
RNA expressioni
Consensus:74.8 nTPM
HPA Brain:413.4 nTPM
GTEx:74.8 nTPM
FANTOM5:164.9 Scaled Tags Per Million
Pig:210.7 nTPM
Mouse:484.6 nTPM
Allen mouse:21.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026307Antibody HPA051783Antibody HPA051785Antibody HPA053973Antibody CAB006849
Glial cells Not detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells MediumHighMediumHighHigh











HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA026307
Hippocampal formation mean intensity 40.488
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 15.105
Molecular layer of the dentate gyrus 10.553
Granular dentate gyrus 40.149
CA1 - oriens layer 15.341
CA1 - pyramidal layer 34.718
CA1 - radiatum layer 17.470
CA2 - oriens layer 12.846
CA2 - pyramidal layer 40.488
CA2 - radiatum layer 14.949
CA3 - oriens layer 12.518
CA3 - pyramidal layer 26.372
CA3 - radiatum layer 12.023
Stratum lucidum 13.930
Lacunosum moleculare 11.932
Subiculum 9.758

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 413.4
Sample id Sample description nTPM
Hippocampus
nTPM: 336.7
2148 Female, age 91, left hemisphere 483.3
2621 Female, age 67, right hemisphere 384.6
1898 Male, age 80, left hemisphere 362.0
1855 Male, age 76, left hemisphere 299.6
1911 Female, age 85, right hemisphere 282.6
2529 Female, age 94, left hemisphere 208.4
Dentate gyrus
nTPM: 388.3
1927 Female, age 91, both hemispheres 576.5
2530 Female, age 94, left hemisphere 428.2
2531 Female, age 67, both hemispheres 418.1
2010 Male, age 76, both hemispheres 342.0
2528 Male, age 74, both hemispheres 309.4
2246 Female, age 85, both hemispheres 255.9
Entorhinal gyrus
nTPM: 220.5
2613 Female, age 94, left hemisphere 313.6
2686 Male, age 75, right hemisphere 235.7
2764 Male, age 80, right hemisphere 226.7
1938 Female, age 85, left hemisphere 207.3
1787 Male, age 76, left hemisphere 186.1
2117 Female, age 91, right hemisphere 153.5
Hippocampus, CA1
nTPM: 413.4
2749 Male, age 80, left hemisphere 808.3
1873 Female, age 85, both hemispheres 427.0
2045 Male, age 76, both hemispheres 350.2
2527 Male, age 74, both hemispheres 310.0
2082 Female, age 91, right hemisphere 171.3
Hippocampus, CA2
nTPM: 287.3
1963 Male, age 80, left hemisphere 502.7
1892 Male, age 76, both hemispheres 379.3
2437 Female, age 94, left hemisphere 287.0
2249 Male, age 74, both hemispheres 221.2
2113 Female, age 91, right hemisphere 169.9
1940 Female, age 85, left hemisphere 164.0
Hippocampus, CA3
nTPM: 394.4
2137 Male, age 80, left hemisphere 589.1
2620 Female, age 94, left hemisphere 577.5
2861 Female, age 67, both hemispheres 455.4
1867 Male, age 76, both hemispheres 302.1
2436 Male, age 74, both hemispheres 221.4
1891 Female, age 85, both hemispheres 220.9
Parahippocampal cortex
nTPM: 211.3
2245 Female, age 91, both hemispheres 309.4
1990 Female, age 91, right hemisphere 234.8
2693 Female, age 94, both hemispheres 233.2
2622 Female, age 67, right hemisphere 229.3
1850 Male, age 80, both hemispheres 210.2
2692 Male, age 74, both hemispheres 198.3
1933 Female, age 85, both hemispheres 184.1
2532 Female, age 72, left hemisphere 175.5
2018 Male, age 76, both hemispheres 169.8
2250 Female, age 67, right hemisphere 168.4
Perirhinal gyrus
nTPM: 222.6
1847 Female, age 91, left hemisphere 299.5
1794 Male, age 80, right hemisphere 228.6
2521 Female, age 94, right hemisphere 200.8
1841 Female, age 85, right hemisphere 195.6
2848 Male, age 76, right hemisphere 188.5
Subiculum
nTPM: 229.8
1901 Male, age 80, both hemispheres 294.5
2438 Female, age 94, left hemisphere 252.9
2729 Female, age 91, right hemisphere 245.8
1977 Female, age 85, both hemispheres 201.7
2042 Male, age 76, both hemispheres 201.7
2619 Male, age 74, both hemispheres 182.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 74.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.8
Samples: 197

Max nTPM: 191.9
Min nTPM: 2.5
Std nTPM: 46.2
Median nTPM: 66.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 191.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 189.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 186.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 185.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 182.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 180.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 177.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 171.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 171.0
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 168.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 163.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 164.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 164.9
FF:10169-103B7 60 years, female 228.4
FF:10153-102I9 76 years, female 101.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 210.7
Pig sample Sample description nTPM
Subiculum
nTPM: 130.8
Samples: 4

Max nTPM: 175.8
Min nTPM: 109.0
Sample A Female 175.8
Sample B Female 111.4
Sample C Male 126.9
Sample D Male 109.0
Dorsal hippocampus
nTPM: 210.7
Samples: 4

Max nTPM: 270.3
Min nTPM: 122.3
Sample A Female 270.3
Sample B Female 235.8
Sample C Male 122.3
Sample D Male 214.5
Entorhinal cortex
nTPM: 167.8
Samples: 4

Max nTPM: 205.2
Min nTPM: 150.6
Sample A Female 205.2
Sample B Female 154.4
Sample C Male 150.6
Sample D Male 160.9
Ventral hippocampus
nTPM: 166.0
Samples: 4

Max nTPM: 222.5
Min nTPM: 101.9
Sample A Female 166.8
Sample B Female 101.9
Sample C Male 172.6
Sample D Male 222.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 484.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 266.6
Samples: 4

Max nTPM: 279.0
Min nTPM: 248.4
Sample A Male 279.0
Sample B Male 248.4
Sample C Female 272.9
Sample D Female 266.0
Hippocampal formation
nTPM: 484.6
Samples: 4

Max nTPM: 574.4
Min nTPM: 397.5
Sample A Male 397.5
Sample B Male 539.1
Sample C Female 574.4
Sample D Female 427.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.7
70719036 Antisense, RP_050426_01_E04, Mouse strain C57BL/6J (56 days, male) 21.7

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