We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PSD
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PSD
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:469.2 nTPM
HPA Brain:348.2 nTPM
GTEx:469.2 nTPM
FANTOM5:445.9 Scaled Tags Per Million
Pig:169.6 nTPM
Mouse:176.4 nTPM
Allen mouse:11.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059237
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

348.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 333.4
2290 Female, age 72, unknown 469.1
1857 Female, age 85, left hemisphere 417.5
1781 Male, age 74, unknown 349.8
1854 Male, age 80, left hemisphere 340.5
2289 Male, age 61, right hemisphere 334.0
2288 Male, age 75, left hemisphere 282.0
2846 Female, age 79, unknown 264.0
2481 Female, age 94, left hemisphere 210.0
Globus pallidus, externus
nTPM: 55.6
2646 Male, age 61, right hemisphere 96.9
2567 Female, age 72, unknown 55.4
2395 Male, age 75, both hemispheres 49.2
2772 Female, age 79, unknown 40.3
1996 Male, age 80, right hemisphere 36.1
Globus pallidus, internus
nTPM: 48.1
2483 Female, age 94, right hemisphere 145.0
2566 Female, age 72, unknown 55.9
1818 Male, age 74, unknown 37.8
2037 Male, age 80, right hemisphere 31.2
2287 Male, age 75, right hemisphere 25.6
2111 Female, age 85, right hemisphere 22.8
2778 Female, age 91, both hemispheres 18.2
Nucleus accumbens
nTPM: 348.2
1783 Male, age 74, unknown 536.8
1856 Female, age 91, right hemisphere 493.7
1806 Female, age 85, left hemisphere 440.8
2824 Male, age 61, right hemisphere 417.6
2286 Male, age 75, left hemisphere 304.5
2698 Female, age 72, unknown 273.9
2732 Male, age 80, right hemisphere 186.4
2391 Female, age 94, left hemisphere 131.6
Nucleus basalis of Meynert
nTPM: 218.8
2484 Female, age 94, left hemisphere 282.6
2393 Male, age 80, right hemisphere 228.0
2821 Male, age 75, both hemispheres 196.1
2569 Male, age 61, both hemispheres 168.5
Nucleus of the diagonal band
nTPM: 286.0
2195 Female, age 85, both hemispheres 319.0
2029 Male, age 61, right hemisphere 315.5
2775 Male, age 80, right hemisphere 307.0
1812 Female, age 91, both hemispheres 304.3
1979 Male, age 74, unknown 184.3
Putamen
nTPM: 295.1
1937 Female, age 91, right hemisphere 385.4
1838 Male, age 80, right hemisphere 338.6
2647 Male, age 75, left hemisphere 305.9
2489 Female, age 72, unknown 282.5
1829 Male, age 74, unknown 268.4
2466 Female, age 79, unknown 257.5
2482 Female, age 94, left hemisphere 227.6
Septal nuclei
nTPM: 263.7
1960 Male, age 74, unknown 481.3
2059 Female, age 85, both hemispheres 324.6
2031 Female, age 72, unknown 279.7
2009 Female, age 91, both hemispheres 270.6
2629 Female, age 94, right hemisphere 241.9
2394 Male, age 61, left hemisphere 156.4
2199 Male, age 80, right hemisphere 91.2
Stria terminalis, bed nucleus
nTPM: 249.6
2486 Female, age 94, both hemispheres 326.9
1974 Female, age 91, both hemispheres 278.2
2201 Male, age 74, unknown 143.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

469.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 333.9
Samples: 246

Max nTPM: 868.5
Min nTPM: 25.8
Std nTPM: 153.6
Median nTPM: 316.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 868.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 835.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 758.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 705.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 691.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 669.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 657.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 653.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 641.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 639.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 609.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 594.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 590.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 590.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 583.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 576.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 566.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 563.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 554.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 542.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 536.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 532.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 532.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 526.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 525.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 519.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 514.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 514.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 510.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 506.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 506.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 503.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 502.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 502.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 501.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 500.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 498.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 495.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 495.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 495.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 495.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 492.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 486.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 480.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 478.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 478.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 475.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 475.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 473.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 472.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 467.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 466.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 466.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 466.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 464.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 460.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 458.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 455.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 453.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 452.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 448.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 440.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 436.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 436.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 430.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 428.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 428.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 427.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 425.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 424.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 424.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 422.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 419.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 418.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 418.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 411.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 410.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 410.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 409.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 409.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 409.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 397.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 397.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 396.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 394.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 386.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 386.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 383.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 380.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 379.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 377.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 377.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 375.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 372.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 371.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 370.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 365.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 364.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 363.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 362.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 359.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 357.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 354.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 352.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 346.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 346.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 344.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 344.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 342.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 341.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 336.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 336.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 335.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 332.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 332.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 331.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 326.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 325.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 325.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 321.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 321.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 321.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 319.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 313.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 312.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 311.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 311.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 307.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 306.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 306.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 300.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 300.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 300.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 299.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 298.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 297.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 296.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 295.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 295.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 293.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 293.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 287.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 285.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 285.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 283.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 282.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 279.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 279.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 276.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 274.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 273.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 270.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 269.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 262.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 262.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 262.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 259.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 257.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 255.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 254.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 253.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 253.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 253.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 252.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 252.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 252.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 249.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 246.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 241.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 240.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 239.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 239.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 238.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 237.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 236.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 233.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 232.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 231.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 230.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 230.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 229.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 224.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 224.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 223.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 217.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 215.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 209.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 208.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 206.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 205.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 204.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 203.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 199.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 197.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 197.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 196.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 195.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 195.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 190.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 188.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 185.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 183.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 180.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 179.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 177.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 175.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 174.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 172.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 170.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 164.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 162.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 162.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 162.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 160.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 160.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 156.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 155.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 154.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 153.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 153.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 152.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 150.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 150.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 149.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 142.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 138.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 133.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 130.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 127.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 126.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 124.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 121.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 119.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 116.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 115.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 113.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 98.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 95.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 89.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 76.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 68.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 54.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 52.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 43.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 25.8
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 469.2
Samples: 246

Max nTPM: 1076.5
Min nTPM: 24.4
Std nTPM: 195.1
Median nTPM: 483.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1076.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 992.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 951.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 915.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 870.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 811.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 808.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 802.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 775.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 757.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 756.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 752.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 747.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 744.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 743.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 743.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 725.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 721.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 719.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 717.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 716.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 715.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 714.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 707.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 706.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 695.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 694.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 693.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 690.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 682.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 680.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 677.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 670.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 669.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 667.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 665.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 659.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 653.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 653.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 651.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 649.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 646.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 644.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 644.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 644.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 642.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 641.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 640.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 638.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 635.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 634.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 633.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 632.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 632.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 627.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 626.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 620.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 620.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 616.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 614.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 612.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 610.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 609.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 603.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 602.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 602.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 601.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 596.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 596.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 596.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 591.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 587.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 585.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 582.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 579.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 579.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 576.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 575.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 570.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 567.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 567.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 566.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 563.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 561.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 561.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 560.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 557.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 557.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 553.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 552.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 552.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 551.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 549.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 549.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 545.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 539.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 538.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 537.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 530.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 529.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 525.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 523.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 523.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 522.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 519.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 518.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 517.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 517.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 515.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 513.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 511.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 510.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 508.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 506.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 504.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 496.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 495.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 492.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 488.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 488.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 487.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 486.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 485.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 482.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 482.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 481.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 479.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 475.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 474.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 472.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 471.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 470.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 469.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 468.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 466.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 463.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 459.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 457.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 456.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 455.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 454.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 449.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 447.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 443.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 439.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 438.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 427.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 425.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 424.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 423.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 419.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 419.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 417.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 408.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 408.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 403.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 402.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 399.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 396.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 396.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 394.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 393.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 390.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 383.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 382.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 382.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 382.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 382.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 376.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 374.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 373.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 371.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 365.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 364.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 364.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 363.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 359.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 354.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 353.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 349.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 348.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 346.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 340.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 338.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 335.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 334.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 334.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 332.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 331.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 329.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 326.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 322.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 320.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 318.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 317.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 304.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 294.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 292.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 289.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 287.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 285.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 281.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 279.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 278.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 276.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 272.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 270.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 264.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 256.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 248.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 247.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 246.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 243.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 243.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 238.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 223.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 223.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 221.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 220.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 214.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 214.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 210.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 208.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 206.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 194.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 179.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 175.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 147.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 142.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 141.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 139.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 123.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 118.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 118.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 106.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 102.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 71.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 70.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 67.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 60.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 55.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 52.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 50.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 49.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 28.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 24.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 295.3
Samples: 205

Max nTPM: 951.7
Min nTPM: 36.5
Std nTPM: 155.5
Median nTPM: 277.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 951.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 829.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 652.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 649.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 634.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 612.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 607.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 585.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 584.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 583.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 582.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 558.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 543.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 538.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 536.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 534.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 516.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 511.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 511.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 507.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 502.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 500.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 498.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 495.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 467.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 466.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 466.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 462.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 461.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 457.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 453.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 452.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 448.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 442.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 442.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 440.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 437.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 437.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 436.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 436.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 434.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 427.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 425.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 424.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 422.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 421.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 419.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 417.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 409.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 409.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 405.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 404.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 401.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 397.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 391.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 379.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 374.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 371.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 371.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 369.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 368.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 368.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 367.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 359.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 356.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 355.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 354.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 353.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 351.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 346.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 345.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 344.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 336.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 336.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 336.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 336.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 335.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 334.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 334.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 330.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 327.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 322.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 322.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 321.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 321.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 320.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 314.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 314.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 313.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 311.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 301.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 300.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 299.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 296.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 292.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 290.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 290.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 290.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 289.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 287.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 283.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 282.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 277.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 271.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 268.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 268.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 264.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 260.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 260.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 259.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 255.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 254.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 246.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 245.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 241.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 240.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 238.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 237.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 236.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 233.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 232.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 231.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 228.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 227.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 226.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 224.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 224.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 223.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 222.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 213.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 213.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 212.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 210.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 209.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 204.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 202.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 201.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 201.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 200.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 197.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 197.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 193.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 192.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 192.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 192.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 187.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 186.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 185.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 184.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 183.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 180.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 179.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 179.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 178.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 177.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 176.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 173.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 173.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 166.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 164.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 164.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 163.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 161.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 160.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 157.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 156.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 155.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 146.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 145.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 144.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 141.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 141.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 140.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 139.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 139.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 137.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 134.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 134.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 128.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 127.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 127.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 125.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 125.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 123.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 115.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 106.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 103.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 100.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 97.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 89.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 88.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 87.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 86.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 85.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 84.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 82.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 80.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 72.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 72.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 52.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 49.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 41.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 39.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 36.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

445.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 443.8
FF:10164-103B2 76 years, female 443.8
Nucleus accumbens
Scaled Tags Per Million: 252.3
FF:10037-101F1 23-56 years, mixed 252.3
Putamen
Scaled Tags Per Million: 445.9
FF:10176-103C5 60 years, female 445.9
Globus pallidus
Scaled Tags Per Million: 104.3
FF:10175-103C4 60 years, female 160.0
FF:10161-103A8 76 years, female 48.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.6
Pig sample Sample description nTPM
Caudate
nTPM: 169.6
Samples: 4

Max nTPM: 204.3
Min nTPM: 129.3
Sample A Female 129.3
Sample B Female 185.6
Sample C Male 204.3
Sample D Male 159.1
Putamen
nTPM: 143.3
Samples: 4

Max nTPM: 189.9
Min nTPM: 56.8
Sample A Female 56.8
Sample B Female 152.6
Sample C Male 189.9
Sample D Male 173.8
Septum
nTPM: 77.9
Samples: 4

Max nTPM: 120.5
Min nTPM: 38.1
Sample A Female 120.5
Sample B Female 113.7
Sample C Male 39.3
Sample D Male 38.1
Ventral pallidum
nTPM: 112.6
Samples: 4

Max nTPM: 139.8
Min nTPM: 58.1
Sample A Female 139.8
Sample B Female 132.3
Sample C Male 58.1
Sample D Male 120.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 176.5
Samples: 4

Max nTPM: 240.3
Min nTPM: 125.8
Sample A Male 179.5
Sample B Male 240.3
Sample C Female 125.8
Sample D Female 160.2
Septum
nTPM: 80.0
Samples: 4

Max nTPM: 95.9
Min nTPM: 65.2
Sample A Male 95.9
Sample B Male 70.3
Sample C Female 88.5
Sample D Female 65.2
Ventral forebrain
nTPM: 144.7
Samples: 4

Max nTPM: 166.9
Min nTPM: 127.0
Sample A Male 166.9
Sample B Male 127.0
Sample C Female 153.4
Sample D Female 131.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.1
72128746 Antisense, RP_051017_04_C02, Mouse strain C57BL/6J (56 days, male) 12.7
69352896 Antisense, RP_050412_01_D02, Mouse strain C57BL/6J (56 days, male) 9.5
Pallidum
Expression energy: 7.0
69352896 Antisense, RP_050412_01_D02, Mouse strain C57BL/6J (56 days, male) 7.2
72128746 Antisense, RP_051017_04_C02, Mouse strain C57BL/6J (56 days, male) 6.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org