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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:52.8 nTPM
HPA Brain:114.3 nTPM
GTEx:52.8 nTPM
FANTOM5:211.9 Scaled Tags Per Million
Pig:120.5 nTPM
Mouse:310.1 nTPM
Allen mouse:18.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020449
Glial cells Not detected
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 99.1
1857 Female, age 85, left hemisphere 114.5
2846 Female, age 79, unknown 107.4
2290 Female, age 72, unknown 105.9
2481 Female, age 94, left hemisphere 103.3
1854 Male, age 80, left hemisphere 102.1
1781 Male, age 74, unknown 96.4
2288 Male, age 75, left hemisphere 88.1
2289 Male, age 61, right hemisphere 75.1
Globus pallidus, externus
nTPM: 57.9
2772 Female, age 79, unknown 72.7
2395 Male, age 75, both hemispheres 71.4
1996 Male, age 80, right hemisphere 57.5
2646 Male, age 61, right hemisphere 46.1
2567 Female, age 72, unknown 41.6
Globus pallidus, internus
nTPM: 61.7
2483 Female, age 94, right hemisphere 90.0
2287 Male, age 75, right hemisphere 82.4
1818 Male, age 74, unknown 62.8
2778 Female, age 91, both hemispheres 57.1
2037 Male, age 80, right hemisphere 54.2
2111 Female, age 85, right hemisphere 43.3
2566 Female, age 72, unknown 42.2
Nucleus accumbens
nTPM: 97.4
1856 Female, age 91, right hemisphere 129.9
1783 Male, age 74, unknown 112.8
1806 Female, age 85, left hemisphere 104.6
2286 Male, age 75, left hemisphere 99.5
2824 Male, age 61, right hemisphere 95.5
2698 Female, age 72, unknown 90.6
2391 Female, age 94, left hemisphere 83.6
2732 Male, age 80, right hemisphere 62.9
Nucleus basalis of Meynert
nTPM: 75.4
2393 Male, age 80, right hemisphere 91.7
2484 Female, age 94, left hemisphere 86.6
2821 Male, age 75, both hemispheres 73.6
2569 Male, age 61, both hemispheres 49.9
Nucleus of the diagonal band
nTPM: 114.3
1812 Female, age 91, both hemispheres 133.4
2775 Male, age 80, right hemisphere 132.8
2195 Female, age 85, both hemispheres 118.6
2029 Male, age 61, right hemisphere 104.1
1979 Male, age 74, unknown 82.7
Putamen
nTPM: 92.1
1838 Male, age 80, right hemisphere 114.0
2466 Female, age 79, unknown 111.9
1937 Female, age 91, right hemisphere 102.2
1829 Male, age 74, unknown 97.7
2482 Female, age 94, left hemisphere 88.9
2647 Male, age 75, left hemisphere 69.5
2489 Female, age 72, unknown 60.6
Septal nuclei
nTPM: 98.5
2031 Female, age 72, unknown 139.0
1960 Male, age 74, unknown 132.9
2009 Female, age 91, both hemispheres 109.0
2629 Female, age 94, right hemisphere 98.3
2059 Female, age 85, both hemispheres 76.1
2199 Male, age 80, right hemisphere 68.8
2394 Male, age 61, left hemisphere 65.4
Stria terminalis, bed nucleus
nTPM: 95.7
1974 Female, age 91, both hemispheres 119.6
2486 Female, age 94, both hemispheres 102.5
2201 Male, age 74, unknown 64.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.6
Samples: 246

Max nTPM: 152.3
Min nTPM: 26.5
Std nTPM: 15.6
Median nTPM: 49.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 152.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 103.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 98.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 97.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 91.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 90.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 89.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 87.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 83.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 81.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 81.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 80.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 80.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 79.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 78.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 78.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 77.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 74.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 74.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 73.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 73.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 73.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 72.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 71.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 70.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 69.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 69.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 69.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 68.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 68.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 67.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 66.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 66.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 66.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 65.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 65.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 64.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 64.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 64.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 64.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 64.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 64.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 63.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 63.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 62.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 62.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 62.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 61.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 61.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 61.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 61.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 61.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 61.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 60.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 60.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 60.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 59.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 59.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 58.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 58.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 58.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 58.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 57.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 57.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 57.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 56.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 56.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 56.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 56.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 56.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 55.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 55.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 55.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 55.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 55.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 55.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 55.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 54.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 54.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 54.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 54.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 53.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 53.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 53.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 53.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 53.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 52.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 52.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 51.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 51.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 51.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 51.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 51.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 51.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 51.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 50.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 50.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 50.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 50.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 49.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 49.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 49.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 49.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 48.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 48.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 48.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 48.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 47.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 47.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 47.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 47.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 47.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 47.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 47.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 47.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 46.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 46.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 46.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 46.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 45.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 45.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 45.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 44.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 44.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 44.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 44.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 43.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 43.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 43.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 43.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 43.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 43.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 43.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 43.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 42.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 42.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 42.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 42.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 42.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 42.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 41.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 41.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 41.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 41.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 41.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 41.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 41.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 41.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 40.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 40.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 40.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 40.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 40.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 40.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 40.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 40.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 39.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 39.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 38.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 38.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 38.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 38.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 38.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 38.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 37.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 37.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 37.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 37.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 37.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 37.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 37.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 36.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 36.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 36.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 36.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 36.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 36.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 35.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 35.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 35.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 35.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 35.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 35.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 35.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 35.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 35.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 35.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 34.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 34.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 34.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 33.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 33.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 33.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 33.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 32.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 32.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 32.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 32.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 31.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 31.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 30.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 29.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 28.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 27.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 26.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 52.8
Samples: 246

Max nTPM: 100.2
Min nTPM: 27.1
Std nTPM: 13.5
Median nTPM: 51.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 100.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 92.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 87.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 87.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 87.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 81.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 79.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 79.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 79.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 78.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 78.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 76.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 76.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 76.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 76.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 75.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 74.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 74.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 74.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 73.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 72.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 72.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 72.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 71.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 71.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 71.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 70.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 70.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 69.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 69.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 68.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 68.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 68.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 67.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 67.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 67.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 67.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 66.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 66.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 66.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 66.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 66.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 65.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 65.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 65.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 64.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 64.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 64.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 64.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 63.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 63.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 63.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 63.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 63.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 63.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 62.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 62.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 62.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 62.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 62.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 61.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 61.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 61.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 61.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 61.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 60.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 60.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 60.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 60.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 60.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 60.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 59.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 59.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 59.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 59.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 59.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 59.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 59.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 59.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 58.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 58.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 58.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 58.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 57.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 57.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 57.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 56.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 56.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 56.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 56.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 56.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 55.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 55.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 55.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 55.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 55.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 55.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 55.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 55.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 55.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 54.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 54.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 54.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 54.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 54.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 53.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 53.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 53.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 53.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 52.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 52.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 52.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 52.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 52.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 52.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 51.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 51.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 51.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 51.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 51.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 51.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 51.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 50.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 50.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 50.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 50.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 50.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 50.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 50.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 49.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 49.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 49.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 49.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 49.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 48.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 48.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 48.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 48.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 48.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 48.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 48.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 47.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 47.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 47.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 47.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 47.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 47.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 47.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 46.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 46.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 46.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 46.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 46.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 45.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 45.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 45.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 45.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 45.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 44.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 44.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 44.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 44.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 44.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 44.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 44.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 44.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 43.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 43.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 43.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 43.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 43.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 43.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 42.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 42.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 42.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 42.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 42.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 42.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 42.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 42.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 41.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 41.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 41.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 41.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 41.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 40.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 40.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 40.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 40.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 40.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 40.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 40.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 40.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 39.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 39.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 39.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 39.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 39.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 39.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 38.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 38.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 38.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 38.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 38.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 37.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 37.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 37.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 37.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 37.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 37.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 37.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 36.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 36.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 36.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 36.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 36.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 35.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 35.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 35.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 35.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 35.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 34.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 33.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 33.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 33.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 32.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 31.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 31.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 31.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 30.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 30.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 30.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 29.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 28.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 28.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 28.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 27.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 45.8
Samples: 205

Max nTPM: 92.9
Min nTPM: 24.6
Std nTPM: 12.2
Median nTPM: 43.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 92.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 86.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 84.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 82.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 77.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 71.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 70.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 69.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 69.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 69.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 69.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 68.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 67.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 67.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 66.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 65.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 65.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 64.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 62.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 62.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 61.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 61.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 61.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 60.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 60.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 59.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 58.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 58.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 58.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 57.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 57.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 57.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 56.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 56.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 56.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 55.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 55.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 55.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 55.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 55.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 55.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 55.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 55.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 53.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 53.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 53.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 52.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 52.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 52.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 52.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 52.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 51.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 51.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 51.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 51.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 49.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 49.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 49.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 49.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 49.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 48.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 48.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 47.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 47.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 47.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 47.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 47.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 47.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 47.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 46.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 46.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 46.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 46.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 45.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 45.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 45.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 45.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 45.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 45.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 44.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 44.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 44.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 44.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 44.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 44.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 44.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 44.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 43.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 43.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 43.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 43.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 43.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 43.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 43.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 42.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 42.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 42.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 42.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 42.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 42.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 41.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 41.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 41.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 41.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 41.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 41.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 40.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 40.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 40.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 40.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 40.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 40.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 39.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 39.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 39.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 39.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 38.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 38.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 38.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 38.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 38.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 38.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 38.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 38.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 38.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 37.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 37.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 37.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 37.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 37.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 37.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 37.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 36.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 36.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 36.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 36.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 36.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 36.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 36.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 36.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 36.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 36.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 36.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 36.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 35.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 35.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 35.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 35.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 35.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 35.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 35.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 35.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 35.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 34.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 34.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 34.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 34.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 34.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 34.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 34.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 33.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 33.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 33.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 33.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 32.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 32.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 32.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 32.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 32.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 31.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 31.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 31.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 30.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 30.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 30.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 30.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 30.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 29.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 28.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 28.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 26.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 26.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 26.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 26.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 25.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 24.6
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

211.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 180.1
FF:10164-103B2 76 years, female 180.1
Nucleus accumbens
Scaled Tags Per Million: 165.3
FF:10037-101F1 23-56 years, mixed 165.3
Putamen
Scaled Tags Per Million: 211.9
FF:10176-103C5 60 years, female 211.9
Globus pallidus
Scaled Tags Per Million: 87.0
FF:10161-103A8 76 years, female 88.6
FF:10175-103C4 60 years, female 85.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.5
Pig sample Sample description nTPM
Caudate
nTPM: 102.1
Samples: 4

Max nTPM: 106.5
Min nTPM: 96.5
Sample A Female 105.8
Sample B Female 96.5
Sample C Male 106.5
Sample D Male 99.4
Putamen
nTPM: 120.5
Samples: 4

Max nTPM: 196.8
Min nTPM: 82.0
Sample A Female 82.0
Sample B Female 101.1
Sample C Male 196.8
Sample D Male 102.1
Septum
nTPM: 93.4
Samples: 4

Max nTPM: 104.5
Min nTPM: 80.7
Sample A Female 104.5
Sample B Female 94.1
Sample C Male 94.1
Sample D Male 80.7
Ventral pallidum
nTPM: 96.4
Samples: 4

Max nTPM: 104.9
Min nTPM: 84.3
Sample A Female 104.7
Sample B Female 104.9
Sample C Male 91.8
Sample D Male 84.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

310.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 310.1
Samples: 4

Max nTPM: 319.0
Min nTPM: 299.2
Sample A Male 319.0
Sample B Male 309.0
Sample C Female 299.2
Sample D Female 313.2
Septum
nTPM: 227.1
Samples: 4

Max nTPM: 239.5
Min nTPM: 217.3
Sample A Male 222.9
Sample B Male 239.5
Sample C Female 228.7
Sample D Female 217.3
Ventral forebrain
nTPM: 252.8
Samples: 4

Max nTPM: 257.8
Min nTPM: 245.1
Sample A Male 255.2
Sample B Male 253.0
Sample C Female 245.1
Sample D Female 257.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.2
69782073 Antisense, RP_050505_02_C06, Mouse strain C57BL/6J (56 days, male) 18.2
Pallidum
Expression energy: 13.3
69782073 Antisense, RP_050505_02_C06, Mouse strain C57BL/6J (56 days, male) 13.3

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