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NCKAP1
HPA
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  • NCKAP1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NCKAP1
Synonyms HEM2, Nap1, NAP125
Gene descriptioni

Full gene name according to HGNC.

NCK associated protein 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q32.1
Chromosome location (bp) 182909115 - 183038858
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000061676 (version 109)
Entrez gene 10787
HGNC HGNC:7666
UniProt Q9Y2A7 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y2A7
GeneCards NCKAP1
Antibodypedia NCKAP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex. Actin remodeling activity is regulated by RAC1. As component of the WAVE1 complex, required for BDNF-NTRK2 endocytic trafficking and signaling from early endosomes.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Host-virus interaction
Gene summary (Entrez)i

Useful information about the gene from Entrez

Contributes to small GTPase binding activity. Involved in Rac protein signal transduction; positive regulation of Arp2/3 complex-mediated actin nucleation; and positive regulation of lamellipodium assembly. Located in extracellular exosome and focal adhesion. Part of SCAR complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NCKAP1-201
ENSP00000354251
ENST00000360982
Q9Y2A7
[Direct mapping] Nck-associated protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000902 [cell morphogenesis]
GO:0001726 [ruffle]
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006915 [apoptotic process]
GO:0007417 [central nervous system development]
GO:0010592 [positive regulation of lamellipodium assembly]
GO:0016020 [membrane]
GO:0016477 [cell migration]
GO:0016601 [Rac protein signal transduction]
GO:0030027 [lamellipodium]
GO:0030031 [cell projection assembly]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030866 [cortical actin cytoskeleton organization]
GO:0031209 [SCAR complex]
GO:0031258 [lamellipodium membrane]
GO:0031267 [small GTPase binding]
GO:0031941 [filamentous actin]
GO:0042995 [cell projection]
GO:0048812 [neuron projection morphogenesis]
GO:0070062 [extracellular exosome]
GO:2000601 [positive regulation of Arp2/3 complex-mediated actin nucleation]
Show all
1134 aa
129.5 kDa
No 2
NCKAP1-202
ENSP00000355348
ENST00000361354
Q9Y2A7
[Direct mapping] Nck-associated protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000902 [cell morphogenesis]
GO:0001726 [ruffle]
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006915 [apoptotic process]
GO:0007417 [central nervous system development]
GO:0010592 [positive regulation of lamellipodium assembly]
GO:0016020 [membrane]
GO:0016477 [cell migration]
GO:0016601 [Rac protein signal transduction]
GO:0030027 [lamellipodium]
GO:0030031 [cell projection assembly]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030866 [cortical actin cytoskeleton organization]
GO:0031209 [SCAR complex]
GO:0031258 [lamellipodium membrane]
GO:0031267 [small GTPase binding]
GO:0031941 [filamentous actin]
GO:0042995 [cell projection]
GO:0048812 [neuron projection morphogenesis]
GO:0070062 [extracellular exosome]
GO:2000601 [positive regulation of Arp2/3 complex-mediated actin nucleation]
Show all
1128 aa
128.8 kDa
No 2
NCKAP1-209
ENSP00000515489
ENST00000703824
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
1132 aa
129.3 kDa
No 2
NCKAP1-210
ENSP00000515490
ENST00000703825
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
1126 aa
128.5 kDa
No 2

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