HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:15.8 nTPM
HPA Brain:78.4 nTPM
GTEx:15.8 nTPM
FANTOM5:65.2 Scaled Tags Per Million
Pig:48.1 nTPM
Mouse:88.7 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030773
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 78.4
Sample id Sample description nTPM
Hippocampus
nTPM: 76.6
1898 Male, age 80, left hemisphere 92.7
2529 Female, age 94, left hemisphere 77.3
1855 Male, age 76, left hemisphere 77.2
1911 Female, age 85, right hemisphere 76.0
2621 Female, age 67, right hemisphere 70.3
2148 Female, age 91, left hemisphere 65.8
Dentate gyrus
nTPM: 68.6
1927 Female, age 91, both hemispheres 79.0
2530 Female, age 94, left hemisphere 75.6
2010 Male, age 76, both hemispheres 74.0
2528 Male, age 74, both hemispheres 66.9
2531 Female, age 67, both hemispheres 60.6
2246 Female, age 85, both hemispheres 55.5
Entorhinal gyrus
nTPM: 74.9
2686 Male, age 75, right hemisphere 88.1
1938 Female, age 85, left hemisphere 76.6
2117 Female, age 91, right hemisphere 76.0
1787 Male, age 76, left hemisphere 70.7
2613 Female, age 94, left hemisphere 70.0
2764 Male, age 80, right hemisphere 67.7
Hippocampus, CA1
nTPM: 69.0
1873 Female, age 85, both hemispheres 79.9
2045 Male, age 76, both hemispheres 78.0
2749 Male, age 80, left hemisphere 65.2
2527 Male, age 74, both hemispheres 61.1
2082 Female, age 91, right hemisphere 61.0
Hippocampus, CA2
nTPM: 71.0
1963 Male, age 80, left hemisphere 81.8
1892 Male, age 76, both hemispheres 76.3
2437 Female, age 94, left hemisphere 75.8
2113 Female, age 91, right hemisphere 67.7
2249 Male, age 74, both hemispheres 64.7
1940 Female, age 85, left hemisphere 59.8
Hippocampus, CA3
nTPM: 69.3
1891 Female, age 85, both hemispheres 83.0
1867 Male, age 76, both hemispheres 77.2
2137 Male, age 80, left hemisphere 73.4
2861 Female, age 67, both hemispheres 70.6
2620 Female, age 94, left hemisphere 57.3
2436 Male, age 74, both hemispheres 54.4
Parahippocampal cortex
nTPM: 71.1
2018 Male, age 76, both hemispheres 79.0
1850 Male, age 80, both hemispheres 77.7
2250 Female, age 67, right hemisphere 75.3
2622 Female, age 67, right hemisphere 72.5
1990 Female, age 91, right hemisphere 70.6
1933 Female, age 85, both hemispheres 69.9
2693 Female, age 94, both hemispheres 69.9
2245 Female, age 91, both hemispheres 68.4
2692 Male, age 74, both hemispheres 66.0
2532 Female, age 72, left hemisphere 61.9
Perirhinal gyrus
nTPM: 78.4
1841 Female, age 85, right hemisphere 97.8
1847 Female, age 91, left hemisphere 85.7
1794 Male, age 80, right hemisphere 77.6
2848 Male, age 76, right hemisphere 69.6
2521 Female, age 94, right hemisphere 61.5
Subiculum
nTPM: 69.8
1901 Male, age 80, both hemispheres 78.3
2042 Male, age 76, both hemispheres 75.1
2438 Female, age 94, left hemisphere 73.1
1977 Female, age 85, both hemispheres 70.7
2729 Female, age 91, right hemisphere 61.8
2619 Male, age 74, both hemispheres 59.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.8
Samples: 197

Max nTPM: 25.6
Min nTPM: 8.0
Std nTPM: 3.3
Median nTPM: 15.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 25.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 25.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 22.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 22.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 21.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 21.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 21.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 21.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 21.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 65.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.2
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 52.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 48.1
Pig sample Sample description nTPM
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 43.5
Min nTPM: 31.1
Sample A Female 43.5
Sample B Female 32.8
Sample C Male 31.1
Sample D Male 36.7
Dorsal hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 61.7
Min nTPM: 32.1
Sample A Female 61.7
Sample B Female 44.0
Sample C Male 54.4
Sample D Male 32.1
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 55.3
Min nTPM: 35.2
Sample A Female 43.9
Sample B Female 55.3
Sample C Male 37.7
Sample D Male 35.2
Ventral hippocampus
nTPM: 37.7
Samples: 4

Max nTPM: 48.9
Min nTPM: 27.4
Sample A Female 48.9
Sample B Female 27.4
Sample C Male 35.1
Sample D Male 39.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 88.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.5
Samples: 4

Max nTPM: 102.8
Min nTPM: 67.8
Sample A Male 98.8
Sample B Male 102.8
Sample C Female 80.5
Sample D Female 67.8
Hippocampal formation
nTPM: 88.7
Samples: 4

Max nTPM: 95.1
Min nTPM: 82.5
Sample A Male 87.4
Sample B Male 82.5
Sample C Female 95.1
Sample D Female 89.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
532588 Antisense, RP_040810_02_C11, Mouse strain C57BL/6J (56 days, male) 13.3

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