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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:104.4 nTPM
HPA Brain:109.3 nTPM
GTEx:104.4 nTPM
FANTOM5:456.3 Scaled Tags Per Million
Pig:70.7 nTPM
Mouse:180.5 nTPM
Allen mouse:20.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011777
Glial cells High
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 101.9
2290 Female, age 72, unknown 132.9
1857 Female, age 85, left hemisphere 122.5
2289 Male, age 61, right hemisphere 113.8
2288 Male, age 75, left hemisphere 106.0
2846 Female, age 79, unknown 102.8
1854 Male, age 80, left hemisphere 100.6
1781 Male, age 74, unknown 90.6
2481 Female, age 94, left hemisphere 46.3
Globus pallidus, externus
nTPM: 23.6
2646 Male, age 61, right hemisphere 37.3
2395 Male, age 75, both hemispheres 27.6
2567 Female, age 72, unknown 21.1
2772 Female, age 79, unknown 16.1
1996 Male, age 80, right hemisphere 16.0
Globus pallidus, internus
nTPM: 19.5
2483 Female, age 94, right hemisphere 29.4
2566 Female, age 72, unknown 25.1
1818 Male, age 74, unknown 24.1
2037 Male, age 80, right hemisphere 18.6
2287 Male, age 75, right hemisphere 18.6
2111 Female, age 85, right hemisphere 11.5
2778 Female, age 91, both hemispheres 8.9
Nucleus accumbens
nTPM: 109.3
1856 Female, age 91, right hemisphere 160.3
1783 Male, age 74, unknown 142.7
2824 Male, age 61, right hemisphere 132.6
2698 Female, age 72, unknown 128.0
1806 Female, age 85, left hemisphere 110.0
2286 Male, age 75, left hemisphere 90.7
2732 Male, age 80, right hemisphere 59.5
2391 Female, age 94, left hemisphere 50.5
Nucleus basalis of Meynert
nTPM: 74.4
2484 Female, age 94, left hemisphere 96.6
2393 Male, age 80, right hemisphere 74.5
2821 Male, age 75, both hemispheres 72.9
2569 Male, age 61, both hemispheres 53.7
Nucleus of the diagonal band
nTPM: 62.5
2195 Female, age 85, both hemispheres 81.2
1979 Male, age 74, unknown 69.6
1812 Female, age 91, both hemispheres 59.9
2775 Male, age 80, right hemisphere 59.5
2029 Male, age 61, right hemisphere 42.4
Putamen
nTPM: 94.8
1838 Male, age 80, right hemisphere 120.5
1937 Female, age 91, right hemisphere 106.5
1829 Male, age 74, unknown 101.1
2489 Female, age 72, unknown 98.2
2647 Male, age 75, left hemisphere 89.8
2466 Female, age 79, unknown 86.7
2482 Female, age 94, left hemisphere 60.8
Septal nuclei
nTPM: 57.5
1960 Male, age 74, unknown 86.3
2629 Female, age 94, right hemisphere 68.5
2059 Female, age 85, both hemispheres 67.0
2009 Female, age 91, both hemispheres 51.2
2394 Male, age 61, left hemisphere 49.6
2031 Female, age 72, unknown 42.0
2199 Male, age 80, right hemisphere 38.1
Stria terminalis, bed nucleus
nTPM: 60.6
2486 Female, age 94, both hemispheres 79.3
1974 Female, age 91, both hemispheres 51.5
2201 Male, age 74, unknown 51.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 73.0
Samples: 246

Max nTPM: 163.2
Min nTPM: 4.4
Std nTPM: 37.1
Median nTPM: 73.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 163.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 149.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 146.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 142.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 142.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 141.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 141.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 140.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 140.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 139.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 137.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 136.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 135.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 135.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 135.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 134.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 133.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 130.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 128.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 127.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 126.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 126.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 125.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 125.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 124.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 122.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 122.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 122.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 121.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 119.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 117.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 115.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 115.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 113.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 112.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 112.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 111.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 111.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 111.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 110.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 110.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 110.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 108.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 108.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 107.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 106.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 105.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 105.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 105.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 104.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 103.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 103.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 103.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 102.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 102.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 102.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 101.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 101.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 100.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 100.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 99.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 98.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 97.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 97.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 96.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 96.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 96.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 96.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 96.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 95.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 95.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 94.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 94.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 94.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 94.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 94.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 93.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 93.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 91.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 91.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 90.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 90.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 89.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 88.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 88.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 88.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 87.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 87.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 87.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 86.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 86.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 85.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 83.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 83.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 82.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 82.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 81.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 78.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 78.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 77.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 77.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 77.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 77.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 76.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 76.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 76.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 75.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 74.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 74.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 74.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 74.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 73.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 73.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 72.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 71.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 71.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 70.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 70.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 69.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 68.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 68.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 67.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 67.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 66.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 66.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 64.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 63.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 62.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 61.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 61.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 60.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 60.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 59.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 59.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 58.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 57.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 57.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 55.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 55.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 55.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 54.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 52.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 52.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 52.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 51.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 51.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 50.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 50.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 48.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 47.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 46.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 45.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 45.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 44.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 44.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 42.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 42.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 41.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 40.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 40.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 38.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 38.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 37.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 36.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 35.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 35.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 34.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 34.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 33.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 33.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 33.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 31.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 31.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 31.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 31.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 30.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 29.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 27.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 27.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 26.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 25.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 24.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 24.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 23.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 23.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 22.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 22.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 22.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 22.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 22.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 22.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 21.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 21.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 21.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 20.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 20.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 20.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 19.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 19.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 18.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 17.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 17.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 16.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 15.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 11.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 11.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 5.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 4.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 104.4
Samples: 246

Max nTPM: 220.2
Min nTPM: 1.4
Std nTPM: 50.1
Median nTPM: 107.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 220.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 214.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 211.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 203.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 201.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 200.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 196.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 195.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 193.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 186.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 185.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 182.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 182.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 181.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 181.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 180.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 180.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 177.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 177.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 174.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 173.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 173.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 172.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 169.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 168.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 167.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 167.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 165.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 164.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 163.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 162.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 158.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 157.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 157.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 157.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 156.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 155.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 155.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 155.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 154.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 154.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 153.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 153.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 152.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 151.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 150.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 150.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 150.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 149.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 149.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 149.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 149.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 148.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 147.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 147.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 145.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 144.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 143.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 143.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 143.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 143.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 142.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 141.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 141.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 140.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 139.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 138.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 137.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 137.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 137.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 136.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 135.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 133.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 133.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 132.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 132.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 132.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 130.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 130.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 129.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 128.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 128.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 128.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 128.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 127.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 126.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 125.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 124.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 124.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 124.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 123.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 123.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 122.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 122.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 121.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 120.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 120.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 118.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 118.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 117.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 117.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 117.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 116.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 116.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 116.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 116.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 115.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 115.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 114.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 114.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 113.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 113.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 113.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 111.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 110.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 110.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 109.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 109.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 109.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 109.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 109.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 108.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 107.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 107.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 106.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 105.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 105.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 105.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 105.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 104.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 103.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 103.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 103.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 102.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 102.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 101.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 101.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 100.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 100.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 100.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 100.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 100.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 99.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 99.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 99.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 98.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 97.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 97.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 97.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 96.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 96.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 95.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 94.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 94.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 93.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 91.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 90.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 90.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 90.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 89.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 89.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 89.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 89.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 88.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 88.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 86.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 86.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 84.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 81.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 81.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 81.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 80.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 80.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 77.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 77.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 76.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 76.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 76.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 75.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 73.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 71.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 71.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 70.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 68.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 68.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 66.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 66.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 64.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 62.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 61.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 59.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 58.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 54.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 54.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 51.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 51.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 50.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 49.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 49.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 48.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 48.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 47.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 46.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 45.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 43.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 43.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 42.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 40.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 40.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 40.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 39.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 39.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 39.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 39.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 37.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 36.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 35.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 33.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 31.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 31.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 30.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 30.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 30.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 29.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 29.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 28.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 27.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 27.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 26.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 25.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 25.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 23.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 20.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 20.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 19.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 19.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 19.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 18.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 12.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 9.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 9.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 9.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 8.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 7.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.4
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Brain - Putamen (basal ganglia)
Average nTPM: 63.7
Samples: 205

Max nTPM: 174.2
Min nTPM: 3.9
Std nTPM: 35.9
Median nTPM: 61.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 174.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 144.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 142.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 140.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 137.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 136.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 128.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 126.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 126.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 124.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 122.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 119.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 117.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 116.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 115.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 113.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 113.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 113.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 111.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 110.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 109.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 108.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 108.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 106.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 105.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 104.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 103.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 102.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 102.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 101.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 100.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 100.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 100.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 98.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 98.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 97.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 97.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 96.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 96.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 96.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 96.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 95.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 95.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 95.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 94.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 94.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 94.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 93.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 93.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 93.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 93.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 92.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 92.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 92.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 91.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 90.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 90.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 89.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 88.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 88.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 88.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 87.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 86.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 85.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 85.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 84.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 84.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 84.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 84.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 84.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 83.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 81.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 81.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 81.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 81.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 79.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 79.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 79.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 78.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 78.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 77.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 77.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 76.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 74.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 74.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 73.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 72.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 71.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 69.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 69.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 68.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 66.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 66.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 64.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 64.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 63.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 63.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 63.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 62.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 62.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 61.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 61.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 60.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 60.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 60.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 60.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 60.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 59.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 58.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 57.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 57.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 57.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 57.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 57.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 57.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 55.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 54.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 54.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 54.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 54.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 53.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 53.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 52.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 52.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 51.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 51.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 48.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 48.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 48.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 46.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 45.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 43.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 43.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 42.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 42.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 42.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 41.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 40.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 40.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 39.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 39.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 38.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 35.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 34.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 34.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 33.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 32.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 32.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 32.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 30.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 30.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 26.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 26.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 26.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 25.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 25.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 24.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 24.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 23.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 23.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 23.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 23.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 22.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 22.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 21.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 21.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 20.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 20.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 20.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 17.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 17.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 16.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 14.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 13.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 13.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 13.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 13.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 13.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 12.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 11.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 10.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 8.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 3.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

456.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 267.1
FF:10164-103B2 76 years, female 267.1
Nucleus accumbens
Scaled Tags Per Million: 199.1
FF:10037-101F1 23-56 years, mixed 199.1
Putamen
Scaled Tags Per Million: 456.3
FF:10176-103C5 60 years, female 456.3
Globus pallidus
Scaled Tags Per Million: 42.6
FF:10175-103C4 60 years, female 56.5
FF:10161-103A8 76 years, female 28.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.7
Pig sample Sample description nTPM
Caudate
nTPM: 70.7
Samples: 4

Max nTPM: 90.5
Min nTPM: 43.5
Sample A Female 43.5
Sample B Female 68.0
Sample C Male 90.5
Sample D Male 80.8
Putamen
nTPM: 59.5
Samples: 4

Max nTPM: 80.8
Min nTPM: 24.7
Sample A Female 24.7
Sample B Female 52.6
Sample C Male 80.8
Sample D Male 80.0
Septum
nTPM: 42.7
Samples: 4

Max nTPM: 63.1
Min nTPM: 24.1
Sample A Female 53.9
Sample B Female 63.1
Sample C Male 29.6
Sample D Male 24.1
Ventral pallidum
nTPM: 53.1
Samples: 4

Max nTPM: 71.2
Min nTPM: 42.1
Sample A Female 71.2
Sample B Female 42.1
Sample C Male 44.8
Sample D Male 54.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

180.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 180.5
Samples: 4

Max nTPM: 224.0
Min nTPM: 142.5
Sample A Male 224.0
Sample B Male 199.3
Sample C Female 142.5
Sample D Female 156.1
Septum
nTPM: 78.4
Samples: 4

Max nTPM: 83.5
Min nTPM: 72.8
Sample A Male 83.5
Sample B Male 81.2
Sample C Female 76.2
Sample D Female 72.8
Ventral forebrain
nTPM: 140.4
Samples: 4

Max nTPM: 145.2
Min nTPM: 136.4
Sample A Male 143.1
Sample B Male 136.4
Sample C Female 136.8
Sample D Female 145.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 20.9
71063725 Antisense, RP_050725_03_C03, Mouse strain C57BL/6J (56 days, male) 22.4
68911028 Antisense, RP_050203_02_G08, Mouse strain C57BL/6J (56 days, male) 19.4
Pallidum
Expression energy: 12.6
68911028 Antisense, RP_050203_02_G08, Mouse strain C57BL/6J (56 days, male) 13.8
71063725 Antisense, RP_050725_03_C03, Mouse strain C57BL/6J (56 days, male) 11.5

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