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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Low
Cells in molecular layer: Not detected
Purkinje cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:101.8 nTPM
HPA Brain:213.3 nTPM
GTEx:101.8 nTPM
FANTOM5:21.8 Scaled Tags Per Million
Pig:139.0 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046164
Purkinje cells Low
Cells in granular layer Low
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 213.3
1768 Female, age 72, unknown 293.2
1769 Male, age 76, right hemisphere 263.4
1774 Male, age 80, left hemisphere 222.7
2006 Male, age 61, right hemisphere 215.4
2055 Female, age 91, right hemisphere 211.6
1788 Male, age 55, unknown 188.5
2003 Female, age 85, right hemisphere 168.4
2101 Male, age 74, right hemisphere 143.0
Cerebellar nuclei
nTPM: 161.9
2783 Female, age 72, unknown 197.9
2175 Male, age 61, right hemisphere 184.3
2005 Male, age 80, left hemisphere 169.7
1871 Male, age 74, unknown 168.1
1879 Male, age 55, unknown 165.9
1966 Female, age 91, left hemisphere 153.1
2882 Male, age 76, left hemisphere 141.7
2177 Female, age 85, both hemispheres 139.4
2318 Male, age 74, left hemisphere 136.7
Flocculonodular lobe
nTPM: 194.8
1767 Male, age 76, left hemisphere 241.5
1771 Male, age 80, left hemisphere 232.4
1765 Male, age 55, unknown 213.0
1792 Male, age 74, unknown 177.1
2176 Female, age 91, right hemisphere 173.1
2004 Male, age 61, right hemisphere 166.5
1835 Female, age 85, right hemisphere 160.2
Vermis
nTPM: 176.8
1770 Male, age 76, left hemisphere 280.1
1928 Female, age 72, unknown 203.5
1778 Female, age 91, left hemisphere 194.6
2834 Male, age 80, left hemisphere 185.6
1766 Male, age 55, unknown 179.7
1825 Male, age 74, unknown 177.1
1988 Female, age 85, left hemisphere 143.9
1751 Male, age 74, right hemisphere 133.2
2460 Male, age 61, both hemispheres 93.6

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.8
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 101.8
Samples: 215

Max nTPM: 170.1
Min nTPM: 44.7
Std nTPM: 26.4
Median nTPM: 101.8
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 170.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 169.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 168.2
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 167.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 166.0
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 161.1
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 155.0
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 154.7
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 154.3
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 151.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 147.4
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 146.2
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 145.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 145.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 142.6
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 142.1
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 141.7
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 138.1
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 137.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 137.6
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 136.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 136.0
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 135.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 135.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 133.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 133.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 131.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 131.6
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 130.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 130.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 130.3
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 129.8
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 129.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 129.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 128.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 128.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 127.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 127.7
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 127.7
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 127.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 127.1
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 126.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 124.7
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 124.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 124.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 123.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 122.8
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 122.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 121.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 121.9
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 121.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 121.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 121.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 119.5
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 119.4
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 119.2
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 119.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 118.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 118.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 117.1
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 116.8
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 116.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 116.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 116.2
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 115.9
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 114.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 114.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 113.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 113.1
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 112.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 111.9
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 111.3
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 111.2
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 110.2
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 109.8
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 109.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 109.2
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 108.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 108.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 108.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 107.9
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 107.8
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 107.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 107.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 106.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 106.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 106.2
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 106.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 105.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 105.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 105.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 105.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 105.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 104.8
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 103.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 103.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 103.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 103.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 103.2
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 102.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 102.6
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 102.5
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 102.3
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 102.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 102.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 101.9
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 101.9
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 101.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 101.5
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 101.5
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 101.3
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 100.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 100.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 99.5
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 99.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 99.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 98.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 97.8
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 96.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 96.3
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 96.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 96.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 95.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 95.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 95.4
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 95.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 94.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 94.0
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 93.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 92.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 92.1
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 92.1
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 91.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 91.8
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 91.6
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 90.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 89.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 89.4
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 89.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 89.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 88.9
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 88.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 88.4
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 87.9
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 87.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 86.9
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 86.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 86.8
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 86.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 86.3
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 86.3
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 86.2
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 85.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 84.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 84.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 84.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 83.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 83.7
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 82.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 82.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 81.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 81.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 81.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 81.4
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 80.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 80.4
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 80.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 79.7
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 79.5
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 79.5
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 79.3
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 78.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 78.6
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 78.4
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 78.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 78.1
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 77.9
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 77.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 76.9
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 76.4
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 76.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 75.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 75.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 74.7
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 74.1
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 73.6
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 73.3
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 73.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 73.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 72.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 70.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 70.2
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 70.1
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 69.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 69.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 68.2
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 67.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 66.3
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 62.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 61.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 61.8
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 61.3
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 61.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 60.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 59.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 59.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 58.5
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 57.2
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 55.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 54.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 53.4
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 53.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 50.7
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 48.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 44.7
Show allShow less
Brain - Cerebellum
Average nTPM: 77.1
Samples: 241

Max nTPM: 135.8
Min nTPM: 41.4
Std nTPM: 17.7
Median nTPM: 75.8
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 135.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 133.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 130.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 124.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 118.8
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 117.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 112.7
GTEX-145LS-3026-SM-5O99S 60-69 years, female 110.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 109.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 108.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 107.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 106.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 106.1
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 105.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 105.6
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 104.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 104.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 103.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 103.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 103.2
GTEX-1192X-3226-SM-5987D 50-59 years, male 103.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 102.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 101.3
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 101.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 101.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 100.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 99.8
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 99.7
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 97.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 97.7
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 97.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 96.7
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 96.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 96.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 95.7
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 95.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 95.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 94.7
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 94.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 94.3
GTEX-1B933-3026-SM-731DB 50-59 years, female 93.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 93.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 93.4
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 93.4
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 93.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 93.0
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 92.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 92.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 92.4
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 92.3
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 91.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 91.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 91.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 91.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 90.9
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 90.7
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 89.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 89.5
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 88.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 88.2
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 88.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 88.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 88.0
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 87.0
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 87.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 86.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 86.6
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 86.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 86.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 85.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 85.5
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 85.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 84.4
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 84.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 84.2
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 83.8
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 83.8
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 83.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 83.2
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 83.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 82.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 82.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 82.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 82.2
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 82.0
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 81.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 81.8
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 81.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 81.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 81.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 81.5
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 81.3
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 81.1
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 81.1
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 80.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 80.2
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 80.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 80.1
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 79.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 79.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 79.9
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 79.9
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 79.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 79.4
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 79.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 79.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 78.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 78.8
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 78.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 78.5
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 78.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 78.4
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 78.0
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 77.7
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 77.4
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 77.1
GTEX-X261-3126-SM-4PQZC 50-59 years, male 77.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 76.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 76.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 76.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 75.8
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 75.7
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 75.1
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 75.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 74.8
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 74.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 74.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 74.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 73.9
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 73.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 73.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 73.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 73.2
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 73.2
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 73.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 73.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 73.1
GTEX-14E6D-2926-SM-664OP 50-59 years, male 72.5
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 72.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 72.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 72.0
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 72.0
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 71.8
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 71.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 71.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 71.8
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 71.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 71.4
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 71.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 70.9
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 70.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 70.4
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 70.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 70.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 69.8
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 69.8
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 69.5
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 69.4
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 69.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 69.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 68.9
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 68.9
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 68.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 68.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 68.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 68.2
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 68.1
GTEX-12126-0926-SM-5FQTW 20-29 years, male 67.9
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 67.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 67.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 67.3
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 66.9
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 66.5
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 66.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 65.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 65.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 65.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 65.4
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 65.0
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 64.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 64.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 64.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 64.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 64.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 64.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 64.1
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 63.8
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 63.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 63.5
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 63.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 62.8
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 62.7
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 62.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 62.3
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 61.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 60.5
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 60.3
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 59.9
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 59.5
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 58.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 58.7
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 58.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 58.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 58.1
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 57.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 57.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 56.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 56.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 56.5
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 56.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 55.9
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 55.8
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 55.6
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 55.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 55.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 55.4
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 53.8
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 53.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 53.5
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 53.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 52.9
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 52.2
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 52.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 51.8
GTEX-17HII-2926-SM-79OMK 50-59 years, male 51.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 51.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 50.7
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 50.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 50.5
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 50.3
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 50.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 49.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 48.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 48.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 47.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 47.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 46.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 45.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 45.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 44.7
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 41.4
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

21.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 21.8
FF:10166-103B4 76 years, female 22.0
FF:10083-102B2 22-68 years, mixed 21.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 139.0
Samples: 4

Max nTPM: 188.0
Min nTPM: 114.6
Sample A Female 188.0
Sample B Female 134.4
Sample C Male 114.6
Sample D Male 119.1

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