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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BICRA
Synonyms GLTSCR1, SMARCK1
Gene descriptioni

Full gene name according to HGNC.

BRD4 interacting chromatin remodeling complex associated protein
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband q13.33
Chromosome location (bp) 47608196 - 47703277
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000063169 (version 109)
Entrez gene 29998
HGNC HGNC:4332
UniProt Q9NZM4 (UniProt - Evidence at protein level)
neXtProt NX_Q9NZM4
GeneCards BICRA
Antibodypedia BICRA antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of SWI/SNF chromatin remodeling subcomplex GBAF that carries out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner 1. May play a role in BRD4-mediated gene transcription 2.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables transcription regulator activator activity. Involved in positive regulation of transcription, DNA-templated. Located in nucleus. Part of SWI/SNF complex. Implicated in Coffin-Siris syndrome. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
BICRA-201
ENSP00000379946
ENST00000396720
Q9NZM4
[Direct mapping] BRD4-interacting chromatin-remodeling complex-associated protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0008284 [positive regulation of cell population proliferation]
GO:0016514 [SWI/SNF complex]
GO:0045596 [negative regulation of cell differentiation]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0140288 [GBAF complex]
GO:0140537 [transcription regulator activator activity]
GO:1902459 [positive regulation of stem cell population maintenance]
Show all
1560 aa
158.5 kDa
No 0
BICRA-202
ENSP00000469738
ENST00000594866
Q9NZM4
[Direct mapping] BRD4-interacting chromatin-remodeling complex-associated protein
Show all
M0QYC3
[Direct mapping] BRD4-interacting chromatin-remodeling complex-associated protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0008284 [positive regulation of cell population proliferation]
GO:0016514 [SWI/SNF complex]
GO:0045596 [negative regulation of cell differentiation]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0140288 [GBAF complex]
GO:0140537 [transcription regulator activator activity]
GO:1902459 [positive regulation of stem cell population maintenance]
Show all
1560 aa
158.5 kDa
No 0
BICRA-204
ENSP00000480219
ENST00000614245
Q9NZM4
[Direct mapping] BRD4-interacting chromatin-remodeling complex-associated protein
Show all
A0A087WWH3
[Direct mapping] BRD4-interacting chromatin-remodeling complex-associated protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0008284 [positive regulation of cell population proliferation]
GO:0016514 [SWI/SNF complex]
GO:0045596 [negative regulation of cell differentiation]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0140288 [GBAF complex]
GO:0140537 [transcription regulator activator activity]
GO:1902459 [positive regulation of stem cell population maintenance]
Show all
1318 aa
134.2 kDa
No 0

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