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BCAS1
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  • BCAS1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:489.8 nTPM
HPA Brain:919.6 nTPM
GTEx:489.8 nTPM
FANTOM5:894.6 Scaled Tags Per Million
Pig:445.4 nTPM
Mouse:143.6 nTPM
Allen mouse:2.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051816Antibody HPA054745Antibody CAB033558
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

919.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 200.9
2846 Female, age 79, unknown 313.4
2288 Male, age 75, left hemisphere 276.2
1854 Male, age 80, left hemisphere 212.8
2290 Female, age 72, unknown 198.3
1781 Male, age 74, unknown 196.9
2481 Female, age 94, left hemisphere 147.8
2289 Male, age 61, right hemisphere 141.1
1857 Female, age 85, left hemisphere 120.3
Globus pallidus, externus
nTPM: 919.6
2567 Female, age 72, unknown 1478.9
2646 Male, age 61, right hemisphere 1096.1
1996 Male, age 80, right hemisphere 888.1
2772 Female, age 79, unknown 596.8
2395 Male, age 75, both hemispheres 537.9
Globus pallidus, internus
nTPM: 848.1
2566 Female, age 72, unknown 1211.4
2111 Female, age 85, right hemisphere 1108.1
2483 Female, age 94, right hemisphere 811.8
2778 Female, age 91, both hemispheres 776.0
1818 Male, age 74, unknown 724.0
2287 Male, age 75, right hemisphere 683.3
2037 Male, age 80, right hemisphere 622.1
Nucleus accumbens
nTPM: 279.8
2698 Female, age 72, unknown 553.4
2732 Male, age 80, right hemisphere 427.2
2391 Female, age 94, left hemisphere 367.4
1783 Male, age 74, unknown 221.0
1806 Female, age 85, left hemisphere 219.2
2286 Male, age 75, left hemisphere 197.0
2824 Male, age 61, right hemisphere 153.5
1856 Female, age 91, right hemisphere 99.5
Nucleus basalis of Meynert
nTPM: 544.2
2569 Male, age 61, both hemispheres 1183.3
2821 Male, age 75, both hemispheres 412.5
2484 Female, age 94, left hemisphere 334.2
2393 Male, age 80, right hemisphere 247.0
Nucleus of the diagonal band
nTPM: 103.2
1812 Female, age 91, both hemispheres 172.4
1979 Male, age 74, unknown 126.7
2029 Male, age 61, right hemisphere 79.9
2775 Male, age 80, right hemisphere 73.7
2195 Female, age 85, both hemispheres 63.2
Putamen
nTPM: 317.0
2647 Male, age 75, left hemisphere 514.3
2489 Female, age 72, unknown 498.6
1829 Male, age 74, unknown 423.6
2482 Female, age 94, left hemisphere 237.4
1937 Female, age 91, right hemisphere 231.5
2466 Female, age 79, unknown 208.7
1838 Male, age 80, right hemisphere 105.0
Septal nuclei
nTPM: 164.2
2394 Male, age 61, left hemisphere 356.5
2199 Male, age 80, right hemisphere 239.9
2629 Female, age 94, right hemisphere 167.0
2059 Female, age 85, both hemispheres 136.9
2009 Female, age 91, both hemispheres 101.4
2031 Female, age 72, unknown 83.1
1960 Male, age 74, unknown 64.6
Stria terminalis, bed nucleus
nTPM: 166.9
2201 Male, age 74, unknown 207.2
1974 Female, age 91, both hemispheres 203.7
2486 Female, age 94, both hemispheres 89.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

489.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 259.9
Samples: 246

Max nTPM: 1560.7
Min nTPM: 31.7
Std nTPM: 205.5
Median nTPM: 199.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1560.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1283.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1065.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 858.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 855.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 829.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 807.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 765.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 718.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 684.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 676.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 654.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 645.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 607.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 602.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 600.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 595.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 591.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 583.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 575.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 540.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 522.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 491.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 489.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 488.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 488.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 485.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 481.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 475.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 472.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 470.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 466.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 455.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 452.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 450.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 449.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 449.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 435.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 429.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 417.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 406.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 404.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 402.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 399.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 393.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 388.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 384.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 382.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 372.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 356.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 352.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 349.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 346.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 346.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 346.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 344.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 343.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 333.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 332.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 330.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 329.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 324.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 324.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 323.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 318.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 318.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 316.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 311.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 311.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 307.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 305.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 303.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 301.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 300.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 300.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 300.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 296.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 293.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 291.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 290.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 288.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 283.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 283.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 281.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 281.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 279.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 277.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 275.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 269.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 268.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 267.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 267.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 262.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 261.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 260.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 260.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 254.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 249.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 249.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 244.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 243.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 240.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 237.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 237.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 236.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 235.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 229.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 225.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 225.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 220.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 217.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 215.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 211.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 211.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 210.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 209.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 205.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 205.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 204.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 202.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 202.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 201.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 199.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 198.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 196.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 195.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 192.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 190.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 190.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 190.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 189.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 189.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 185.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 185.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 183.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 182.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 181.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 177.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 174.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 172.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 171.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 169.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 168.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 165.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 165.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 165.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 160.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 159.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 159.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 158.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 156.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 155.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 154.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 151.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 150.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 147.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 147.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 147.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 147.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 144.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 144.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 141.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 139.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 138.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 137.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 137.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 137.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 135.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 135.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 134.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 134.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 132.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 132.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 131.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 131.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 131.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 130.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 129.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 129.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 128.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 128.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 127.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 127.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 126.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 126.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 125.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 125.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 122.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 121.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 120.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 119.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 115.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 113.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 112.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 111.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 110.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 107.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 107.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 106.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 105.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 104.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 103.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 101.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 101.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 101.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 99.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 99.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 98.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 98.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 94.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 94.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 93.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 92.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 92.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 91.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 90.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 86.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 85.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 85.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 83.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 81.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 74.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 73.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 72.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 70.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 69.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 69.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 68.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 64.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 64.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 62.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 60.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 60.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 57.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 48.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 46.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 42.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 221.3
Samples: 246

Max nTPM: 1548.7
Min nTPM: 20.7
Std nTPM: 234.0
Median nTPM: 138.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1548.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1291.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1245.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1058.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1043.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1029.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 950.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 753.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 745.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 741.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 725.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 694.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 677.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 661.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 651.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 642.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 640.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 625.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 611.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 610.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 596.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 592.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 584.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 570.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 532.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 496.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 480.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 478.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 468.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 465.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 447.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 432.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 414.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 398.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 387.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 374.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 373.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 371.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 366.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 361.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 358.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 350.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 343.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 339.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 333.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 332.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 330.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 320.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 317.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 311.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 305.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 304.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 299.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 296.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 296.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 293.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 292.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 292.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 278.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 276.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 271.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 271.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 269.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 257.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 255.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 253.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 252.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 245.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 243.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 240.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 238.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 237.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 235.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 234.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 234.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 229.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 225.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 224.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 222.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 219.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 218.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 217.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 214.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 212.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 212.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 212.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 206.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 204.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 204.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 200.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 200.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 198.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 194.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 193.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 192.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 191.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 189.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 186.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 184.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 178.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 178.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 175.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 175.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 174.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 173.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 173.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 169.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 168.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 167.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 167.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 164.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 164.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 160.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 157.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 156.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 155.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 153.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 153.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 150.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 148.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 141.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 139.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 138.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 137.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 136.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 135.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 134.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 134.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 131.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 131.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 130.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 130.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 128.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 125.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 125.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 124.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 120.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 119.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 117.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 117.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 116.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 116.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 114.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 114.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 114.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 113.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 112.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 111.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 111.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 110.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 107.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 107.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 106.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 103.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 100.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 99.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 98.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 95.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 94.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 93.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 93.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 93.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 92.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 90.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 90.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 89.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 88.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 88.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 88.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 87.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 87.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 86.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 85.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 85.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 82.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 82.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 82.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 80.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 78.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 78.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 77.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 77.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 75.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 74.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 74.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 74.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 73.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 73.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 72.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 72.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 69.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 68.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 67.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 66.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 64.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 62.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 61.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 61.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 56.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 56.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 55.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 55.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 54.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 54.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 53.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 53.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 52.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 52.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 52.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 51.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 51.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 50.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 50.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 50.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 50.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 49.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 47.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 45.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 45.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 44.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 44.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 43.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 42.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 42.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 42.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 41.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 37.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 36.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 36.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 36.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 36.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 35.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 32.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 31.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 31.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 30.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 29.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 29.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 23.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 22.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 20.7
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Brain - Putamen (basal ganglia)
Average nTPM: 489.8
Samples: 205

Max nTPM: 1960.5
Min nTPM: 63.2
Std nTPM: 324.3
Median nTPM: 419.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1960.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1846.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1772.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1577.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1389.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1317.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1297.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1270.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1205.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1193.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1187.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1154.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1152.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1118.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1090.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 983.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 976.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 939.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 929.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 898.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 857.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 851.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 836.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 831.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 813.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 812.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 805.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 761.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 749.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 739.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 733.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 727.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 706.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 697.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 697.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 689.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 669.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 668.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 654.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 653.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 652.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 651.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 648.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 646.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 642.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 639.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 633.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 631.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 625.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 624.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 617.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 612.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 609.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 583.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 573.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 572.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 565.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 561.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 560.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 554.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 549.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 549.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 548.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 547.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 543.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 543.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 533.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 532.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 531.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 530.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 517.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 506.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 506.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 494.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 493.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 488.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 486.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 483.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 481.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 477.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 473.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 469.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 468.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 459.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 458.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 451.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 450.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 448.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 445.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 441.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 440.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 440.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 440.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 438.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 438.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 437.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 435.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 428.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 426.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 422.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 421.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 419.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 419.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 416.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 416.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 415.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 413.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 410.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 406.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 405.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 401.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 400.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 400.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 400.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 399.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 395.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 390.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 389.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 383.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 379.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 375.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 374.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 373.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 371.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 363.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 363.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 361.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 361.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 359.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 356.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 345.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 345.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 344.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 339.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 333.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 333.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 331.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 329.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 326.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 325.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 325.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 321.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 317.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 311.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 303.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 303.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 303.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 301.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 298.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 295.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 291.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 290.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 288.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 282.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 282.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 278.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 276.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 271.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 269.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 269.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 265.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 261.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 261.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 257.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 256.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 255.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 251.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 239.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 231.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 229.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 216.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 205.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 204.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 198.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 197.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 194.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 192.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 184.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 182.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 178.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 176.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 175.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 169.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 165.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 163.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 157.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 155.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 152.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 146.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 142.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 134.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 130.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 123.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 117.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 116.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 115.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 114.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 112.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 112.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 111.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 109.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 105.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 98.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 97.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 63.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

894.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 132.3
FF:10164-103B2 76 years, female 132.3
Nucleus accumbens
Scaled Tags Per Million: 395.1
FF:10037-101F1 23-56 years, mixed 395.1
Putamen
Scaled Tags Per Million: 186.1
FF:10176-103C5 60 years, female 186.1
Globus pallidus
Scaled Tags Per Million: 894.6
FF:10161-103A8 76 years, female 904.9
FF:10175-103C4 60 years, female 884.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

445.4
Pig sample Sample description nTPM
Caudate
nTPM: 101.1
Samples: 4

Max nTPM: 124.2
Min nTPM: 72.4
Sample A Female 114.2
Sample B Female 72.4
Sample C Male 124.2
Sample D Male 93.4
Putamen
nTPM: 445.4
Samples: 4

Max nTPM: 671.2
Min nTPM: 195.1
Sample A Female 671.2
Sample B Female 195.1
Sample C Male 441.2
Sample D Male 474.1
Septum
nTPM: 230.0
Samples: 4

Max nTPM: 265.3
Min nTPM: 138.6
Sample A Female 256.5
Sample B Female 138.6
Sample C Male 259.7
Sample D Male 265.3
Ventral pallidum
nTPM: 310.2
Samples: 4

Max nTPM: 509.4
Min nTPM: 113.8
Sample A Female 113.8
Sample B Female 231.1
Sample C Male 509.4
Sample D Male 386.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 143.6
Samples: 4

Max nTPM: 161.5
Min nTPM: 125.0
Sample A Male 146.7
Sample B Male 141.3
Sample C Female 161.5
Sample D Female 125.0
Septum
nTPM: 111.9
Samples: 4

Max nTPM: 159.2
Min nTPM: 85.7
Sample A Male 85.7
Sample B Male 94.9
Sample C Female 107.9
Sample D Female 159.2
Ventral forebrain
nTPM: 74.9
Samples: 4

Max nTPM: 85.6
Min nTPM: 66.6
Sample A Male 85.6
Sample B Male 68.8
Sample C Female 66.6
Sample D Female 78.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.1
77371831 Antisense, RP_070116_02_E08, Mouse strain C57BL/6J (56 days, male) 2.1
Pallidum
Expression energy: 2.5
77371831 Antisense, RP_070116_02_E08, Mouse strain C57BL/6J (56 days, male) 2.5

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