We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
OAT
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • OAT
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:80.7 nTPM
HPA Brain:74.6 nTPM
GTEx:80.7 nTPM
FANTOM5:284.1 Scaled Tags Per Million
Pig:54.1 nTPM
Mouse:137.3 nTPM
Allen mouse:1.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040098Antibody CAB033576
Glial cells LowLow
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 63.2
2481 Female, age 94, left hemisphere 80.7
2288 Male, age 75, left hemisphere 79.1
2846 Female, age 79, unknown 63.1
2290 Female, age 72, unknown 62.8
1857 Female, age 85, left hemisphere 61.6
1781 Male, age 74, unknown 56.3
1854 Male, age 80, left hemisphere 55.1
2289 Male, age 61, right hemisphere 47.2
Globus pallidus, externus
nTPM: 61.2
2772 Female, age 79, unknown 93.8
2395 Male, age 75, both hemispheres 72.5
1996 Male, age 80, right hemisphere 69.4
2646 Male, age 61, right hemisphere 43.5
2567 Female, age 72, unknown 27.0
Globus pallidus, internus
nTPM: 68.9
2287 Male, age 75, right hemisphere 103.4
2778 Female, age 91, both hemispheres 77.6
1818 Male, age 74, unknown 75.2
2483 Female, age 94, right hemisphere 68.5
2037 Male, age 80, right hemisphere 59.7
2111 Female, age 85, right hemisphere 58.9
2566 Female, age 72, unknown 38.7
Nucleus accumbens
nTPM: 67.5
2286 Male, age 75, left hemisphere 94.3
2391 Female, age 94, left hemisphere 76.7
1856 Female, age 91, right hemisphere 75.6
2824 Male, age 61, right hemisphere 65.2
2698 Female, age 72, unknown 63.4
1806 Female, age 85, left hemisphere 59.0
1783 Male, age 74, unknown 58.7
2732 Male, age 80, right hemisphere 46.9
Nucleus basalis of Meynert
nTPM: 53.4
2821 Male, age 75, both hemispheres 65.7
2484 Female, age 94, left hemisphere 56.9
2393 Male, age 80, right hemisphere 50.8
2569 Male, age 61, both hemispheres 40.3
Nucleus of the diagonal band
nTPM: 74.6
1812 Female, age 91, both hemispheres 91.5
2775 Male, age 80, right hemisphere 81.3
2029 Male, age 61, right hemisphere 77.3
2195 Female, age 85, both hemispheres 68.1
1979 Male, age 74, unknown 55.0
Putamen
nTPM: 55.1
2466 Female, age 79, unknown 68.0
2482 Female, age 94, left hemisphere 67.6
1937 Female, age 91, right hemisphere 67.5
1829 Male, age 74, unknown 59.1
1838 Male, age 80, right hemisphere 50.4
2647 Male, age 75, left hemisphere 40.3
2489 Female, age 72, unknown 32.6
Septal nuclei
nTPM: 66.9
2031 Female, age 72, unknown 90.7
1960 Male, age 74, unknown 73.8
2009 Female, age 91, both hemispheres 73.0
2629 Female, age 94, right hemisphere 72.2
2394 Male, age 61, left hemisphere 57.4
2059 Female, age 85, both hemispheres 51.4
2199 Male, age 80, right hemisphere 49.7
Stria terminalis, bed nucleus
nTPM: 71.5
1974 Female, age 91, both hemispheres 83.0
2486 Female, age 94, both hemispheres 73.7
2201 Male, age 74, unknown 57.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.6
Samples: 246

Max nTPM: 158.1
Min nTPM: 48.3
Std nTPM: 16.8
Median nTPM: 79.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 158.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 154.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 134.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 129.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 128.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 127.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 124.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 124.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 120.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 112.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 108.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 108.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 106.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 105.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 102.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 101.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 101.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 101.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 99.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 99.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 99.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 99.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 99.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 98.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 97.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 96.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 96.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 95.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 95.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 95.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 95.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 95.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 95.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 95.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 94.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 93.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 93.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 93.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 93.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 93.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 92.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 92.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 91.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 91.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 91.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 91.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 91.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 91.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 91.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 90.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 90.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 90.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 90.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 90.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 90.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 90.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 90.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 90.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 89.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 89.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 88.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 88.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 88.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 88.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 88.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 87.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 87.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 87.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 87.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 87.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 86.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 86.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 86.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 86.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 85.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 85.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 85.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 85.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 85.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 85.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 85.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 85.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 85.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 85.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 85.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 85.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 85.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 85.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 85.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 84.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 84.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 84.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 84.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 84.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 84.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 83.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 83.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 83.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 83.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 82.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 82.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 82.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 82.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 82.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 81.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 81.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 81.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 81.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 81.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 80.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 80.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 80.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 80.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 80.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 80.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 80.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 79.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 79.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 79.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 79.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 79.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 79.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 79.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 79.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 79.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 78.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 78.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 78.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 77.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 76.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 76.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 76.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 76.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 76.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 76.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 76.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 76.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 76.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 75.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 75.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 75.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 75.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 74.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 74.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 74.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 74.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 74.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 73.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 73.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 73.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 72.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 72.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 72.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 72.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 72.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 72.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 71.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 71.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 71.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 71.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 71.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 71.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 71.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 71.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 71.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 71.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 71.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 70.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 70.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 70.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 70.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 69.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 69.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 69.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 69.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 69.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 68.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 68.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 68.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 68.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 68.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 67.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 67.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 67.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 66.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 66.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 66.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 66.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 65.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 65.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 65.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 64.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 64.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 64.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 64.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 63.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 63.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 63.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 63.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 63.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 62.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 62.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 62.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 62.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 61.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 60.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 60.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 59.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 58.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 58.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 56.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 54.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 54.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 52.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 52.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 51.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 50.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 49.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 80.7
Samples: 246

Max nTPM: 131.3
Min nTPM: 43.3
Std nTPM: 15.7
Median nTPM: 81.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 131.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 121.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 120.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 117.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 115.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 111.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 111.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 110.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 109.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 108.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 108.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 107.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 107.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 107.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 104.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 104.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 104.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 103.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 103.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 103.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 102.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 102.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 102.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 102.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 102.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 101.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 101.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 101.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 100.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 98.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 98.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 98.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 98.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 97.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 96.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 96.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 96.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 95.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 95.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 95.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 95.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 95.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 95.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 95.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 95.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 94.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 94.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 94.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 93.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 93.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 93.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 92.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 92.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 92.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 92.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 91.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 90.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 90.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 90.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 90.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 90.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 90.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 90.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 89.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 89.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 89.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 89.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 88.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 88.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 88.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 88.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 88.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 88.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 88.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 87.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 87.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 87.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 86.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 86.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 86.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 86.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 86.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 86.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 86.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 86.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 85.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 85.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 85.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 85.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 85.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 85.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 85.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 85.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 85.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 85.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 84.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 84.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 84.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 84.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 84.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 84.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 84.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 84.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 84.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 83.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 83.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 83.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 83.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 83.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 83.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 83.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 83.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 83.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 83.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 82.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 82.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 82.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 82.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 82.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 81.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 81.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 81.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 81.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 81.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 81.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 81.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 81.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 81.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 81.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 81.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 80.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 79.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 79.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 79.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 79.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 79.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 79.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 79.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 79.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 79.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 78.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 78.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 78.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 78.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 78.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 78.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 78.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 78.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 77.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 77.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 77.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 77.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 76.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 76.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 76.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 76.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 76.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 75.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 75.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 75.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 74.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 74.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 74.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 74.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 73.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 73.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 73.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 73.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 73.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 72.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 72.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 72.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 72.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 71.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 71.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 71.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 71.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 71.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 70.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 70.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 69.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 69.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 69.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 69.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 68.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 68.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 68.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 68.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 68.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 68.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 67.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 67.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 67.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 67.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 66.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 66.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 66.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 66.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 66.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 66.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 65.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 64.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 64.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 64.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 64.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 63.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 63.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 63.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 63.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 63.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 63.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 62.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 62.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 61.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 61.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 61.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 61.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 61.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 60.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 60.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 60.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 60.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 60.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 59.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 58.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 57.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 56.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 56.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 55.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 54.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 53.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 52.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 51.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 51.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 51.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 50.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 48.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 47.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 46.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 45.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 44.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 43.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 75.1
Samples: 205

Max nTPM: 126.4
Min nTPM: 43.6
Std nTPM: 14.1
Median nTPM: 75.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 126.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 122.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 115.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 111.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 109.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 104.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 102.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 98.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 98.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 97.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 96.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 96.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 96.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 95.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 95.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 95.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 92.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 92.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 92.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 91.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 91.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 90.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 90.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 90.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 89.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 89.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 89.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 89.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 88.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 88.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 88.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 88.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 87.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 87.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 87.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 87.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 87.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 87.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 87.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 86.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 86.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 85.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 85.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 84.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 84.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 84.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 84.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 84.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 84.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 83.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 83.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 83.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 83.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 83.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 83.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 82.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 82.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 82.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 82.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 82.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 82.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 82.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 81.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 81.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 81.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 81.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 81.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 81.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 81.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 81.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 80.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 80.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 80.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 79.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 79.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 79.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 79.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 79.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 78.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 78.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 78.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 78.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 77.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 77.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 77.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 77.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 77.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 77.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 77.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 77.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 76.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 76.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 76.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 76.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 76.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 76.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 76.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 76.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 76.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 76.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 76.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 75.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 75.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 75.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 75.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 75.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 74.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 74.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 74.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 73.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 73.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 73.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 73.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 73.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 73.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 72.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 72.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 72.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 72.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 72.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 72.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 71.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 71.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 71.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 71.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 71.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 71.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 71.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 69.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 69.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 69.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 69.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 69.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 68.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 68.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 68.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 68.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 68.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 68.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 68.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 67.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 67.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 67.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 66.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 66.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 66.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 65.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 65.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 65.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 65.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 65.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 64.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 64.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 64.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 64.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 64.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 64.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 63.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 63.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 62.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 62.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 62.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 62.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 62.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 61.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 61.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 60.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 60.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 60.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 60.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 58.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 57.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 57.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 57.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 56.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 55.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 55.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 55.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 55.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 54.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 54.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 54.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 53.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 53.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 52.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 51.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 51.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 51.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 50.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 49.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 49.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 48.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 46.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 45.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 43.6
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

284.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 174.3
FF:10164-103B2 76 years, female 174.3
Nucleus accumbens
Scaled Tags Per Million: 284.1
FF:10037-101F1 23-56 years, mixed 284.1
Putamen
Scaled Tags Per Million: 243.8
FF:10176-103C5 60 years, female 243.8
Globus pallidus
Scaled Tags Per Million: 238.9
FF:10175-103C4 60 years, female 316.2
FF:10161-103A8 76 years, female 161.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.1
Pig sample Sample description nTPM
Caudate
nTPM: 46.8
Samples: 4

Max nTPM: 50.4
Min nTPM: 42.5
Sample A Female 45.4
Sample B Female 50.4
Sample C Male 48.7
Sample D Male 42.5
Putamen
nTPM: 50.5
Samples: 4

Max nTPM: 64.2
Min nTPM: 41.6
Sample A Female 51.7
Sample B Female 41.6
Sample C Male 64.2
Sample D Male 44.3
Septum
nTPM: 54.1
Samples: 4

Max nTPM: 57.5
Min nTPM: 47.4
Sample A Female 56.5
Sample B Female 47.4
Sample C Male 57.5
Sample D Male 55.1
Ventral pallidum
nTPM: 52.1
Samples: 4

Max nTPM: 61.8
Min nTPM: 46.4
Sample A Female 46.6
Sample B Female 53.4
Sample C Male 61.8
Sample D Male 46.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 107.7
Samples: 4

Max nTPM: 111.6
Min nTPM: 102.0
Sample A Male 108.5
Sample B Male 108.5
Sample C Female 102.0
Sample D Female 111.6
Septum
nTPM: 137.3
Samples: 4

Max nTPM: 157.6
Min nTPM: 120.2
Sample A Male 120.2
Sample B Male 157.6
Sample C Female 136.4
Sample D Female 135.1
Ventral forebrain
nTPM: 110.1
Samples: 4

Max nTPM: 118.0
Min nTPM: 103.1
Sample A Male 103.1
Sample B Male 118.0
Sample C Female 114.5
Sample D Female 104.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.4
79539640 Antisense, RP_071018_01_B11, Mouse strain C57BL/6J (56 days, male) 1.4
Pallidum
Expression energy: 1.8
79539640 Antisense, RP_071018_01_B11, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org