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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:109.7 nTPM
GTEx:109.7 nTPM
FANTOM5:201.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031677Antibody CAB020789
Squamous epithelial cells Not detectedNot detected




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 109.7
Samples: 156

Max nTPM: 894.9
Min nTPM: 1.8
Std nTPM: 143.9
Median nTPM: 57.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 894.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 887.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 512.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 501.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 491.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 480.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 403.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 403.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 387.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 377.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 356.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 353.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 333.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 318.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 299.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 288.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 280.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 263.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 236.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 236.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 232.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 228.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 220.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 219.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 200.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 191.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 189.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 188.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 183.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 180.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 178.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 177.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 174.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 174.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 160.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 159.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 148.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 140.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 136.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 133.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 128.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 127.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 126.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 119.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 116.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 114.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 111.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 111.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 100.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 89.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 88.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 86.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 85.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 84.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 81.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 78.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 76.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 74.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 72.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 71.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 71.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 70.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 67.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 67.5
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 67.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 66.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 66.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 63.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 63.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 62.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 62.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 60.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 60.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 60.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 58.6
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 58.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 57.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 57.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 56.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 54.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 54.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 52.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 51.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 51.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 51.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 51.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 50.4
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 48.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 48.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 48.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 48.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 48.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 47.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 47.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 47.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 41.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 41.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 41.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 40.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 39.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 39.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 38.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 36.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 35.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 35.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 34.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 33.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 32.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 32.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 30.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 29.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 28.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 27.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 27.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 27.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 26.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 26.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 25.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 24.9
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 24.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 24.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 23.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 22.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 22.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 19.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 19.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 18.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 17.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 17.6
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 17.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 16.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 16.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 16.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 15.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 14.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 14.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 14.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 10.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 10.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 8.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 8.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 7.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 7.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 6.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 6.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 5.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 5.7
GTEX-S341-1226-SM-4AD5S 40-49 years, female 5.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 4.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 4.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 4.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 4.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 3.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 3.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1.8
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

201.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 201.2
FF:10204-103F6 68 years, female 201.2

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