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COL17A1
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  • COL17A1
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:79.8 nTPM
HPA:26.5 nTPM
GTEx:79.8 nTPM
FANTOM5:44.4 Scaled Tags Per Million

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043673Antibody HPA052963
Glandular cells Not detectedMedium





SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.5
overview
Female, age 68
Salivary gland sample 216
nTPM: 37.3
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 19.6
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 22.5
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.8
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 79.8
Samples: 162

Max nTPM: 372.5
Min nTPM: 10.3
Std nTPM: 50.5
Median nTPM: 67.3
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 372.5
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 318.5
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 269.5
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 239.1
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 201.1
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 193.2
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 187.6
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 187.0
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 184.0
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 175.6
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 173.2
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 173.0
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 159.7
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 150.2
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 147.6
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 144.2
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 140.9
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 139.1
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 130.7
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 126.5
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 124.2
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 119.4
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 115.7
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 114.4
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 112.1
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 107.0
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 100.0
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 93.9
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 93.4
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 89.7
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 88.4
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 87.8
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 87.6
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 87.5
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 87.3
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 85.8
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 85.4
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 84.7
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 83.8
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 83.5
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 82.9
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 82.5
GTEX-13O21-1926-SM-5MR39 50-59 years, male 82.2
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 82.2
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 82.1
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 81.9
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 79.6
GTEX-X261-2426-SM-4PQZU 50-59 years, male 79.2
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 77.7
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 77.3
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 77.1
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 77.1
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 77.0
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 77.0
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 76.6
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 76.0
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 75.6
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 75.4
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 74.1
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 73.3
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 73.0
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 73.0
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 72.5
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 72.4
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 72.1
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 72.1
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 71.9
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 71.3
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 71.1
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 71.0
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 71.0
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 69.7
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 69.4
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 69.3
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 69.1
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 68.7
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 68.1
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 68.0
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 68.0
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 67.6
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 67.4
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 67.2
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 66.5
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 65.8
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 65.7
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 65.6
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 65.5
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 65.2
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 64.0
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 63.6
GTEX-13113-1526-SM-5EGHV 60-69 years, female 63.4
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 63.4
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 62.7
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 62.6
GTEX-1445S-2926-SM-5O993 60-69 years, male 61.3
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 61.3
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 60.8
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 59.6
GTEX-178AV-1426-SM-6LLID 40-49 years, male 59.5
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 58.9
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 58.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 58.5
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 58.5
GTEX-15SHV-2226-SM-6M464 60-69 years, male 58.5
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 58.5
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 58.3
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 57.8
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 57.6
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 57.1
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 56.5
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 56.2
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 56.0
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 55.9
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 55.7
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 55.3
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 55.1
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 54.9
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 54.9
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 54.4
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 54.3
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 53.9
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 53.8
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 53.7
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 53.2
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 53.0
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 52.7
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 52.0
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 51.3
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 50.9
GTEX-11P82-0926-SM-5986X 20-29 years, male 50.8
GTEX-Y111-2626-SM-4TT24 50-59 years, male 50.4
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 49.6
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 49.4
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 49.1
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 48.7
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 48.2
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 47.2
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 46.4
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 45.5
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 45.2
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 45.1
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 44.1
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 43.2
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 42.9
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 42.7
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 42.1
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 42.0
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 40.6
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 40.4
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 39.9
GTEX-1B932-0626-SM-731EM 40-49 years, female 39.7
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 39.6
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 38.3
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 37.3
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 35.9
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 35.5
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 31.1
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 29.5
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 28.7
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 27.1
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 15.7
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 10.3
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

44.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 44.4
FF:10199-103F1 23 years, male 44.4
Salivary gland
Scaled Tags Per Million: 26.9
FF:10093-102C3 16-60 years, mixed 26.9
Submaxillary gland
Scaled Tags Per Million: 31.0
FF:10202-103F4 24 years, male 31.0

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