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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:146.2 nTPM
HPA Brain:380.4 nTPM
GTEx:146.2 nTPM
FANTOM5:301.0 Scaled Tags Per Million
Pig:219.2 nTPM
Mouse:371.1 nTPM
Allen mouse:21.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008160
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

380.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 294.3
2846 Female, age 79, unknown 450.0
2290 Female, age 72, unknown 395.8
1857 Female, age 85, left hemisphere 341.8
1781 Male, age 74, unknown 274.1
1854 Male, age 80, left hemisphere 273.9
2288 Male, age 75, left hemisphere 242.8
2289 Male, age 61, right hemisphere 228.4
2481 Female, age 94, left hemisphere 147.4
Globus pallidus, externus
nTPM: 30.3
2646 Male, age 61, right hemisphere 68.5
2395 Male, age 75, both hemispheres 31.1
2772 Female, age 79, unknown 20.3
2567 Female, age 72, unknown 19.1
1996 Male, age 80, right hemisphere 12.4
Globus pallidus, internus
nTPM: 19.7
2483 Female, age 94, right hemisphere 78.8
2566 Female, age 72, unknown 14.4
2287 Male, age 75, right hemisphere 10.5
1818 Male, age 74, unknown 8.8
2111 Female, age 85, right hemisphere 8.6
2037 Male, age 80, right hemisphere 8.5
2778 Female, age 91, both hemispheres 8.5
Nucleus accumbens
nTPM: 209.0
1783 Male, age 74, unknown 379.3
1856 Female, age 91, right hemisphere 293.3
1806 Female, age 85, left hemisphere 260.0
2698 Female, age 72, unknown 204.5
2824 Male, age 61, right hemisphere 184.1
2286 Male, age 75, left hemisphere 183.9
2391 Female, age 94, left hemisphere 107.2
2732 Male, age 80, right hemisphere 60.0
Nucleus basalis of Meynert
nTPM: 217.9
2484 Female, age 94, left hemisphere 294.1
2393 Male, age 80, right hemisphere 283.4
2821 Male, age 75, both hemispheres 183.2
2569 Male, age 61, both hemispheres 110.8
Nucleus of the diagonal band
nTPM: 126.0
1812 Female, age 91, both hemispheres 151.7
2029 Male, age 61, right hemisphere 151.5
2775 Male, age 80, right hemisphere 133.4
2195 Female, age 85, both hemispheres 117.8
1979 Male, age 74, unknown 75.5
Putamen
nTPM: 380.4
2466 Female, age 79, unknown 523.7
1829 Male, age 74, unknown 513.1
2489 Female, age 72, unknown 449.1
1838 Male, age 80, right hemisphere 367.5
1937 Female, age 91, right hemisphere 308.3
2647 Male, age 75, left hemisphere 299.6
2482 Female, age 94, left hemisphere 201.2
Septal nuclei
nTPM: 105.3
2031 Female, age 72, unknown 178.0
1960 Male, age 74, unknown 135.3
2009 Female, age 91, both hemispheres 126.6
2629 Female, age 94, right hemisphere 109.4
2059 Female, age 85, both hemispheres 91.8
2199 Male, age 80, right hemisphere 51.0
2394 Male, age 61, left hemisphere 44.9
Stria terminalis, bed nucleus
nTPM: 125.1
1974 Female, age 91, both hemispheres 167.2
2486 Female, age 94, both hemispheres 154.8
2201 Male, age 74, unknown 53.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

146.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 137.2
Samples: 246

Max nTPM: 369.6
Min nTPM: 2.0
Std nTPM: 91.3
Median nTPM: 127.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 369.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 358.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 356.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 344.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 338.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 337.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 317.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 316.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 311.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 306.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 304.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 303.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 303.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 301.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 298.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 295.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 295.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 293.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 291.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 287.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 286.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 282.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 281.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 280.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 278.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 275.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 274.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 271.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 267.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 264.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 263.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 263.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 259.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 252.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 252.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 248.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 243.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 238.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 235.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 233.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 233.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 232.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 232.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 231.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 229.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 229.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 226.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 224.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 223.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 221.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 220.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 220.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 217.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 212.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 210.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 209.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 206.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 206.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 205.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 204.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 203.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 202.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 201.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 200.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 194.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 194.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 193.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 193.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 192.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 188.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 187.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 185.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 185.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 184.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 183.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 182.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 181.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 179.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 178.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 176.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 175.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 173.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 171.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 170.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 168.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 168.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 165.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 164.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 164.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 162.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 161.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 160.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 158.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 157.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 156.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 156.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 153.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 153.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 152.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 152.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 150.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 149.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 147.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 147.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 146.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 146.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 145.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 145.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 144.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 142.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 141.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 141.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 138.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 133.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 133.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 133.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 131.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 130.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 129.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 129.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 129.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 128.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 127.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 126.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 126.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 126.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 124.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 122.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 122.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 121.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 121.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 115.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 115.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 114.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 114.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 113.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 113.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 109.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 109.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 106.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 105.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 104.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 102.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 101.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 100.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 99.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 99.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 97.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 96.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 96.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 96.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 94.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 94.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 94.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 94.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 93.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 89.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 89.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 88.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 84.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 81.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 81.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 81.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 79.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 79.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 78.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 78.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 76.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 75.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 75.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 71.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 71.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 71.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 66.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 66.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 65.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 60.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 54.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 54.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 51.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 50.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 50.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 46.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 44.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 43.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 43.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 41.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 40.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 40.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 39.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 39.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 39.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 39.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 36.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 36.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 34.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 34.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 30.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 30.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 29.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 29.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 27.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 27.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 27.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 26.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 25.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 24.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 22.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 22.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 22.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 22.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 20.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 20.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 19.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 19.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 18.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 17.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 16.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 13.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 11.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 10.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 8.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 116.3
Samples: 246

Max nTPM: 333.7
Min nTPM: 2.7
Std nTPM: 71.8
Median nTPM: 115.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 333.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 326.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 308.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 295.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 271.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 270.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 267.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 263.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 262.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 256.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 252.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 248.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 239.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 232.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 228.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 227.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 220.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 211.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 210.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 208.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 207.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 207.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 206.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 204.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 204.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 203.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 202.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 202.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 201.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 201.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 201.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 200.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 198.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 196.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 194.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 190.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 190.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 187.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 185.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 184.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 184.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 183.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 183.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 181.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 181.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 181.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 179.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 179.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 179.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 177.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 177.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 175.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 173.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 172.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 171.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 171.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 170.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 170.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 169.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 168.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 166.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 165.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 164.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 164.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 164.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 163.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 163.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 163.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 163.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 163.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 161.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 160.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 159.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 158.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 156.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 155.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 155.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 154.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 153.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 153.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 149.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 149.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 148.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 147.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 147.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 145.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 144.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 144.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 143.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 142.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 142.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 142.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 141.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 138.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 138.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 137.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 137.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 136.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 135.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 134.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 134.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 134.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 133.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 132.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 131.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 131.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 130.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 129.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 129.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 129.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 127.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 127.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 126.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 125.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 124.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 123.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 123.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 123.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 122.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 119.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 118.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 117.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 115.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 114.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 114.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 113.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 112.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 111.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 108.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 108.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 108.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 106.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 104.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 104.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 103.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 102.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 101.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 101.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 101.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 100.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 100.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 98.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 98.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 98.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 98.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 97.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 96.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 96.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 95.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 92.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 92.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 92.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 91.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 89.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 89.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 88.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 87.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 87.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 86.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 86.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 83.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 83.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 82.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 81.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 80.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 79.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 79.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 77.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 76.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 73.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 71.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 71.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 69.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 68.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 68.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 66.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 65.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 65.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 62.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 61.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 58.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 55.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 55.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 54.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 54.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 53.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 52.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 48.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 48.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 46.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 44.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 44.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 44.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 43.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 42.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 40.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 40.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 38.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 35.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 33.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 32.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 31.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 30.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 28.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 28.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 28.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 27.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 27.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 27.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 25.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 25.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 23.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 21.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 21.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 21.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 20.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 18.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 16.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 16.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 14.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 14.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 14.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 14.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 13.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 12.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 12.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 11.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 11.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 9.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 7.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 6.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 4.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 4.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 3.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.7
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Brain - Putamen (basal ganglia)
Average nTPM: 146.2
Samples: 205

Max nTPM: 486.3
Min nTPM: 5.4
Std nTPM: 101.0
Median nTPM: 129.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 486.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 407.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 395.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 382.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 346.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 344.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 339.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 338.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 332.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 326.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 322.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 321.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 314.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 314.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 314.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 313.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 311.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 301.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 295.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 288.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 288.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 284.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 280.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 278.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 277.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 276.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 272.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 268.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 266.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 263.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 260.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 256.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 256.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 254.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 253.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 253.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 253.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 252.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 249.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 247.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 246.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 244.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 243.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 241.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 240.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 240.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 236.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 235.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 234.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 232.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 229.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 219.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 218.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 214.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 207.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 205.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 199.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 198.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 197.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 197.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 196.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 190.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 189.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 188.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 186.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 185.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 183.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 180.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 180.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 180.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 180.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 179.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 177.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 175.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 168.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 168.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 167.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 166.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 166.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 165.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 163.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 162.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 161.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 160.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 159.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 159.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 153.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 152.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 152.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 151.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 150.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 150.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 150.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 143.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 143.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 143.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 141.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 140.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 140.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 139.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 136.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 135.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 129.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 128.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 127.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 121.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 121.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 120.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 120.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 119.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 119.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 117.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 116.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 116.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 116.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 115.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 114.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 113.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 113.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 112.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 112.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 111.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 111.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 108.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 107.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 106.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 104.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 100.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 100.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 100.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 99.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 95.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 95.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 94.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 91.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 90.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 90.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 90.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 88.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 88.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 83.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 80.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 79.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 78.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 77.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 75.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 75.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 73.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 71.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 60.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 56.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 53.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 52.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 49.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 48.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 48.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 47.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 46.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 46.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 44.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 44.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 42.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 40.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 40.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 39.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 38.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 36.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 34.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 34.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 32.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 31.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 30.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 28.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 28.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 27.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 25.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 24.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 24.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 23.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 23.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 22.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 22.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 21.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 20.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 19.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 19.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 19.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 18.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 15.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 15.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 13.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 13.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 12.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 5.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

301.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 259.7
FF:10164-103B2 76 years, female 259.7
Nucleus accumbens
Scaled Tags Per Million: 230.1
FF:10037-101F1 23-56 years, mixed 230.1
Putamen
Scaled Tags Per Million: 301.0
FF:10176-103C5 60 years, female 301.0
Globus pallidus
Scaled Tags Per Million: 81.4
FF:10175-103C4 60 years, female 113.7
FF:10161-103A8 76 years, female 49.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.2
Pig sample Sample description nTPM
Caudate
nTPM: 208.7
Samples: 4

Max nTPM: 274.0
Min nTPM: 136.7
Sample A Female 136.7
Sample B Female 206.0
Sample C Male 274.0
Sample D Male 218.1
Putamen
nTPM: 219.2
Samples: 4

Max nTPM: 348.6
Min nTPM: 55.3
Sample A Female 55.3
Sample B Female 226.7
Sample C Male 348.6
Sample D Male 246.0
Septum
nTPM: 63.9
Samples: 4

Max nTPM: 110.8
Min nTPM: 22.1
Sample A Female 91.1
Sample B Female 110.8
Sample C Male 22.1
Sample D Male 31.5
Ventral pallidum
nTPM: 115.3
Samples: 4

Max nTPM: 159.0
Min nTPM: 47.5
Sample A Female 140.8
Sample B Female 159.0
Sample C Male 47.5
Sample D Male 114.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

371.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 371.1
Samples: 4

Max nTPM: 447.0
Min nTPM: 314.6
Sample A Male 390.2
Sample B Male 447.0
Sample C Female 314.6
Sample D Female 332.5
Septum
nTPM: 108.5
Samples: 4

Max nTPM: 116.8
Min nTPM: 95.0
Sample A Male 114.1
Sample B Male 116.8
Sample C Female 95.0
Sample D Female 108.1
Ventral forebrain
nTPM: 240.7
Samples: 4

Max nTPM: 252.3
Min nTPM: 230.2
Sample A Male 244.9
Sample B Male 230.2
Sample C Female 252.3
Sample D Female 235.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 21.9
72129292 Antisense, RP_051017_03_F08, Mouse strain C57BL/6J (56 days, male) 24.7
72119591 Antisense, RP_051017_04_A06, Mouse strain C57BL/6J (56 days, male) 21.3
69170330 Antisense, RP_050329_01_B08, Mouse strain C57BL/6J (56 days, male) 21.1
69201582 Antisense, RP_050317_03_B11, Mouse strain C57BL/6J (56 days, male) 20.5
Pallidum
Expression energy: 8.1
69201582 Antisense, RP_050317_03_B11, Mouse strain C57BL/6J (56 days, male) 9.8
72129292 Antisense, RP_051017_03_F08, Mouse strain C57BL/6J (56 days, male) 9.8
69170330 Antisense, RP_050329_01_B08, Mouse strain C57BL/6J (56 days, male) 8.2
72119591 Antisense, RP_051017_04_A06, Mouse strain C57BL/6J (56 days, male) 4.7

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