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ELOVL1
HPA
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  • ELOVL1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ELOVL1
Synonyms Ssc1
Gene descriptioni

Full gene name according to HGNC.

ELOVL fatty acid elongase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p34.2
Chromosome location (bp) 43363398 - 43368074
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000066322 (version 109)
Entrez gene 64834
HGNC HGNC:14418
UniProt Q9BW60 (UniProt - Evidence at protein level)
neXtProt NX_Q9BW60
GeneCards ELOVL1
Antibodypedia ELOVL1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle 1, 2. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that exhibits activity toward saturated and monounsaturated acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. May participate in the production of both saturated and monounsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis 3. Indirectly inhibits RPE65 via production of VLCFAs.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Fatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables fatty acid elongase activity. Involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ELOVL1-201
ENSP00000361536
ENST00000372458
Q9BW60
[Direct mapping] Elongation of very long chain fatty acids protein 1
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006636 [unsaturated fatty acid biosynthetic process]
GO:0009922 [fatty acid elongase activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016740 [transferase activity]
GO:0019367 [fatty acid elongation, saturated fatty acid]
GO:0030148 [sphingolipid biosynthetic process]
GO:0030497 [fatty acid elongation]
GO:0034625 [fatty acid elongation, monounsaturated fatty acid]
GO:0034626 [fatty acid elongation, polyunsaturated fatty acid]
GO:0035338 [long-chain fatty-acyl-CoA biosynthetic process]
GO:0036109 [alpha-linolenic acid metabolic process]
GO:0042761 [very long-chain fatty acid biosynthetic process]
GO:0043651 [linoleic acid metabolic process]
GO:0046513 [ceramide biosynthetic process]
GO:0061436 [establishment of skin barrier]
GO:0102336 [3-oxo-arachidoyl-CoA synthase activity]
GO:0102337 [3-oxo-cerotoyl-CoA synthase activity]
GO:0102338 [3-oxo-lignoceronyl-CoA synthase activity]
GO:0102756 [very-long-chain 3-ketoacyl-CoA synthase activity]
Show all
279 aa
32.7 kDa
No 7
ELOVL1-202
ENSP00000416024
ENST00000413844
Q9BW60
[Direct mapping] Elongation of very long chain fatty acids protein 1
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006636 [unsaturated fatty acid biosynthetic process]
GO:0009922 [fatty acid elongase activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016740 [transferase activity]
GO:0019367 [fatty acid elongation, saturated fatty acid]
GO:0030148 [sphingolipid biosynthetic process]
GO:0030497 [fatty acid elongation]
GO:0034625 [fatty acid elongation, monounsaturated fatty acid]
GO:0034626 [fatty acid elongation, polyunsaturated fatty acid]
GO:0035338 [long-chain fatty-acyl-CoA biosynthetic process]
GO:0036109 [alpha-linolenic acid metabolic process]
GO:0042761 [very long-chain fatty acid biosynthetic process]
GO:0043651 [linoleic acid metabolic process]
GO:0102336 [3-oxo-arachidoyl-CoA synthase activity]
GO:0102337 [3-oxo-cerotoyl-CoA synthase activity]
GO:0102338 [3-oxo-lignoceronyl-CoA synthase activity]
GO:0102756 [very-long-chain 3-ketoacyl-CoA synthase activity]
Show all
252 aa
29.5 kDa
No 6
ELOVL1-216
ENSP00000477602
ENST00000621943
Q9BW60
[Direct mapping] Elongation of very long chain fatty acids protein 1
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006636 [unsaturated fatty acid biosynthetic process]
GO:0009922 [fatty acid elongase activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016740 [transferase activity]
GO:0019367 [fatty acid elongation, saturated fatty acid]
GO:0030148 [sphingolipid biosynthetic process]
GO:0030497 [fatty acid elongation]
GO:0034625 [fatty acid elongation, monounsaturated fatty acid]
GO:0034626 [fatty acid elongation, polyunsaturated fatty acid]
GO:0035338 [long-chain fatty-acyl-CoA biosynthetic process]
GO:0036109 [alpha-linolenic acid metabolic process]
GO:0042761 [very long-chain fatty acid biosynthetic process]
GO:0043651 [linoleic acid metabolic process]
GO:0102336 [3-oxo-arachidoyl-CoA synthase activity]
GO:0102337 [3-oxo-cerotoyl-CoA synthase activity]
GO:0102338 [3-oxo-lignoceronyl-CoA synthase activity]
GO:0102756 [very-long-chain 3-ketoacyl-CoA synthase activity]
Show all
279 aa
32.7 kDa
No 7

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