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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:16.3 nTPM
HPA Brain:79.7 nTPM
GTEx:16.3 nTPM
FANTOM5:58.2 Scaled Tags Per Million
Pig:47.4 nTPM
Mouse:42.0 nTPM
Allen mouse:4.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA049105Antibody CAB033137
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 77.8
2289 Male, age 61, right hemisphere 109.2
1854 Male, age 80, left hemisphere 101.4
2290 Female, age 72, unknown 88.3
2846 Female, age 79, unknown 84.8
1857 Female, age 85, left hemisphere 83.2
2288 Male, age 75, left hemisphere 65.5
1781 Male, age 74, unknown 49.3
2481 Female, age 94, left hemisphere 41.1
Globus pallidus, externus
nTPM: 32.2
2646 Male, age 61, right hemisphere 44.1
2395 Male, age 75, both hemispheres 36.0
2567 Female, age 72, unknown 32.8
2772 Female, age 79, unknown 27.2
1996 Male, age 80, right hemisphere 21.2
Globus pallidus, internus
nTPM: 34.3
2111 Female, age 85, right hemisphere 45.0
2778 Female, age 91, both hemispheres 42.4
2483 Female, age 94, right hemisphere 35.0
2287 Male, age 75, right hemisphere 34.4
2566 Female, age 72, unknown 30.1
1818 Male, age 74, unknown 29.3
2037 Male, age 80, right hemisphere 23.7
Nucleus accumbens
nTPM: 63.7
2824 Male, age 61, right hemisphere 115.5
1806 Female, age 85, left hemisphere 75.3
2286 Male, age 75, left hemisphere 64.2
1783 Male, age 74, unknown 63.8
1856 Female, age 91, right hemisphere 61.5
2698 Female, age 72, unknown 50.1
2391 Female, age 94, left hemisphere 43.7
2732 Male, age 80, right hemisphere 35.3
Nucleus basalis of Meynert
nTPM: 63.6
2393 Male, age 80, right hemisphere 95.9
2484 Female, age 94, left hemisphere 74.1
2821 Male, age 75, both hemispheres 49.2
2569 Male, age 61, both hemispheres 35.4
Nucleus of the diagonal band
nTPM: 29.7
2029 Male, age 61, right hemisphere 37.6
2775 Male, age 80, right hemisphere 30.1
2195 Female, age 85, both hemispheres 29.8
1812 Female, age 91, both hemispheres 26.2
1979 Male, age 74, unknown 24.6
Putamen
nTPM: 79.7
2466 Female, age 79, unknown 117.0
1838 Male, age 80, right hemisphere 107.7
1829 Male, age 74, unknown 89.9
1937 Female, age 91, right hemisphere 79.8
2489 Female, age 72, unknown 69.6
2647 Male, age 75, left hemisphere 51.9
2482 Female, age 94, left hemisphere 41.8
Septal nuclei
nTPM: 28.7
1960 Male, age 74, unknown 38.5
2059 Female, age 85, both hemispheres 33.4
2394 Male, age 61, left hemisphere 32.5
2009 Female, age 91, both hemispheres 27.2
2031 Female, age 72, unknown 26.5
2629 Female, age 94, right hemisphere 21.6
2199 Male, age 80, right hemisphere 21.3
Stria terminalis, bed nucleus
nTPM: 32.6
2486 Female, age 94, both hemispheres 43.2
1974 Female, age 91, both hemispheres 32.2
2201 Male, age 74, unknown 22.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 16.3
Samples: 246

Max nTPM: 42.2
Min nTPM: 4.5
Std nTPM: 7.5
Median nTPM: 14.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 36.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 34.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 34.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 33.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 33.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 33.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 32.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 31.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 30.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 30.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 29.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 29.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 29.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 29.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 29.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 29.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 28.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 28.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 28.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 28.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 27.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 27.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 27.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 27.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 27.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 27.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 27.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 26.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 26.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 25.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 25.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 25.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 25.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 24.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 24.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 24.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 24.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 24.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 24.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 23.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 23.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 23.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 23.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 23.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 23.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 23.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 22.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 22.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 22.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 22.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 22.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 22.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 21.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 21.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 21.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 21.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 21.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 21.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 20.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 20.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 20.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 20.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 20.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 20.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 20.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 20.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 20.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 20.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 19.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 19.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 19.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 19.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 19.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 19.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 19.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 19.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 19.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 18.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 18.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 18.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 18.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 18.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 18.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 18.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 18.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 18.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 18.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 18.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 17.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 17.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 17.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 17.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 17.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 17.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 17.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 17.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 17.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 17.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 16.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 16.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 16.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 16.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 16.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 16.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 16.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 16.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 15.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 15.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 15.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 15.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 15.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 15.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 15.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 15.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 15.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 14.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 14.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 14.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 14.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 14.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 14.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 14.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 14.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 14.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 14.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 14.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 13.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 13.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 13.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 13.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 13.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 13.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 13.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 13.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 13.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 13.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 13.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 13.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 13.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 12.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 12.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 12.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 12.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 12.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 12.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 12.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 12.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 12.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 12.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 12.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 12.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 12.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 12.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 12.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 11.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 11.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 11.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 11.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 11.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 11.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 11.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 11.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 10.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 10.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 10.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 10.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 10.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 10.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 10.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 10.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 10.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 10.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 9.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 9.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 9.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 9.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 9.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 9.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 9.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 9.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 9.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 9.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 9.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 9.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 9.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 9.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 9.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 9.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 8.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 8.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 8.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 8.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 8.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 8.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 8.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 8.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 8.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 8.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 8.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 8.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 8.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 8.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 8.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 8.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 7.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 7.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 7.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 7.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 7.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 7.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 6.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 6.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 6.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 6.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 6.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 6.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 6.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 5.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 5.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 4.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 14.2
Samples: 246

Max nTPM: 34.2
Min nTPM: 2.6
Std nTPM: 6.1
Median nTPM: 13.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 34.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 31.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 28.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 28.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 28.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 27.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 27.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 27.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 26.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 26.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 25.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 25.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 24.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 24.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 23.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 23.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 23.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 23.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 23.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 23.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 23.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 22.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 22.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 22.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 22.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 22.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 22.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 22.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 22.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 21.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 21.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 21.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 21.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 21.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 20.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 20.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 20.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 20.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 20.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 20.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 20.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 20.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 20.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 20.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 20.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 19.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 19.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 19.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 19.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 19.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 19.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 19.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 19.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 19.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 19.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 19.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 19.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 18.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 18.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 18.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 18.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 18.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 18.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 18.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 18.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 18.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 17.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 17.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 17.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 17.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 17.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 17.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 17.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 17.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 17.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 17.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 16.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 16.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 16.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 16.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 16.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 16.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 16.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 16.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 16.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 16.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 16.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 15.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 15.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 15.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 15.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 15.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 15.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 15.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 15.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 15.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 15.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 15.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 15.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 15.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 15.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 15.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 15.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 15.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 15.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 14.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 14.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 14.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 14.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 14.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 14.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 14.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 14.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 14.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 14.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 14.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 14.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 14.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 13.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 13.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 13.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 13.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 13.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 13.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 13.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 13.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 13.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 13.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 13.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 12.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 12.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 12.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 12.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 12.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 12.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 12.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 12.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 12.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 12.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 12.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 12.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 12.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 11.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 11.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 11.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 11.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 11.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 11.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 11.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 11.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 11.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 10.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 10.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 10.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 10.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 10.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 10.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 10.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 10.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 10.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 10.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 10.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 10.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 10.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 10.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 10.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 10.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 10.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 10.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 10.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 9.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 9.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 9.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 9.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 9.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 9.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 9.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 9.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 9.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 9.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 9.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 9.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 9.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 9.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 8.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 8.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 8.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 8.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 8.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 8.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 8.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 8.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 8.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 8.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 8.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 8.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 8.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 8.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 8.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 7.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 7.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 7.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 7.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 7.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 7.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 7.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 7.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 7.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 7.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 7.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 7.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 6.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 6.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 6.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 6.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 6.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 6.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 6.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 6.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 5.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 5.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 5.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 5.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 5.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 5.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 5.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 4.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 4.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 4.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 4.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 4.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 2.6
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Brain - Putamen (basal ganglia)
Average nTPM: 13.9
Samples: 205

Max nTPM: 32.6
Min nTPM: 3.3
Std nTPM: 6.2
Median nTPM: 12.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 32.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 29.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 28.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 26.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 26.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 26.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 26.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 26.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 26.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 26.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 25.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 25.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 24.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 24.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 23.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 23.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 23.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 23.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 23.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 23.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 23.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 23.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 22.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 22.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 22.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 22.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 22.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 22.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 22.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 22.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 22.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 21.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 21.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 21.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 21.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 20.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 20.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 20.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 20.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 20.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 19.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 19.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 19.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 19.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 19.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 18.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 18.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 18.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 18.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 17.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 17.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 17.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 17.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 17.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 17.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 17.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 17.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 17.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 17.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 16.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 16.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 16.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 16.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 16.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 16.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 16.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 16.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 15.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 15.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 15.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 15.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 15.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 15.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 15.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 15.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 15.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 15.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 15.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 14.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 14.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 14.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 14.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 14.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 14.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 14.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 14.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 14.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 14.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 14.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 13.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 13.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 13.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 13.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 13.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 13.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 13.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 12.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 12.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 12.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 12.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 12.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 12.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 12.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 12.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 12.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 11.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 11.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 11.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 11.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 11.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 11.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 11.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 11.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 11.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 11.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 11.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 11.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 10.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 10.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 10.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 10.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 10.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 10.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 10.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 9.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 9.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 9.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 9.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 9.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 9.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 9.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 9.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 9.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 8.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 8.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 8.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 8.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 8.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 8.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 8.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 8.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 8.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 7.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 7.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 7.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 7.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 7.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 7.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 7.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 6.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 6.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 6.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 6.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 6.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 6.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 6.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 5.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 5.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 5.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 5.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 4.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 4.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 58.2
FF:10164-103B2 76 years, female 58.2
Nucleus accumbens
Scaled Tags Per Million: 52.7
FF:10037-101F1 23-56 years, mixed 52.7
Putamen
Scaled Tags Per Million: 54.5
FF:10176-103C5 60 years, female 54.5
Globus pallidus
Scaled Tags Per Million: 57.7
FF:10175-103C4 60 years, female 79.2
FF:10161-103A8 76 years, female 36.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.4
Pig sample Sample description nTPM
Caudate
nTPM: 32.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 23.1
Sample A Female 23.1
Sample B Female 31.3
Sample C Male 36.4
Sample D Male 37.8
Putamen
nTPM: 47.4
Samples: 4

Max nTPM: 61.4
Min nTPM: 35.2
Sample A Female 35.2
Sample B Female 44.6
Sample C Male 61.4
Sample D Male 48.2
Septum
nTPM: 16.8
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.7
Sample A Female 19.9
Sample B Female 18.7
Sample C Male 14.9
Sample D Male 13.7
Ventral pallidum
nTPM: 27.2
Samples: 4

Max nTPM: 32.7
Min nTPM: 23.0
Sample A Female 24.9
Sample B Female 23.0
Sample C Male 28.3
Sample D Male 32.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 42.0
Samples: 4

Max nTPM: 45.2
Min nTPM: 37.2
Sample A Male 44.7
Sample B Male 45.2
Sample C Female 40.8
Sample D Female 37.2
Septum
nTPM: 23.2
Samples: 4

Max nTPM: 26.2
Min nTPM: 21.6
Sample A Male 21.6
Sample B Male 21.8
Sample C Female 23.3
Sample D Female 26.2
Ventral forebrain
nTPM: 25.2
Samples: 4

Max nTPM: 28.5
Min nTPM: 21.1
Sample A Male 25.7
Sample B Male 25.3
Sample C Female 21.1
Sample D Female 28.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.3
73992948 Antisense, RP_051214_03_D12, Mouse strain C57BL/6J (56 days, male) 5.9
69672019 Antisense, RP_050428_02_H01, Mouse strain C57BL/6J (56 days, male) 2.7
Pallidum
Expression energy: 2.2
73992948 Antisense, RP_051214_03_D12, Mouse strain C57BL/6J (56 days, male) 2.5
69672019 Antisense, RP_050428_02_H01, Mouse strain C57BL/6J (56 days, male) 1.8

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