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ACSM2B
HPA
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  • ACSM2B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ACSM2B
Synonyms ACSM2, HXMA, HYST1046
Gene descriptioni

Full gene name according to HGNC.

Acyl-CoA synthetase medium chain family member 2B
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p12.3
Chromosome location (bp) 20536226 - 20576427
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000066813 (version 109)
Entrez gene 348158
HGNC HGNC:30931
UniProt Q68CK6 (UniProt - Evidence at protein level)
neXtProt NX_Q68CK6
GeneCards ACSM2B
Antibodypedia ACSM2B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the activation of fatty acids by CoA to produce an acyl-CoA, the first step in fatty acid metabolism 1, 2. Capable of activating medium-chain fatty acids (e.g. butyric (C4) to decanoic (C10) acids), and certain carboxylate-containing xenobiotics, e.g. benzoate 3, 4.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ligase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Fatty acid metabolism, Lipid metabolism
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Magnesium, Metal-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables benzoate-CoA ligase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid biosynthetic process. Located in mitochondrion. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ACSM2B-201
ENSP00000327453
ENST00000329697
Q68CK6
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004321 [fatty-acyl-CoA synthase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006637 [acyl-CoA metabolic process]
GO:0006805 [xenobiotic metabolic process]
GO:0015645 [fatty acid ligase activity]
GO:0016405 [CoA-ligase activity]
GO:0016874 [ligase activity]
GO:0018858 [benzoate-CoA ligase activity]
GO:0031956 [medium-chain fatty acid-CoA ligase activity]
GO:0046872 [metal ion binding]
GO:0047760 [butyrate-CoA ligase activity]
GO:0102391 [decanoate-CoA ligase activity]
Show all
577 aa
64.3 kDa
No 2
ACSM2B-202
ENSP00000390378
ENST00000414188
Q68CK6
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004321 [fatty-acyl-CoA synthase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006637 [acyl-CoA metabolic process]
GO:0006805 [xenobiotic metabolic process]
GO:0015645 [fatty acid ligase activity]
GO:0016405 [CoA-ligase activity]
GO:0016874 [ligase activity]
GO:0018858 [benzoate-CoA ligase activity]
GO:0031956 [medium-chain fatty acid-CoA ligase activity]
GO:0046872 [metal ion binding]
GO:0047760 [butyrate-CoA ligase activity]
GO:0102391 [decanoate-CoA ligase activity]
Show all
577 aa
64.3 kDa
No 1
ACSM2B-207
ENSP00000454995
ENST00000565232
Q68CK6
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004321 [fatty-acyl-CoA synthase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006637 [acyl-CoA metabolic process]
GO:0006805 [xenobiotic metabolic process]
GO:0015645 [fatty acid ligase activity]
GO:0016405 [CoA-ligase activity]
GO:0016874 [ligase activity]
GO:0018858 [benzoate-CoA ligase activity]
GO:0031956 [medium-chain fatty acid-CoA ligase activity]
GO:0046872 [metal ion binding]
GO:0047760 [butyrate-CoA ligase activity]
GO:0102391 [decanoate-CoA ligase activity]
Show all
577 aa
64.3 kDa
No 2
ACSM2B-208
ENSP00000457377
ENST00000565322
H3BTX9
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006629 [lipid metabolic process]
Show all
498 aa
55.1 kDa
No 2
ACSM2B-209
ENSP00000454247
ENST00000566384
H3BM61
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
118 aa
13.5 kDa
No 0
ACSM2B-211
ENSP00000456378
ENST00000567001
Q68CK6
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004321 [fatty-acyl-CoA synthase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006637 [acyl-CoA metabolic process]
GO:0006805 [xenobiotic metabolic process]
GO:0015645 [fatty acid ligase activity]
GO:0016405 [CoA-ligase activity]
GO:0016874 [ligase activity]
GO:0018858 [benzoate-CoA ligase activity]
GO:0031956 [medium-chain fatty acid-CoA ligase activity]
GO:0046872 [metal ion binding]
GO:0047760 [butyrate-CoA ligase activity]
GO:0102391 [decanoate-CoA ligase activity]
Show all
577 aa
64.3 kDa
No 2
ACSM2B-212
ENSP00000478316
ENST00000567288
A0A087WU25
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
200 aa
21.9 kDa
No 0
ACSM2B-213
ENSP00000455137
ENST00000568098
H3BP39
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
110 aa
12.6 kDa
No 0
ACSM2B-214
ENSP00000455190
ENST00000568882
H3BP79
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016020 [membrane]
Show all
61 aa
6.8 kDa
No 1
ACSM2B-216
ENSP00000456369
ENST00000569163
H3BRR3
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
149 aa
16.5 kDa
No 0
ACSM2B-218
ENSP00000455658
ENST00000569344
H3BQ84
[Direct mapping] Acyl-coenzyme A synthetase ACSM2B, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
105 aa
12.1 kDa
No 0

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