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STAG3
HPA
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  • TISSUE
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • STAG3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

STAG3
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Stromal antigen 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q22.1
Chromosome location (bp) 100177563 - 100221488
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000066923 (version 109)
Entrez gene 10734
HGNC HGNC:11356
UniProt Q9UJ98 (UniProt - Evidence at protein level)
neXtProt NX_Q9UJ98
GeneCards STAG3
Antibodypedia STAG3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Meiosis specific component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The meiosis-specific cohesin complex probably replaces mitosis specific cohesin complex when it dissociates from chromatin during prophase I.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Chromosome partition, Meiosis
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is expressed in the nucleus and is a subunit of the cohesin complex which regulates the cohesion of sister chromatids during cell division. A mutation in this gene is associated with premature ovarian failure. Alternate splicing results in multiple transcript variants encoding distinct isoforms. This gene has multiple pseudogenes. [provided by RefSeq, Apr 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
STAG3-201
ENSP00000319318
ENST00000317296
Q9UJ98
[Direct mapping] Cohesin subunit SA-3
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000785 [chromatin]
GO:0000795 [synaptonemal complex]
GO:0003682 [chromatin binding]
GO:0005615 [extracellular space]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0007062 [sister chromatid cohesion]
GO:0007130 [synaptonemal complex assembly]
GO:0008278 [cohesin complex]
GO:0030893 [meiotic cohesin complex]
GO:0034089 [establishment of meiotic sister chromatid cohesion]
GO:0051321 [meiotic cell cycle]
Show all
1225 aa
139 kDa
No 0
STAG3-202
ENSP00000377586
ENST00000394018
Q9UJ98
[Direct mapping] Cohesin subunit SA-3
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000785 [chromatin]
GO:0000795 [synaptonemal complex]
GO:0003682 [chromatin binding]
GO:0005615 [extracellular space]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0007062 [sister chromatid cohesion]
GO:0007130 [synaptonemal complex assembly]
GO:0008278 [cohesin complex]
GO:0030893 [meiotic cohesin complex]
GO:0034089 [establishment of meiotic sister chromatid cohesion]
GO:0051321 [meiotic cell cycle]
Show all
1167 aa
132.3 kDa
No 0
STAG3-204
ENSP00000409283
ENST00000416412
C9JTG4
[Direct mapping] Cohesin subunit SA-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
Show all
144 aa
15.8 kDa
No 0
STAG3-205
ENSP00000407884
ENST00000422690
C9JYW5
[Direct mapping] Cohesin subunit SA-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
Show all
112 aa
12.2 kDa
No 0
STAG3-206
ENSP00000400359
ENST00000426455
Q9UJ98
[Direct mapping] Cohesin subunit SA-3
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000785 [chromatin]
GO:0000795 [synaptonemal complex]
GO:0003682 [chromatin binding]
GO:0005615 [extracellular space]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0007062 [sister chromatid cohesion]
GO:0007130 [synaptonemal complex assembly]
GO:0008278 [cohesin complex]
GO:0030893 [meiotic cohesin complex]
GO:0034089 [establishment of meiotic sister chromatid cohesion]
GO:0051321 [meiotic cell cycle]
Show all
1225 aa
139 kDa
No 0
STAG3-207
ENSP00000397067
ENST00000439782
C9J3T3
[Direct mapping] Cohesin subunit SA-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
Show all
188 aa
20.6 kDa
No 0
STAG3-218
ENSP00000477973
ENST00000615138
D6W5U7
[Direct mapping] Cohesin subunit SA-3; HCG2024106, isoform CRA_c
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000785 [chromatin]
GO:0000794 [condensed nuclear chromosome]
GO:0000795 [synaptonemal complex]
GO:0000800 [lateral element]
GO:0000802 [transverse filament]
GO:0001673 [male germ cell nucleus]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0007062 [sister chromatid cohesion]
GO:0007129 [homologous chromosome pairing at meiosis]
GO:0008278 [cohesin complex]
GO:0030893 [meiotic cohesin complex]
GO:0034502 [protein localization to chromosome]
GO:0051301 [cell division]
Show all
1226 aa
139.1 kDa
No 0
STAG3-219
ENSP00000484098
ENST00000620100
Q9UJ98
[Direct mapping] Cohesin subunit SA-3
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000785 [chromatin]
GO:0000795 [synaptonemal complex]
GO:0003682 [chromatin binding]
GO:0005615 [extracellular space]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0007062 [sister chromatid cohesion]
GO:0007130 [synaptonemal complex assembly]
GO:0008278 [cohesin complex]
GO:0030893 [meiotic cohesin complex]
GO:0034089 [establishment of meiotic sister chromatid cohesion]
GO:0051321 [meiotic cell cycle]
Show all
1167 aa
132.3 kDa
No 0

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