HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:52.8 nTPM
HPA Brain:43.3 nTPM
GTEx:52.8 nTPM
FANTOM5:54.8 Scaled Tags Per Million
Pig:56.9 nTPM
Mouse:70.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039169
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 43.3
Sample id Sample description nTPM
Hippocampus
nTPM: 36.5
1898 Male, age 80, left hemisphere 44.6
1855 Male, age 76, left hemisphere 44.5
1911 Female, age 85, right hemisphere 37.0
2529 Female, age 94, left hemisphere 34.0
2621 Female, age 67, right hemisphere 30.8
2148 Female, age 91, left hemisphere 28.3
Dentate gyrus
nTPM: 37.2
2010 Male, age 76, both hemispheres 47.6
1927 Female, age 91, both hemispheres 41.8
2530 Female, age 94, left hemisphere 38.6
2528 Male, age 74, both hemispheres 37.2
2246 Female, age 85, both hemispheres 35.1
2531 Female, age 67, both hemispheres 23.0
Entorhinal gyrus
nTPM: 30.4
1938 Female, age 85, left hemisphere 37.3
2686 Male, age 75, right hemisphere 33.0
1787 Male, age 76, left hemisphere 32.1
2764 Male, age 80, right hemisphere 29.5
2117 Female, age 91, right hemisphere 27.7
2613 Female, age 94, left hemisphere 22.7
Hippocampus, CA1
nTPM: 43.3
2749 Male, age 80, left hemisphere 62.5
1873 Female, age 85, both hemispheres 52.4
2045 Male, age 76, both hemispheres 45.7
2527 Male, age 74, both hemispheres 30.5
2082 Female, age 91, right hemisphere 25.4
Hippocampus, CA2
nTPM: 38.6
1892 Male, age 76, both hemispheres 48.7
1963 Male, age 80, left hemisphere 47.0
2249 Male, age 74, both hemispheres 41.5
2437 Female, age 94, left hemisphere 36.1
1940 Female, age 85, left hemisphere 31.4
2113 Female, age 91, right hemisphere 26.6
Hippocampus, CA3
nTPM: 34.2
2137 Male, age 80, left hemisphere 41.4
1891 Female, age 85, both hemispheres 39.0
1867 Male, age 76, both hemispheres 38.7
2436 Male, age 74, both hemispheres 36.7
2620 Female, age 94, left hemisphere 27.1
2861 Female, age 67, both hemispheres 22.2
Parahippocampal cortex
nTPM: 32.2
1933 Female, age 85, both hemispheres 40.6
1850 Male, age 80, both hemispheres 38.0
2693 Female, age 94, both hemispheres 37.0
2532 Female, age 72, left hemisphere 31.7
2622 Female, age 67, right hemisphere 31.4
2250 Female, age 67, right hemisphere 30.9
2692 Male, age 74, both hemispheres 30.8
1990 Female, age 91, right hemisphere 28.9
2245 Female, age 91, both hemispheres 27.9
2018 Male, age 76, both hemispheres 24.5
Perirhinal gyrus
nTPM: 35.3
1841 Female, age 85, right hemisphere 41.5
1847 Female, age 91, left hemisphere 35.4
2521 Female, age 94, right hemisphere 34.6
2848 Male, age 76, right hemisphere 33.2
1794 Male, age 80, right hemisphere 31.8
Subiculum
nTPM: 33.2
1977 Female, age 85, both hemispheres 36.7
1901 Male, age 80, both hemispheres 36.1
2042 Male, age 76, both hemispheres 35.7
2438 Female, age 94, left hemisphere 35.1
2729 Female, age 91, right hemisphere 28.3
2619 Male, age 74, both hemispheres 27.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 52.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.8
Samples: 197

Max nTPM: 156.9
Min nTPM: 22.3
Std nTPM: 17.6
Median nTPM: 49.9
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 156.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 155.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 102.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 101.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 93.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 93.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 81.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 79.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 78.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 77.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 77.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 54.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.8
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 38.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 56.9
Pig sample Sample description nTPM
Subiculum
nTPM: 56.9
Samples: 4

Max nTPM: 64.3
Min nTPM: 50.5
Sample A Female 64.3
Sample B Female 56.1
Sample C Male 50.5
Sample D Male 56.7
Dorsal hippocampus
nTPM: 46.7
Samples: 4

Max nTPM: 58.6
Min nTPM: 38.7
Sample A Female 58.6
Sample B Female 49.9
Sample C Male 38.7
Sample D Male 39.5
Entorhinal cortex
nTPM: 50.2
Samples: 4

Max nTPM: 57.2
Min nTPM: 41.3
Sample A Female 47.9
Sample B Female 57.2
Sample C Male 54.3
Sample D Male 41.3
Ventral hippocampus
nTPM: 48.9
Samples: 4

Max nTPM: 52.8
Min nTPM: 45.3
Sample A Female 48.5
Sample B Female 49.1
Sample C Male 52.8
Sample D Male 45.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 70.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.1
Samples: 4

Max nTPM: 76.0
Min nTPM: 60.9
Sample A Male 76.0
Sample B Male 73.8
Sample C Female 69.6
Sample D Female 60.9
Hippocampal formation
nTPM: 69.9
Samples: 4

Max nTPM: 79.7
Min nTPM: 63.7
Sample A Male 79.7
Sample B Male 63.7
Sample C Female 67.7
Sample D Female 68.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
413789 Antisense, RP_040809_01_D10, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org