HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:24.0 nTPM
HPA Brain:27.6 nTPM
GTEx:24.0 nTPM
FANTOM5:63.6 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:22.7 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024212Antibody HPA024594Antibody HPA024596
Glial cells Not detectedLowNot detected
Neuronal cells MediumMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.6
Sample id Sample description nTPM
Hippocampus
nTPM: 24.3
1898 Male, age 80, left hemisphere 30.1
2529 Female, age 94, left hemisphere 25.7
1911 Female, age 85, right hemisphere 25.5
1855 Male, age 76, left hemisphere 22.2
2621 Female, age 67, right hemisphere 21.9
2148 Female, age 91, left hemisphere 20.7
Dentate gyrus
nTPM: 23.4
2530 Female, age 94, left hemisphere 29.2
2010 Male, age 76, both hemispheres 26.6
1927 Female, age 91, both hemispheres 23.6
2246 Female, age 85, both hemispheres 22.6
2528 Male, age 74, both hemispheres 21.4
2531 Female, age 67, both hemispheres 16.7
Entorhinal gyrus
nTPM: 24.3
1938 Female, age 85, left hemisphere 30.0
2764 Male, age 80, right hemisphere 25.0
1787 Male, age 76, left hemisphere 24.3
2117 Female, age 91, right hemisphere 24.0
2613 Female, age 94, left hemisphere 21.6
2686 Male, age 75, right hemisphere 20.9
Hippocampus, CA1
nTPM: 25.2
2749 Male, age 80, left hemisphere 34.7
1873 Female, age 85, both hemispheres 27.3
2527 Male, age 74, both hemispheres 23.0
2082 Female, age 91, right hemisphere 22.1
2045 Male, age 76, both hemispheres 18.7
Hippocampus, CA2
nTPM: 27.6
1963 Male, age 80, left hemisphere 33.2
1892 Male, age 76, both hemispheres 32.3
2249 Male, age 74, both hemispheres 28.8
1940 Female, age 85, left hemisphere 24.5
2437 Female, age 94, left hemisphere 23.7
2113 Female, age 91, right hemisphere 23.0
Hippocampus, CA3
nTPM: 24.6
2137 Male, age 80, left hemisphere 29.8
1867 Male, age 76, both hemispheres 29.1
2436 Male, age 74, both hemispheres 28.6
1891 Female, age 85, both hemispheres 27.0
2861 Female, age 67, both hemispheres 17.3
2620 Female, age 94, left hemisphere 15.6
Parahippocampal cortex
nTPM: 24.1
1850 Male, age 80, both hemispheres 30.7
1933 Female, age 85, both hemispheres 26.9
1990 Female, age 91, right hemisphere 25.0
2018 Male, age 76, both hemispheres 24.7
2250 Female, age 67, right hemisphere 24.0
2692 Male, age 74, both hemispheres 23.2
2245 Female, age 91, both hemispheres 22.2
2693 Female, age 94, both hemispheres 22.2
2532 Female, age 72, left hemisphere 21.6
2622 Female, age 67, right hemisphere 20.0
Perirhinal gyrus
nTPM: 27.3
1794 Male, age 80, right hemisphere 29.5
1847 Female, age 91, left hemisphere 28.9
1841 Female, age 85, right hemisphere 28.8
2848 Male, age 76, right hemisphere 25.7
2521 Female, age 94, right hemisphere 23.7
Subiculum
nTPM: 25.3
1901 Male, age 80, both hemispheres 30.3
1977 Female, age 85, both hemispheres 26.3
2438 Female, age 94, left hemisphere 24.9
2619 Male, age 74, both hemispheres 24.3
2042 Male, age 76, both hemispheres 23.6
2729 Female, age 91, right hemisphere 22.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.0
Samples: 197

Max nTPM: 51.2
Min nTPM: 11.9
Std nTPM: 6.1
Median nTPM: 22.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 51.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 43.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 37.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 36.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 36.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 36.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 36.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 35.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 35.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 35.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 63.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.6
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 55.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 35.3
Pig sample Sample description nTPM
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 44.4
Min nTPM: 28.1
Sample A Female 44.4
Sample B Female 34.9
Sample C Male 30.6
Sample D Male 28.1
Dorsal hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 40.3
Min nTPM: 28.4
Sample A Female 40.3
Sample B Female 33.8
Sample C Male 34.6
Sample D Male 28.4
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 40.7
Min nTPM: 31.0
Sample A Female 33.7
Sample B Female 40.7
Sample C Male 35.7
Sample D Male 31.0
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 34.7
Min nTPM: 28.9
Sample A Female 30.8
Sample B Female 28.9
Sample C Male 34.7
Sample D Male 31.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.8
Samples: 4

Max nTPM: 23.0
Min nTPM: 20.2
Sample A Male 23.0
Sample B Male 22.6
Sample C Female 21.4
Sample D Female 20.2
Hippocampal formation
nTPM: 22.7
Samples: 4

Max nTPM: 25.0
Min nTPM: 21.3
Sample A Male 25.0
Sample B Male 22.9
Sample C Female 21.7
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
74958491 Antisense, RP_060315_05_B02, Mouse strain C57BL/6J (56 days, male) 1.8
70201636 Antisense, RP_050517_04_H05, Mouse strain C57BL/6J (56 days, male) 0.9

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