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SYT1
HPA
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  • SYT1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SYT1
Synonyms P65, SVP65, SYT
Gene descriptioni

Full gene name according to HGNC.

Synaptotagmin 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q21.2
Chromosome location (bp) 78863993 - 79452008
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

29
Ensembl ENSG00000067715 (version 109)
Entrez gene 6857
HGNC HGNC:11509
UniProt P21579 (UniProt - Evidence at protein level)
neXtProt NX_P21579
GeneCards SYT1
Antibodypedia SYT1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Calcium sensor that participates in triggering neurotransmitter release at the synapse (By similarity). May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse (By similarity). It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone. A Ca(2+)- dependent interaction between synaptotagmin and putative receptors for activated protein kinase C has also been reported. It can bind to at least three additional proteins in a Ca(2+)-independent manner; these are neurexins, syntaxin and AP2. Plays a role in dendrite formation by melanocytes 1.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the synaptotagmin protein family. The synaptotagmins are integral membrane proteins of synaptic vesicles that serve as calcium sensors in the process of vesicular trafficking and exocytosis. The encoded protein participates in triggering neurotransmitter release at the synapse in response to calcium binding. Mutations in this gene are associated with Baker-Gordon syndrome. [provided by RefSeq, Jan 2023]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SYT1-201
ENSP00000261205
ENST00000261205
P21579
[Direct mapping] Synaptotagmin-1
Show all
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000149 [SNARE binding]
GO:0001786 [phosphatidylserine binding]
GO:0005509 [calcium ion binding]
GO:0005513 [detection of calcium ion]
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005543 [phospholipid binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0007268 [chemical synaptic transmission]
GO:0007269 [neurotransmitter secretion]
GO:0007420 [brain development]
GO:0008021 [synaptic vesicle]
GO:0008022 [protein C-terminus binding]
GO:0014059 [regulation of dopamine secretion]
GO:0016020 [membrane]
GO:0016079 [synaptic vesicle exocytosis]
GO:0016192 [vesicle-mediated transport]
GO:0017075 [syntaxin-1 binding]
GO:0017156 [calcium-ion regulated exocytosis]
GO:0017157 [regulation of exocytosis]
GO:0017158 [regulation of calcium ion-dependent exocytosis]
GO:0019905 [syntaxin binding]
GO:0030141 [secretory granule]
GO:0030154 [cell differentiation]
GO:0030276 [clathrin binding]
GO:0030348 [syntaxin-3 binding]
GO:0030424 [axon]
GO:0030658 [transport vesicle membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031045 [dense core granule]
GO:0031340 [positive regulation of vesicle fusion]
GO:0031410 [cytoplasmic vesicle]
GO:0033603 [positive regulation of dopamine secretion]
GO:0042584 [chromaffin granule membrane]
GO:0042734 [presynaptic membrane]
GO:0042802 [identical protein binding]
GO:0043005 [neuron projection]
GO:0043229 [intracellular organelle]
GO:0044306 [neuron projection terminus]
GO:0045202 [synapse]
GO:0045956 [positive regulation of calcium ion-dependent exocytosis]
GO:0046872 [metal ion binding]
GO:0046982 [protein heterodimerization activity]
GO:0048278 [vesicle docking]
GO:0048306 [calcium-dependent protein binding]
GO:0048488 [synaptic vesicle endocytosis]
GO:0048791 [calcium ion-regulated exocytosis of neurotransmitter]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0050806 [positive regulation of synaptic transmission]
GO:0051291 [protein heterooligomerization]
GO:0051592 [response to calcium ion]
GO:0051966 [regulation of synaptic transmission, glutamatergic]
GO:0060076 [excitatory synapse]
GO:0060201 [clathrin-sculpted acetylcholine transport vesicle membrane]
GO:0060203 [clathrin-sculpted glutamate transport vesicle membrane]
GO:0061202 [clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane]
GO:0061669 [spontaneous neurotransmitter secretion]
GO:0061891 [calcium ion sensor activity]
GO:0070083 [clathrin-sculpted monoamine transport vesicle membrane]
GO:0070382 [exocytic vesicle]
GO:0071277 [cellular response to calcium ion]
GO:0071911 [synchronous neurotransmitter secretion]
GO:0098686 [hippocampal mossy fiber to CA3 synapse]
GO:0098746 [fast, calcium ion-dependent exocytosis of neurotransmitter]
GO:0098978 [glutamatergic synapse]
GO:0099502 [calcium-dependent activation of synaptic vesicle fusion]
GO:1903235 [positive regulation of calcium ion-dependent exocytosis of neurotransmitter]
GO:1903305 [regulation of regulated secretory pathway]
GO:1903861 [positive regulation of dendrite extension]
GO:2000300 [regulation of synaptic vesicle exocytosis]
Show all
422 aa
47.6 kDa
No 1
SYT1-202
ENSP00000376932
ENST00000393240
P21579
[Direct mapping] Synaptotagmin-1
Show all
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000149 [SNARE binding]
GO:0001786 [phosphatidylserine binding]
GO:0005509 [calcium ion binding]
GO:0005513 [detection of calcium ion]
GO:0005515 [protein binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0007268 [chemical synaptic transmission]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0014059 [regulation of dopamine secretion]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0017075 [syntaxin-1 binding]
GO:0017156 [calcium-ion regulated exocytosis]
GO:0017157 [regulation of exocytosis]
GO:0017158 [regulation of calcium ion-dependent exocytosis]
GO:0019905 [syntaxin binding]
GO:0030154 [cell differentiation]
GO:0030276 [clathrin binding]
GO:0030424 [axon]
GO:0030658 [transport vesicle membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031045 [dense core granule]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
GO:0048488 [synaptic vesicle endocytosis]
GO:0048791 [calcium ion-regulated exocytosis of neurotransmitter]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0050806 [positive regulation of synaptic transmission]
GO:0051966 [regulation of synaptic transmission, glutamatergic]
GO:0060201 [clathrin-sculpted acetylcholine transport vesicle membrane]
GO:0060203 [clathrin-sculpted glutamate transport vesicle membrane]
GO:0061202 [clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane]
GO:0070083 [clathrin-sculpted monoamine transport vesicle membrane]
GO:0070382 [exocytic vesicle]
GO:0071277 [cellular response to calcium ion]
GO:0098746 [fast, calcium ion-dependent exocytosis of neurotransmitter]
GO:1903235 [positive regulation of calcium ion-dependent exocytosis of neurotransmitter]
GO:1903305 [regulation of regulated secretory pathway]
GO:1903861 [positive regulation of dendrite extension]
Show all
422 aa
47.6 kDa
No 1
SYT1-203
ENSP00000401559
ENST00000446242
C9JX50
[Direct mapping] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
181 aa
19.8 kDa
No 1
SYT1-204
ENSP00000391056
ENST00000457153
J3KQA0
[Direct mapping] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
419 aa
47.3 kDa
No 1
SYT1-205
ENSP00000448964
ENST00000547046
F8VYH8
[Direct mapping] Synaptotagmin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
58 aa
6.2 kDa
No 0
SYT1-208
ENSP00000450321
ENST00000549671
F8VZY3
[Direct mapping] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
72 aa
7.6 kDa
No 1
SYT1-209
ENSP00000447656
ENST00000551304
F8VZY3
[Direct mapping] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
72 aa
7.6 kDa
No 1
SYT1-210
ENSP00000447035
ENST00000552074
F8W1U9
[Direct mapping] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
94 aa
10.2 kDa
No 1
SYT1-211
ENSP00000448861
ENST00000552624
F8VXH0
[Direct mapping] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
173 aa
18.9 kDa
No 1
SYT1-212
ENSP00000447575
ENST00000552744
P21579
[Direct mapping] Synaptotagmin-1
Show all
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000149 [SNARE binding]
GO:0001786 [phosphatidylserine binding]
GO:0005509 [calcium ion binding]
GO:0005513 [detection of calcium ion]
GO:0005515 [protein binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0007268 [chemical synaptic transmission]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0014059 [regulation of dopamine secretion]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0017075 [syntaxin-1 binding]
GO:0017156 [calcium-ion regulated exocytosis]
GO:0017157 [regulation of exocytosis]
GO:0017158 [regulation of calcium ion-dependent exocytosis]
GO:0019905 [syntaxin binding]
GO:0030154 [cell differentiation]
GO:0030276 [clathrin binding]
GO:0030424 [axon]
GO:0030658 [transport vesicle membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031045 [dense core granule]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
GO:0048488 [synaptic vesicle endocytosis]
GO:0048791 [calcium ion-regulated exocytosis of neurotransmitter]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0050806 [positive regulation of synaptic transmission]
GO:0051966 [regulation of synaptic transmission, glutamatergic]
GO:0060201 [clathrin-sculpted acetylcholine transport vesicle membrane]
GO:0060203 [clathrin-sculpted glutamate transport vesicle membrane]
GO:0061202 [clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane]
GO:0070083 [clathrin-sculpted monoamine transport vesicle membrane]
GO:0070382 [exocytic vesicle]
GO:0071277 [cellular response to calcium ion]
GO:0098746 [fast, calcium ion-dependent exocytosis of neurotransmitter]
GO:1903235 [positive regulation of calcium ion-dependent exocytosis of neurotransmitter]
GO:1903305 [regulation of regulated secretory pathway]
GO:1903861 [positive regulation of dendrite extension]
Show all
422 aa
47.6 kDa
No 1
SYT1-213
ENSP00000515993
ENST00000704696
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-215
ENSP00000515995
ENST00000704698
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
Show all
105 aa
12.1 kDa
No 0
SYT1-216
ENSP00000515996
ENST00000704699
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
Show all
419 aa
47.3 kDa
No 1
SYT1-217
ENSP00000515997
ENST00000704700
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-218
ENSP00000515998
ENST00000704701
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
7 aa
0.8 kDa
No 0
SYT1-219
ENSP00000515999
ENST00000704702
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-220
ENSP00000516000
ENST00000704703
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
Show all
367 aa
41.7 kDa
No 0
SYT1-221
ENSP00000516001
ENST00000704704
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-222
ENSP00000516002
ENST00000704705
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-223
ENSP00000516003
ENST00000704706
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-225
ENSP00000516005
ENST00000704708
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-226
ENSP00000516006
ENST00000704709
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
Show all
419 aa
47.3 kDa
No 1
SYT1-227
ENSP00000516007
ENST00000704710
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-228
ENSP00000516008
ENST00000704711
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
Show all
364 aa
41.1 kDa
No 1
SYT1-231
ENSP00000516009
ENST00000704714
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1
SYT1-232
ENSP00000516010
ENST00000704715
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
Show all
209 aa
23.1 kDa
No 1
SYT1-233
ENSP00000516011
ENST00000704716
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
Show all
419 aa
47.3 kDa
No 1
SYT1-234
ENSP00000516012
ENST00000704717
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
7 aa
0.8 kDa
No 0
SYT1-235
ENSP00000516013
ENST00000704718
A0A024RBE9
[Target identity:100%; Query identity:100%] Synaptotagmin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005509 [calcium ion binding]
GO:0005544 [calcium-dependent phospholipid binding]
GO:0007269 [neurotransmitter secretion]
GO:0008021 [synaptic vesicle]
GO:0016020 [membrane]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042584 [chromaffin granule membrane]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
Show all
422 aa
47.6 kDa
No 1

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