HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:66.7 nTPM
HPA Brain:68.0 nTPM
GTEx:66.7 nTPM
FANTOM5:115.4 Scaled Tags Per Million
Pig:69.2 nTPM
Mouse:168.3 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000425Antibody HPA002017
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 68.0
Sample id Sample description nTPM
Hippocampus
nTPM: 54.6
1898 Male, age 80, left hemisphere 65.6
2621 Female, age 67, right hemisphere 59.4
1855 Male, age 76, left hemisphere 56.1
1911 Female, age 85, right hemisphere 51.6
2529 Female, age 94, left hemisphere 51.4
2148 Female, age 91, left hemisphere 43.4
Dentate gyrus
nTPM: 54.9
1927 Female, age 91, both hemispheres 63.1
2530 Female, age 94, left hemisphere 62.4
2010 Male, age 76, both hemispheres 61.7
2528 Male, age 74, both hemispheres 48.3
2246 Female, age 85, both hemispheres 48.1
2531 Female, age 67, both hemispheres 46.0
Entorhinal gyrus
nTPM: 49.0
2764 Male, age 80, right hemisphere 55.2
2613 Female, age 94, left hemisphere 53.8
1787 Male, age 76, left hemisphere 51.2
1938 Female, age 85, left hemisphere 50.4
2117 Female, age 91, right hemisphere 44.4
2686 Male, age 75, right hemisphere 39.1
Hippocampus, CA1
nTPM: 68.0
2749 Male, age 80, left hemisphere 131.9
2527 Male, age 74, both hemispheres 54.5
1873 Female, age 85, both hemispheres 54.1
2045 Male, age 76, both hemispheres 51.9
2082 Female, age 91, right hemisphere 47.4
Hippocampus, CA2
nTPM: 56.1
1892 Male, age 76, both hemispheres 63.9
2437 Female, age 94, left hemisphere 63.9
1963 Male, age 80, left hemisphere 61.3
2249 Male, age 74, both hemispheres 54.6
2113 Female, age 91, right hemisphere 48.0
1940 Female, age 85, left hemisphere 45.0
Hippocampus, CA3
nTPM: 62.0
2137 Male, age 80, left hemisphere 102.6
2436 Male, age 74, both hemispheres 63.5
1867 Male, age 76, both hemispheres 59.2
2620 Female, age 94, left hemisphere 57.5
1891 Female, age 85, both hemispheres 47.4
2861 Female, age 67, both hemispheres 41.8
Parahippocampal cortex
nTPM: 47.1
2245 Female, age 91, both hemispheres 60.3
1850 Male, age 80, both hemispheres 55.3
1990 Female, age 91, right hemisphere 49.5
2018 Male, age 76, both hemispheres 46.5
2250 Female, age 67, right hemisphere 46.0
2693 Female, age 94, both hemispheres 44.3
2692 Male, age 74, both hemispheres 44.0
1933 Female, age 85, both hemispheres 43.1
2532 Female, age 72, left hemisphere 42.4
2622 Female, age 67, right hemisphere 39.1
Perirhinal gyrus
nTPM: 54.7
1794 Male, age 80, right hemisphere 65.4
1847 Female, age 91, left hemisphere 64.2
2848 Male, age 76, right hemisphere 49.0
1841 Female, age 85, right hemisphere 48.9
2521 Female, age 94, right hemisphere 46.0
Subiculum
nTPM: 55.1
1901 Male, age 80, both hemispheres 71.0
2438 Female, age 94, left hemisphere 63.7
2042 Male, age 76, both hemispheres 61.9
1977 Female, age 85, both hemispheres 47.1
2619 Male, age 74, both hemispheres 46.3
2729 Female, age 91, right hemisphere 40.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 66.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.7
Samples: 197

Max nTPM: 162.9
Min nTPM: 18.7
Std nTPM: 24.8
Median nTPM: 61.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 162.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 157.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 143.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 137.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 136.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 131.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 125.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 114.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 112.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 111.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 109.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 115.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.4
FF:10169-103B7 60 years, female 149.5
FF:10153-102I9 76 years, female 81.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 69.2
Pig sample Sample description nTPM
Subiculum
nTPM: 60.3
Samples: 4

Max nTPM: 78.8
Min nTPM: 52.2
Sample A Female 78.8
Sample B Female 55.0
Sample C Male 55.3
Sample D Male 52.2
Dorsal hippocampus
nTPM: 69.2
Samples: 4

Max nTPM: 90.3
Min nTPM: 54.8
Sample A Female 90.3
Sample B Female 63.4
Sample C Male 68.4
Sample D Male 54.8
Entorhinal cortex
nTPM: 58.3
Samples: 4

Max nTPM: 64.2
Min nTPM: 49.5
Sample A Female 64.2
Sample B Female 60.7
Sample C Male 58.8
Sample D Male 49.5
Ventral hippocampus
nTPM: 66.4
Samples: 4

Max nTPM: 78.5
Min nTPM: 46.1
Sample A Female 71.4
Sample B Female 46.1
Sample C Male 78.5
Sample D Male 69.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 168.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.5
Samples: 4

Max nTPM: 166.6
Min nTPM: 152.1
Sample A Male 152.1
Sample B Male 162.1
Sample C Female 166.6
Sample D Female 153.0
Hippocampal formation
nTPM: 168.3
Samples: 4

Max nTPM: 185.8
Min nTPM: 151.1
Sample A Male 185.8
Sample B Male 151.1
Sample C Female 165.0
Sample D Female 171.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
81600144 Antisense, RP_080313_02_E11, Mouse strain C57BL/6J (56 days, male) 14.9
69735216 Antisense, RP_050503_02_C11, Mouse strain C57BL/6J (56 days, male) 13.0

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