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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:155.8 nTPM
HPA Brain:236.6 nTPM
GTEx:155.8 nTPM
FANTOM5:68.7 Scaled Tags Per Million
Pig:41.1 nTPM
Mouse:59.7 nTPM
Allen mouse:0.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB004231
Glial cells Not detected
Neuronal cells Not detected

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 164.2
2481 Female, age 94, left hemisphere 267.2
2290 Female, age 72, unknown 187.1
1857 Female, age 85, left hemisphere 183.1
1854 Male, age 80, left hemisphere 162.1
2289 Male, age 61, right hemisphere 155.7
2288 Male, age 75, left hemisphere 125.2
1781 Male, age 74, unknown 122.4
2846 Female, age 79, unknown 110.8
Globus pallidus, externus
nTPM: 236.6
2646 Male, age 61, right hemisphere 339.4
2567 Female, age 72, unknown 275.9
1996 Male, age 80, right hemisphere 253.5
2772 Female, age 79, unknown 192.7
2395 Male, age 75, both hemispheres 121.6
Globus pallidus, internus
nTPM: 211.0
2483 Female, age 94, right hemisphere 312.1
1818 Male, age 74, unknown 267.3
2037 Male, age 80, right hemisphere 223.6
2566 Female, age 72, unknown 189.1
2111 Female, age 85, right hemisphere 188.3
2287 Male, age 75, right hemisphere 166.7
2778 Female, age 91, both hemispheres 129.8
Nucleus accumbens
nTPM: 157.2
1806 Female, age 85, left hemisphere 185.8
1783 Male, age 74, unknown 176.2
2286 Male, age 75, left hemisphere 172.1
2824 Male, age 61, right hemisphere 162.4
2732 Male, age 80, right hemisphere 160.0
2391 Female, age 94, left hemisphere 137.8
1856 Female, age 91, right hemisphere 131.7
2698 Female, age 72, unknown 131.4
Nucleus basalis of Meynert
nTPM: 178.4
2569 Male, age 61, both hemispheres 363.8
2484 Female, age 94, left hemisphere 160.9
2393 Male, age 80, right hemisphere 102.8
2821 Male, age 75, both hemispheres 86.0
Nucleus of the diagonal band
nTPM: 112.5
1979 Male, age 74, unknown 171.7
2195 Female, age 85, both hemispheres 108.8
2775 Male, age 80, right hemisphere 106.3
1812 Female, age 91, both hemispheres 93.4
2029 Male, age 61, right hemisphere 81.9
Putamen
nTPM: 149.8
2647 Male, age 75, left hemisphere 193.9
2482 Female, age 94, left hemisphere 189.7
2489 Female, age 72, unknown 160.2
1829 Male, age 74, unknown 133.4
2466 Female, age 79, unknown 129.3
1838 Male, age 80, right hemisphere 129.1
1937 Female, age 91, right hemisphere 112.9
Septal nuclei
nTPM: 125.5
2199 Male, age 80, right hemisphere 213.6
2394 Male, age 61, left hemisphere 164.0
2059 Female, age 85, both hemispheres 159.5
1960 Male, age 74, unknown 99.9
2009 Female, age 91, both hemispheres 89.2
2629 Female, age 94, right hemisphere 76.9
2031 Female, age 72, unknown 75.3
Stria terminalis, bed nucleus
nTPM: 122.9
2201 Male, age 74, unknown 184.6
2486 Female, age 94, both hemispheres 99.0
1974 Female, age 91, both hemispheres 85.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 155.8
Samples: 246

Max nTPM: 582.2
Min nTPM: 12.4
Std nTPM: 78.3
Median nTPM: 143.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 582.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 481.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 401.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 372.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 357.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 348.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 342.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 318.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 317.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 312.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 305.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 293.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 291.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 284.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 280.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 279.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 278.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 277.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 277.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 276.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 276.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 267.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 258.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 256.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 255.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 252.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 247.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 241.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 241.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 238.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 234.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 232.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 226.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 225.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 223.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 222.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 221.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 220.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 219.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 218.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 217.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 217.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 216.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 213.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 212.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 209.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 208.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 207.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 206.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 206.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 206.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 205.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 204.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 204.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 204.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 204.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 203.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 202.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 201.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 199.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 198.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 197.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 197.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 196.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 195.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 194.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 192.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 189.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 188.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 188.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 188.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 187.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 184.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 182.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 182.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 180.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 180.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 179.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 178.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 177.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 176.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 175.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 175.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 173.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 172.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 172.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 170.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 170.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 169.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 169.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 168.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 167.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 167.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 165.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 163.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 163.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 160.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 160.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 159.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 159.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 159.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 158.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 157.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 155.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 154.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 154.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 154.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 153.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 153.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 152.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 152.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 150.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 150.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 149.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 146.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 146.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 145.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 145.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 145.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 145.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 145.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 143.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 142.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 141.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 141.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 141.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 140.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 140.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 140.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 139.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 138.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 138.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 137.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 136.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 135.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 135.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 135.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 134.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 134.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 133.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 132.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 129.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 129.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 128.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 128.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 127.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 127.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 126.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 126.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 126.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 126.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 126.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 125.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 125.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 125.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 125.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 123.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 122.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 121.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 120.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 119.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 119.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 118.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 117.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 117.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 116.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 116.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 115.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 115.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 113.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 113.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 112.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 112.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 111.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 111.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 110.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 109.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 109.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 108.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 106.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 104.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 103.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 102.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 101.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 101.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 101.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 100.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 100.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 99.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 98.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 97.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 96.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 96.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 94.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 93.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 92.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 91.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 90.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 90.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 89.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 89.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 88.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 86.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 85.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 85.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 84.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 83.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 83.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 83.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 81.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 80.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 79.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 79.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 76.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 71.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 71.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 68.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 65.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 65.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 64.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 64.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 63.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 62.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 60.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 50.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 47.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 45.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 39.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 38.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 32.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 24.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 19.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 13.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 12.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 145.9
Samples: 246

Max nTPM: 477.5
Min nTPM: 26.8
Std nTPM: 81.0
Median nTPM: 128.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 477.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 466.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 449.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 442.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 404.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 387.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 368.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 354.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 345.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 339.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 336.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 315.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 305.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 305.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 300.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 288.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 286.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 281.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 276.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 271.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 269.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 269.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 269.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 263.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 262.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 259.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 252.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 248.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 240.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 236.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 224.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 222.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 216.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 213.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 213.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 213.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 212.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 212.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 211.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 211.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 210.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 210.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 210.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 207.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 206.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 202.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 201.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 194.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 193.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 186.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 182.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 182.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 182.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 180.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 176.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 175.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 175.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 175.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 174.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 173.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 171.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 171.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 168.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 167.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 166.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 165.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 164.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 164.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 164.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 163.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 163.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 163.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 162.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 162.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 162.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 161.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 161.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 160.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 160.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 158.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 157.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 157.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 153.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 153.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 152.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 151.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 150.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 150.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 149.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 146.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 146.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 146.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 145.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 145.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 144.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 144.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 143.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 142.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 142.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 141.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 141.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 140.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 139.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 138.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 138.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 137.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 137.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 137.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 137.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 136.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 135.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 135.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 135.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 135.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 134.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 134.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 132.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 132.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 131.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 130.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 129.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 129.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 129.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 128.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 127.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 127.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 127.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 126.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 125.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 125.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 123.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 123.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 122.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 120.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 120.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 120.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 119.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 119.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 118.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 118.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 118.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 117.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 117.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 116.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 115.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 115.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 114.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 114.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 114.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 113.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 113.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 112.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 112.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 112.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 111.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 111.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 109.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 109.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 106.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 106.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 106.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 106.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 106.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 106.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 104.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 104.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 103.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 103.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 103.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 102.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 101.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 99.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 99.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 99.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 98.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 98.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 97.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 95.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 95.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 95.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 95.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 94.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 94.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 93.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 93.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 90.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 90.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 89.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 89.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 89.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 89.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 87.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 87.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 85.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 85.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 84.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 84.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 83.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 82.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 82.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 82.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 81.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 80.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 79.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 78.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 78.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 78.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 78.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 77.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 77.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 76.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 76.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 75.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 73.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 73.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 72.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 71.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 68.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 68.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 68.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 66.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 66.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 66.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 65.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 64.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 63.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 63.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 60.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 59.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 58.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 57.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 56.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 55.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 53.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 52.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 51.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 43.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 42.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 33.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 31.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 30.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 29.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 29.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 26.8
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Brain - Putamen (basal ganglia)
Average nTPM: 134.6
Samples: 205

Max nTPM: 378.3
Min nTPM: 5.4
Std nTPM: 68.9
Median nTPM: 126.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 378.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 355.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 327.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 316.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 311.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 305.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 296.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 295.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 287.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 286.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 264.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 263.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 251.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 243.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 242.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 238.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 236.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 233.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 230.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 228.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 227.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 223.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 219.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 219.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 218.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 212.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 210.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 209.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 206.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 202.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 200.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 199.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 195.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 193.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 192.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 192.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 189.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 188.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 187.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 185.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 182.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 180.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 180.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 179.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 178.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 176.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 175.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 174.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 174.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 174.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 173.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 171.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 169.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 169.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 167.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 166.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 166.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 166.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 165.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 164.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 164.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 163.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 163.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 161.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 160.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 159.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 158.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 157.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 155.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 154.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 154.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 154.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 153.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 153.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 150.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 149.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 148.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 144.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 144.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 144.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 142.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 141.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 141.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 139.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 139.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 138.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 138.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 138.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 137.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 136.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 136.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 135.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 134.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 132.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 132.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 132.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 131.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 131.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 131.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 129.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 127.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 127.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 126.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 123.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 120.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 119.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 118.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 116.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 116.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 115.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 113.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 112.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 112.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 112.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 111.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 110.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 110.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 109.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 109.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 109.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 109.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 108.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 108.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 107.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 107.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 106.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 105.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 104.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 104.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 104.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 104.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 103.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 103.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 103.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 102.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 101.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 100.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 100.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 100.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 100.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 98.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 98.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 98.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 98.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 96.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 95.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 94.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 93.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 91.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 91.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 90.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 89.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 88.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 88.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 88.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 87.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 87.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 86.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 84.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 82.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 81.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 80.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 80.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 78.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 76.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 76.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 75.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 75.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 74.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 74.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 74.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 73.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 73.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 72.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 72.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 71.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 68.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 68.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 67.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 65.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 65.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 62.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 59.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 58.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 58.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 56.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 50.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 50.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 46.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 44.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 43.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 43.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 28.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 24.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 24.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 20.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 20.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 18.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 15.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 12.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 5.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 53.4
FF:10164-103B2 76 years, female 53.4
Nucleus accumbens
Scaled Tags Per Million: 39.3
FF:10037-101F1 23-56 years, mixed 39.3
Putamen
Scaled Tags Per Million: 68.7
FF:10176-103C5 60 years, female 68.7
Globus pallidus
Scaled Tags Per Million: 29.8
FF:10175-103C4 60 years, female 31.3
FF:10161-103A8 76 years, female 28.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.1
Pig sample Sample description nTPM
Caudate
nTPM: 40.3
Samples: 4

Max nTPM: 47.6
Min nTPM: 28.0
Sample A Female 28.0
Sample B Female 44.1
Sample C Male 47.6
Sample D Male 41.3
Putamen
nTPM: 41.1
Samples: 4

Max nTPM: 49.0
Min nTPM: 34.0
Sample A Female 41.7
Sample B Female 34.0
Sample C Male 49.0
Sample D Male 39.6
Septum
nTPM: 30.2
Samples: 4

Max nTPM: 37.1
Min nTPM: 23.3
Sample A Female 30.2
Sample B Female 30.0
Sample C Male 37.1
Sample D Male 23.3
Ventral pallidum
nTPM: 36.3
Samples: 4

Max nTPM: 54.5
Min nTPM: 26.3
Sample A Female 26.3
Sample B Female 34.9
Sample C Male 54.5
Sample D Male 29.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 53.8
Samples: 4

Max nTPM: 58.7
Min nTPM: 47.7
Sample A Male 47.7
Sample B Male 58.7
Sample C Female 57.6
Sample D Female 51.2
Septum
nTPM: 56.6
Samples: 4

Max nTPM: 61.5
Min nTPM: 51.7
Sample A Male 59.6
Sample B Male 51.7
Sample C Female 53.6
Sample D Female 61.5
Ventral forebrain
nTPM: 59.7
Samples: 4

Max nTPM: 63.2
Min nTPM: 55.9
Sample A Male 58.7
Sample B Male 61.1
Sample C Female 63.2
Sample D Female 55.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
100146154 Antisense, RP_110421_02_D11, Mouse strain C57BL/6J (56 days, male) 0.9
448 Antisense, RP_Baylor_102781, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.6
100146154 Antisense, RP_110421_02_D11, Mouse strain C57BL/6J (56 days, male) 1.2
448 Antisense, RP_Baylor_102781, Mouse strain C57BL/6J (56 days, male) 0.1

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