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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:55.3 nTPM
HPA Brain:78.0 nTPM
GTEx:55.3 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Pig:66.9 nTPM
Mouse:33.3 nTPM
Allen mouse:6.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017375
Glial cells Low
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 67.5
1781 Male, age 74, unknown 75.2
2288 Male, age 75, left hemisphere 72.9
2290 Female, age 72, unknown 70.8
2846 Female, age 79, unknown 69.1
2289 Male, age 61, right hemisphere 68.1
1857 Female, age 85, left hemisphere 65.4
1854 Male, age 80, left hemisphere 61.1
2481 Female, age 94, left hemisphere 57.5
Globus pallidus, externus
nTPM: 62.4
2646 Male, age 61, right hemisphere 68.3
2395 Male, age 75, both hemispheres 65.4
2772 Female, age 79, unknown 60.8
2567 Female, age 72, unknown 59.2
1996 Male, age 80, right hemisphere 58.5
Globus pallidus, internus
nTPM: 63.2
2287 Male, age 75, right hemisphere 70.3
2483 Female, age 94, right hemisphere 66.6
1818 Male, age 74, unknown 63.8
2566 Female, age 72, unknown 62.8
2778 Female, age 91, both hemispheres 61.8
2111 Female, age 85, right hemisphere 58.7
2037 Male, age 80, right hemisphere 58.1
Nucleus accumbens
nTPM: 69.4
1856 Female, age 91, right hemisphere 79.4
1783 Male, age 74, unknown 78.1
2698 Female, age 72, unknown 78.0
2824 Male, age 61, right hemisphere 70.8
1806 Female, age 85, left hemisphere 67.4
2286 Male, age 75, left hemisphere 62.8
2391 Female, age 94, left hemisphere 59.8
2732 Male, age 80, right hemisphere 58.7
Nucleus basalis of Meynert
nTPM: 62.8
2569 Male, age 61, both hemispheres 68.7
2821 Male, age 75, both hemispheres 64.5
2484 Female, age 94, left hemisphere 62.9
2393 Male, age 80, right hemisphere 55.1
Nucleus of the diagonal band
nTPM: 78.0
1812 Female, age 91, both hemispheres 81.1
2775 Male, age 80, right hemisphere 80.8
2195 Female, age 85, both hemispheres 80.6
1979 Male, age 74, unknown 78.5
2029 Male, age 61, right hemisphere 69.2
Putamen
nTPM: 66.7
2647 Male, age 75, left hemisphere 75.7
1838 Male, age 80, right hemisphere 68.4
1829 Male, age 74, unknown 68.3
2466 Female, age 79, unknown 64.6
1937 Female, age 91, right hemisphere 64.1
2482 Female, age 94, left hemisphere 63.5
2489 Female, age 72, unknown 62.5
Septal nuclei
nTPM: 73.4
1960 Male, age 74, unknown 86.0
2629 Female, age 94, right hemisphere 81.0
2031 Female, age 72, unknown 76.6
2059 Female, age 85, both hemispheres 72.9
2009 Female, age 91, both hemispheres 72.5
2199 Male, age 80, right hemisphere 63.6
2394 Male, age 61, left hemisphere 61.4
Stria terminalis, bed nucleus
nTPM: 74.4
1974 Female, age 91, both hemispheres 81.2
2201 Male, age 74, unknown 72.7
2486 Female, age 94, both hemispheres 69.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 44.8
Samples: 246

Max nTPM: 72.4
Min nTPM: 27.1
Std nTPM: 8.1
Median nTPM: 43.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 72.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 70.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 63.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 62.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 62.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 61.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 61.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 60.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 60.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 60.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 59.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 59.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 59.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 59.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 59.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 58.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 57.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 57.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 57.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 57.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 56.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 56.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 56.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 56.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 55.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 55.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 55.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 55.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 54.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 54.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 54.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 54.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 53.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 53.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 52.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 52.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 52.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 52.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 52.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 51.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 51.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 51.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 51.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 51.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 51.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 51.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 51.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 50.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 49.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 49.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 49.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 49.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 49.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 48.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 48.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 48.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 48.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 48.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 48.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 48.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 48.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 48.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 48.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 47.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 47.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 47.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 47.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 46.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 46.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 46.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 46.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 46.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 46.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 46.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 46.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 46.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 46.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 46.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 46.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 46.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 46.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 45.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 45.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 45.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 45.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 45.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 45.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 45.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 45.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 45.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 45.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 44.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 44.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 44.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 44.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 44.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 43.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 43.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 43.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 43.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 43.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 43.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 43.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 43.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 43.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 43.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 43.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 42.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 42.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 42.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 42.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 42.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 42.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 42.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 42.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 42.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 42.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 41.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 41.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 41.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 41.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 41.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 41.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 41.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 41.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 41.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 41.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 40.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 40.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 40.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 40.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 40.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 40.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 40.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 40.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 40.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 40.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 40.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 40.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 39.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 39.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 39.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 39.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 39.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 39.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 39.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 38.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 38.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 38.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 38.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 38.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 38.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 38.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 38.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 38.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 38.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 38.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 38.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 38.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 38.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 37.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 37.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 37.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 37.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 37.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 37.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 37.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 37.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 36.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 36.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 36.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 36.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 36.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 36.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 36.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 36.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 36.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 36.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 36.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 35.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 35.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 35.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 35.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 35.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 35.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 35.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 35.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 35.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 34.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 34.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 34.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 34.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 34.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 34.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 34.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 34.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 33.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 33.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 33.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 33.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 33.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 33.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 32.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 32.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 31.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 30.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 55.3
Samples: 246

Max nTPM: 97.6
Min nTPM: 25.8
Std nTPM: 10.6
Median nTPM: 56.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 97.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 81.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 78.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 76.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 75.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 75.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 75.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 75.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 74.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 74.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 73.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 72.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 71.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 71.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 70.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 70.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 70.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 70.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 69.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 69.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 69.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 69.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 68.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 68.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 67.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 67.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 67.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 67.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 67.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 67.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 66.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 66.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 66.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 66.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 65.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 65.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 65.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 65.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 65.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 65.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 65.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 65.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 64.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 64.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 64.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 64.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 64.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 64.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 64.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 63.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 63.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 63.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 63.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 63.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 63.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 63.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 63.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 63.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 63.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 63.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 62.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 62.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 62.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 62.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 62.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 62.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 62.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 62.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 62.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 61.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 61.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 61.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 61.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 61.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 61.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 61.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 61.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 60.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 60.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 60.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 60.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 60.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 60.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 60.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 60.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 60.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 60.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 60.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 59.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 59.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 59.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 59.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 58.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 58.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 58.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 58.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 58.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 58.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 58.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 58.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 58.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 58.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 58.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 58.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 58.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 58.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 57.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 57.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 57.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 57.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 57.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 57.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 57.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 57.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 57.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 57.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 56.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 56.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 56.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 56.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 56.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 56.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 56.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 56.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 55.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 55.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 55.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 55.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 55.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 55.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 55.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 54.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 54.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 54.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 54.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 54.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 54.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 54.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 54.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 54.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 53.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 52.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 52.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 52.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 52.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 52.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 52.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 52.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 51.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 51.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 51.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 50.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 50.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 50.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 50.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 50.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 50.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 50.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 50.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 50.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 49.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 49.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 49.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 49.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 49.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 49.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 49.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 49.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 48.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 48.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 48.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 48.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 48.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 48.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 48.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 47.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 47.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 47.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 47.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 47.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 47.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 47.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 46.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 46.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 46.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 46.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 46.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 46.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 46.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 46.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 46.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 46.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 45.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 45.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 45.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 45.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 44.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 44.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 43.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 43.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 43.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 42.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 42.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 42.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 42.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 42.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 42.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 42.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 42.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 42.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 41.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 41.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 41.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 41.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 41.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 41.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 40.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 40.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 40.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 40.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 40.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 39.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 39.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 39.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 38.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 38.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 38.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 38.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 38.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 37.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 36.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 35.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 35.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 33.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 32.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 31.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 31.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 25.8
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Brain - Putamen (basal ganglia)
Average nTPM: 45.6
Samples: 205

Max nTPM: 72.2
Min nTPM: 31.6
Std nTPM: 7.8
Median nTPM: 44.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 72.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 71.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 66.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 63.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 61.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 60.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 60.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 60.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 59.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 59.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 59.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 58.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 57.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 56.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 56.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 56.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 56.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 56.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 56.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 56.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 55.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 55.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 55.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 55.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 55.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 54.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 54.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 54.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 54.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 53.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 53.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 53.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 52.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 52.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 52.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 52.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 52.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 52.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 52.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 52.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 52.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 51.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 51.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 51.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 51.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 51.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 50.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 50.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 50.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 50.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 50.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 49.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 49.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 49.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 49.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 49.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 49.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 48.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 48.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 48.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 48.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 48.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 48.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 48.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 48.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 47.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 47.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 47.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 47.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 47.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 47.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 46.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 46.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 46.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 46.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 46.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 46.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 46.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 46.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 45.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 45.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 45.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 45.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 45.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 45.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 44.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 44.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 44.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 44.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 44.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 44.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 44.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 44.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 44.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 44.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 44.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 44.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 44.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 44.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 43.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 43.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 43.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 43.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 43.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 43.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 43.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 42.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 42.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 42.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 42.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 42.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 42.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 42.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 42.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 42.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 42.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 42.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 42.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 42.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 42.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 41.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 41.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 41.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 41.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 41.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 41.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 41.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 41.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 41.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 41.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 41.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 40.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 40.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 40.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 40.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 40.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 39.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 39.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 39.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 39.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 39.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 39.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 38.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 38.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 38.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 38.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 38.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 38.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 38.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 38.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 38.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 38.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 38.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 38.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 38.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 38.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 38.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 37.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 37.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 37.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 37.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 37.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 37.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 37.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 37.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 36.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 36.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 36.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 36.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 36.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 35.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 35.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 35.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 35.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 34.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 34.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 34.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 34.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 33.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 33.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 33.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 33.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 33.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 32.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 32.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 31.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 56.5
FF:10164-103B2 76 years, female 56.5
Nucleus accumbens
Scaled Tags Per Million: 52.6
FF:10037-101F1 23-56 years, mixed 52.6
Putamen
Scaled Tags Per Million: 70.4
FF:10176-103C5 60 years, female 70.4
Globus pallidus
Scaled Tags Per Million: 40.1
FF:10161-103A8 76 years, female 41.0
FF:10175-103C4 60 years, female 39.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.9
Pig sample Sample description nTPM
Caudate
nTPM: 66.9
Samples: 4

Max nTPM: 78.0
Min nTPM: 57.7
Sample A Female 57.7
Sample B Female 70.2
Sample C Male 78.0
Sample D Male 61.6
Putamen
nTPM: 63.5
Samples: 4

Max nTPM: 73.6
Min nTPM: 49.4
Sample A Female 49.4
Sample B Female 58.8
Sample C Male 73.6
Sample D Male 72.2
Septum
nTPM: 60.7
Samples: 4

Max nTPM: 65.9
Min nTPM: 53.9
Sample A Female 65.9
Sample B Female 60.3
Sample C Male 62.7
Sample D Male 53.9
Ventral pallidum
nTPM: 61.6
Samples: 4

Max nTPM: 63.6
Min nTPM: 59.5
Sample A Female 63.6
Sample B Female 59.5
Sample C Male 60.7
Sample D Male 62.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 33.3
Samples: 4

Max nTPM: 33.9
Min nTPM: 31.9
Sample A Male 33.9
Sample B Male 33.7
Sample C Female 33.8
Sample D Female 31.9
Septum
nTPM: 30.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 28.6
Sample A Male 31.3
Sample B Male 30.7
Sample C Female 28.6
Sample D Female 32.0
Ventral forebrain
nTPM: 29.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 27.8
Sample A Male 27.8
Sample B Male 31.4
Sample C Female 29.4
Sample D Female 31.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.1
583864 Antisense, RP_040831_01_C03, Mouse strain C57BL/6J (56 days, male) 6.1
Pallidum
Expression energy: 5.5
583864 Antisense, RP_040831_01_C03, Mouse strain C57BL/6J (56 days, male) 5.5

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