HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.1 nTPM
HPA Brain:32.5 nTPM
GTEx:17.1 nTPM
FANTOM5:62.3 Scaled Tags Per Million
Pig:68.2 nTPM
Mouse:22.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056003
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 32.5
Sample id Sample description nTPM
Hippocampus
nTPM: 32.5
2148 Female, age 91, left hemisphere 44.3
1911 Female, age 85, right hemisphere 36.6
1898 Male, age 80, left hemisphere 35.2
2529 Female, age 94, left hemisphere 30.1
2621 Female, age 67, right hemisphere 25.8
1855 Male, age 76, left hemisphere 22.8
Dentate gyrus
nTPM: 25.5
2528 Male, age 74, both hemispheres 44.1
1927 Female, age 91, both hemispheres 29.7
2530 Female, age 94, left hemisphere 26.8
2246 Female, age 85, both hemispheres 26.1
2531 Female, age 67, both hemispheres 14.5
2010 Male, age 76, both hemispheres 11.5
Entorhinal gyrus
nTPM: 20.8
2117 Female, age 91, right hemisphere 38.6
1938 Female, age 85, left hemisphere 22.5
2686 Male, age 75, right hemisphere 17.8
1787 Male, age 76, left hemisphere 17.0
2764 Male, age 80, right hemisphere 15.8
2613 Female, age 94, left hemisphere 13.0
Hippocampus, CA1
nTPM: 24.0
2527 Male, age 74, both hemispheres 38.4
1873 Female, age 85, both hemispheres 32.2
2082 Female, age 91, right hemisphere 19.0
2749 Male, age 80, left hemisphere 18.8
2045 Male, age 76, both hemispheres 11.6
Hippocampus, CA2
nTPM: 26.8
1963 Male, age 80, left hemisphere 37.6
1940 Female, age 85, left hemisphere 35.3
2249 Male, age 74, both hemispheres 30.6
2113 Female, age 91, right hemisphere 22.7
2437 Female, age 94, left hemisphere 22.2
1892 Male, age 76, both hemispheres 12.7
Hippocampus, CA3
nTPM: 26.8
2620 Female, age 94, left hemisphere 36.9
1891 Female, age 85, both hemispheres 31.9
2436 Male, age 74, both hemispheres 28.7
2861 Female, age 67, both hemispheres 28.4
2137 Male, age 80, left hemisphere 19.7
1867 Male, age 76, both hemispheres 15.2
Parahippocampal cortex
nTPM: 21.2
2692 Male, age 74, both hemispheres 35.2
2622 Female, age 67, right hemisphere 28.5
1933 Female, age 85, both hemispheres 23.5
1990 Female, age 91, right hemisphere 21.1
2245 Female, age 91, both hemispheres 20.7
2250 Female, age 67, right hemisphere 20.0
1850 Male, age 80, both hemispheres 17.7
2018 Male, age 76, both hemispheres 16.1
2693 Female, age 94, both hemispheres 15.3
2532 Female, age 72, left hemisphere 14.4
Perirhinal gyrus
nTPM: 14.3
1794 Male, age 80, right hemisphere 19.4
1847 Female, age 91, left hemisphere 17.0
1841 Female, age 85, right hemisphere 14.8
2521 Female, age 94, right hemisphere 11.8
2848 Male, age 76, right hemisphere 8.5
Subiculum
nTPM: 25.1
2729 Female, age 91, right hemisphere 44.8
2619 Male, age 74, both hemispheres 40.0
1901 Male, age 80, both hemispheres 18.4
2438 Female, age 94, left hemisphere 16.8
1977 Female, age 85, both hemispheres 16.7
2042 Male, age 76, both hemispheres 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.1
Samples: 197

Max nTPM: 42.5
Min nTPM: 2.6
Std nTPM: 8.9
Median nTPM: 15.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 42.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 42.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 41.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 39.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 38.6
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 36.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 35.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 35.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 34.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 34.5
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 34.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 62.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.3
FF:10153-102I9 76 years, female 69.6
FF:10169-103B7 60 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 68.2
Pig sample Sample description nTPM
Subiculum
nTPM: 68.2
Samples: 4

Max nTPM: 81.1
Min nTPM: 55.6
Sample A Female 81.1
Sample B Female 73.7
Sample C Male 62.4
Sample D Male 55.6
Dorsal hippocampus
nTPM: 60.9
Samples: 4

Max nTPM: 70.1
Min nTPM: 55.5
Sample A Female 61.5
Sample B Female 56.3
Sample C Male 70.1
Sample D Male 55.5
Entorhinal cortex
nTPM: 68.0
Samples: 4

Max nTPM: 75.1
Min nTPM: 54.3
Sample A Female 68.8
Sample B Female 73.7
Sample C Male 75.1
Sample D Male 54.3
Ventral hippocampus
nTPM: 66.0
Samples: 4

Max nTPM: 91.4
Min nTPM: 53.9
Sample A Female 53.9
Sample B Female 57.8
Sample C Male 91.4
Sample D Male 60.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 23.6
Min nTPM: 18.6
Sample A Male 22.9
Sample B Male 18.6
Sample C Female 23.6
Sample D Female 22.9
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.4
Sample A Male 18.7
Sample B Male 16.4
Sample C Female 18.5
Sample D Female 23.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75198214 Antisense, RP_060502_02_B10, Mouse strain C57BL/6J (56 days, male) 0.2

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