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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:78.1 nTPM
HPA Brain:168.6 nTPM
GTEx:78.1 nTPM
FANTOM5:263.7 Scaled Tags Per Million
Pig:255.4 nTPM
Mouse:57.1 nTPM
Allen mouse:12.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA062351
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 135.0
2481 Female, age 94, left hemisphere 153.3
2288 Male, age 75, left hemisphere 147.1
2290 Female, age 72, unknown 144.0
2846 Female, age 79, unknown 143.1
1857 Female, age 85, left hemisphere 136.5
1854 Male, age 80, left hemisphere 131.9
1781 Male, age 74, unknown 123.8
2289 Male, age 61, right hemisphere 100.4
Globus pallidus, externus
nTPM: 157.6
1996 Male, age 80, right hemisphere 182.0
2395 Male, age 75, both hemispheres 161.9
2646 Male, age 61, right hemisphere 155.7
2772 Female, age 79, unknown 151.5
2567 Female, age 72, unknown 136.9
Globus pallidus, internus
nTPM: 168.6
2287 Male, age 75, right hemisphere 203.1
2483 Female, age 94, right hemisphere 194.1
2778 Female, age 91, both hemispheres 179.1
2111 Female, age 85, right hemisphere 163.0
2037 Male, age 80, right hemisphere 157.3
1818 Male, age 74, unknown 149.0
2566 Female, age 72, unknown 134.5
Nucleus accumbens
nTPM: 146.1
2391 Female, age 94, left hemisphere 172.7
2698 Female, age 72, unknown 161.0
2286 Male, age 75, left hemisphere 153.3
2824 Male, age 61, right hemisphere 141.5
1806 Female, age 85, left hemisphere 141.3
1783 Male, age 74, unknown 140.0
2732 Male, age 80, right hemisphere 132.6
1856 Female, age 91, right hemisphere 126.3
Nucleus basalis of Meynert
nTPM: 138.6
2569 Male, age 61, both hemispheres 163.9
2393 Male, age 80, right hemisphere 140.4
2821 Male, age 75, both hemispheres 125.7
2484 Female, age 94, left hemisphere 124.5
Nucleus of the diagonal band
nTPM: 129.8
1812 Female, age 91, both hemispheres 145.0
1979 Male, age 74, unknown 131.1
2775 Male, age 80, right hemisphere 129.7
2029 Male, age 61, right hemisphere 125.2
2195 Female, age 85, both hemispheres 118.2
Putamen
nTPM: 133.0
1829 Male, age 74, unknown 151.4
2482 Female, age 94, left hemisphere 144.6
2466 Female, age 79, unknown 132.4
1937 Female, age 91, right hemisphere 130.2
1838 Male, age 80, right hemisphere 129.8
2647 Male, age 75, left hemisphere 128.6
2489 Female, age 72, unknown 114.2
Septal nuclei
nTPM: 122.0
2199 Male, age 80, right hemisphere 131.2
2031 Female, age 72, unknown 129.4
2394 Male, age 61, left hemisphere 128.1
2009 Female, age 91, both hemispheres 124.1
2629 Female, age 94, right hemisphere 124.1
1960 Male, age 74, unknown 115.8
2059 Female, age 85, both hemispheres 101.0
Stria terminalis, bed nucleus
nTPM: 113.6
1974 Female, age 91, both hemispheres 124.0
2201 Male, age 74, unknown 112.6
2486 Female, age 94, both hemispheres 104.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 73.7
Samples: 246

Max nTPM: 119.4
Min nTPM: 42.7
Std nTPM: 11.8
Median nTPM: 72.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 119.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 111.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 106.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 106.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 103.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 102.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 99.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 97.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 96.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 94.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 93.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 93.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 92.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 92.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 92.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 92.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 91.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 91.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 91.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 91.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 90.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 90.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 89.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 89.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 88.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 88.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 88.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 88.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 88.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 88.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 87.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 87.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 87.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 86.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 86.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 84.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 84.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 84.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 83.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 82.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 82.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 82.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 82.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 82.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 82.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 82.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 81.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 81.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 81.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 81.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 81.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 81.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 81.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 80.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 80.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 80.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 80.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 79.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 79.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 79.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 79.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 79.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 79.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 78.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 78.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 78.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 78.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 78.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 78.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 78.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 78.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 78.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 77.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 77.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 77.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 77.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 77.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 77.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 77.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 76.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 76.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 76.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 76.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 76.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 76.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 76.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 75.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 75.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 74.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 74.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 74.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 74.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 74.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 74.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 74.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 74.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 73.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 73.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 73.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 73.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 73.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 73.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 73.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 72.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 72.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 72.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 72.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 72.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 72.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 72.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 72.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 72.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 72.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 72.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 72.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 72.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 71.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 71.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 71.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 71.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 71.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 71.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 71.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 71.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 71.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 70.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 70.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 70.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 70.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 70.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 70.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 70.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 70.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 70.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 69.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 69.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 69.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 69.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 69.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 68.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 68.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 68.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 68.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 68.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 68.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 68.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 68.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 67.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 67.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 67.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 67.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 67.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 67.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 67.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 67.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 66.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 66.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 66.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 66.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 66.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 66.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 66.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 65.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 65.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 65.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 65.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 65.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 65.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 65.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 65.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 64.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 64.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 64.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 64.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 63.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 63.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 63.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 63.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 63.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 63.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 63.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 62.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 62.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 62.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 62.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 61.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 61.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 61.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 61.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 60.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 60.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 60.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 60.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 60.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 59.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 59.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 59.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 58.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 58.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 57.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 56.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 56.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 55.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 54.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 54.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 53.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 53.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 53.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 51.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 42.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 74.9
Samples: 246

Max nTPM: 137.6
Min nTPM: 41.2
Std nTPM: 12.9
Median nTPM: 73.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 137.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 107.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 106.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 103.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 103.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 101.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 100.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 100.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 100.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 100.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 99.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 99.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 98.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 98.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 97.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 97.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 97.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 96.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 96.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 95.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 95.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 95.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 95.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 95.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 94.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 91.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 91.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 90.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 90.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 90.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 90.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 90.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 89.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 89.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 89.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 88.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 88.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 88.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 87.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 87.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 87.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 87.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 86.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 86.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 86.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 86.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 86.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 86.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 86.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 86.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 85.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 84.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 84.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 83.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 83.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 83.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 82.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 82.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 82.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 82.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 82.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 81.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 81.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 81.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 81.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 81.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 80.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 80.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 80.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 80.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 80.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 80.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 80.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 79.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 79.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 79.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 79.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 79.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 79.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 78.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 78.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 78.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 78.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 78.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 78.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 78.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 78.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 78.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 78.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 78.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 77.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 77.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 77.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 77.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 76.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 76.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 76.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 76.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 76.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 76.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 76.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 75.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 75.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 75.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 75.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 75.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 75.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 75.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 75.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 75.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 74.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 74.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 74.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 74.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 74.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 74.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 74.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 74.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 73.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 73.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 73.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 73.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 73.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 73.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 72.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 72.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 72.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 72.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 72.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 72.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 72.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 72.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 72.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 71.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 71.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 71.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 71.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 71.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 71.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 71.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 71.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 71.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 71.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 70.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 70.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 70.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 70.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 70.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 70.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 70.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 70.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 70.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 70.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 69.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 69.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 69.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 68.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 68.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 68.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 68.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 68.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 68.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 68.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 68.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 68.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 68.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 68.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 68.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 68.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 68.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 67.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 67.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 67.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 67.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 67.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 67.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 66.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 66.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 66.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 66.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 66.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 66.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 66.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 66.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 65.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 65.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 65.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 65.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 65.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 65.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 65.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 65.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 64.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 64.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 64.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 64.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 64.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 64.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 64.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 64.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 64.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 63.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 63.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 62.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 62.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 61.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 61.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 61.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 61.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 61.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 60.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 60.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 60.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 60.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 60.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 60.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 60.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 60.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 60.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 59.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 59.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 59.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 59.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 59.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 59.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 58.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 58.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 58.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 58.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 57.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 57.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 56.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 56.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 55.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 54.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 53.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 50.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 49.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 45.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 44.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.2
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Brain - Putamen (basal ganglia)
Average nTPM: 78.1
Samples: 205

Max nTPM: 134.5
Min nTPM: 40.5
Std nTPM: 13.4
Median nTPM: 75.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 134.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 123.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 121.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 113.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 112.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 111.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 107.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 105.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 105.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 105.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 104.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 103.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 102.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 100.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 100.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 99.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 99.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 98.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 98.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 97.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 96.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 96.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 95.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 95.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 93.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 93.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 93.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 92.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 91.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 90.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 90.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 90.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 89.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 89.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 89.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 88.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 88.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 88.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 88.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 87.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 87.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 87.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 86.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 86.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 86.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 85.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 85.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 85.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 85.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 84.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 84.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 84.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 84.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 84.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 84.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 84.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 84.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 83.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 83.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 82.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 82.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 82.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 82.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 82.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 82.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 81.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 81.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 80.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 80.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 80.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 80.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 80.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 80.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 80.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 79.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 79.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 79.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 79.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 79.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 79.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 79.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 78.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 78.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 77.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 77.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 77.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 77.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 77.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 76.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 76.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 76.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 76.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 76.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 76.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 76.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 76.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 76.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 75.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 75.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 75.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 75.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 75.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 75.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 75.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 75.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 75.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 75.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 74.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 74.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 74.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 74.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 74.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 74.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 74.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 74.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 74.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 74.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 74.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 73.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 73.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 73.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 73.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 73.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 73.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 73.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 72.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 72.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 72.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 72.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 72.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 72.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 72.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 72.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 71.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 71.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 71.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 71.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 71.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 71.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 70.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 70.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 70.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 70.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 70.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 70.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 70.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 70.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 70.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 70.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 69.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 69.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 69.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 69.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 69.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 69.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 68.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 68.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 68.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 68.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 68.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 68.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 67.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 67.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 67.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 67.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 67.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 67.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 67.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 67.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 66.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 66.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 66.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 66.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 66.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 65.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 65.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 65.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 65.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 64.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 64.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 64.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 63.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 63.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 63.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 63.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 62.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 62.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 61.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 60.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 60.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 58.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 58.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 56.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 56.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 55.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 52.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 40.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

263.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 185.9
FF:10164-103B2 76 years, female 185.9
Nucleus accumbens
Scaled Tags Per Million: 159.2
FF:10037-101F1 23-56 years, mixed 159.2
Putamen
Scaled Tags Per Million: 263.7
FF:10176-103C5 60 years, female 263.7
Globus pallidus
Scaled Tags Per Million: 172.1
FF:10161-103A8 76 years, female 182.6
FF:10175-103C4 60 years, female 161.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.4
Pig sample Sample description nTPM
Caudate
nTPM: 216.9
Samples: 4

Max nTPM: 237.4
Min nTPM: 200.6
Sample A Female 228.4
Sample B Female 201.1
Sample C Male 237.4
Sample D Male 200.6
Putamen
nTPM: 255.4
Samples: 4

Max nTPM: 287.8
Min nTPM: 222.1
Sample A Female 271.2
Sample B Female 222.1
Sample C Male 287.8
Sample D Male 240.5
Septum
nTPM: 230.4
Samples: 4

Max nTPM: 256.4
Min nTPM: 218.3
Sample A Female 256.4
Sample B Female 221.2
Sample C Male 225.8
Sample D Male 218.3
Ventral pallidum
nTPM: 229.1
Samples: 4

Max nTPM: 242.8
Min nTPM: 222.6
Sample A Female 242.8
Sample B Female 222.6
Sample C Male 223.7
Sample D Male 227.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 57.1
Samples: 4

Max nTPM: 59.2
Min nTPM: 54.4
Sample A Male 56.8
Sample B Male 54.4
Sample C Female 58.1
Sample D Female 59.2
Septum
nTPM: 43.0
Samples: 4

Max nTPM: 46.3
Min nTPM: 38.0
Sample A Male 43.7
Sample B Male 43.8
Sample C Female 38.0
Sample D Female 46.3
Ventral forebrain
nTPM: 47.1
Samples: 4

Max nTPM: 51.5
Min nTPM: 44.6
Sample A Male 51.5
Sample B Male 46.4
Sample C Female 44.6
Sample D Female 45.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.6
68162273 Antisense, RP_041122_02_G07, Mouse strain C57BL/6J (56 days, male) 12.6
Pallidum
Expression energy: 8.8
68162273 Antisense, RP_041122_02_G07, Mouse strain C57BL/6J (56 days, male) 8.8

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