PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:165.9 nTPM
FANTOM5:169.3 Scaled Tags Per Million
Pig:245.5 nTPM
Mouse:33.6 nTPM
Allen mouse:3.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 165.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 133.3
2301 Female, age 85, both hemispheres 147.6
2188 Female, age 91, both hemispheres 144.9
2090 Male, age 80, both hemispheres 124.3
1984 Male, age 76, both hemispheres 116.3
Area postrema
nTPM: 165.9
2799 Male, age 61, both hemispheres 218.7
2306 Male, age 80, both hemispheres 156.1
2054 Male, age 76, both hemispheres 122.9
Dorsal cochlear nucleus
nTPM: 140.8
2802 Male, age 74, right hemisphere 179.7
2187 Female, age 91, both hemispheres 141.8
2378 Male, age 80, both hemispheres 141.5
2058 Male, age 76, both hemispheres 126.8
2370 Male, age 61, both hemispheres 114.5
Dorsal medullary reticular nucleus
nTPM: 120.8
2373 Male, age 61, both hemispheres 130.4
2040 Female, age 85, both hemispheres 124.8
2088 Male, age 76, both hemispheres 107.3
Dorsal motor vagal complex
nTPM: 128.9
2797 Male, age 61, both hemispheres 165.2
2643 Male, age 74, both hemispheres 143.4
2185 Male, age 76, both hemispheres 136.1
2813 Female, age 72, unknown 130.6
2133 Female, age 91, both hemispheres 117.8
2000 Male, age 74, unknown 115.4
2807 Female, age 85, both hemispheres 112.6
2844 Male, age 55, unknown 110.0
Dorsal tegmental nucleus
nTPM: 126.0
2326 Male, age 74, both hemispheres 149.6
2083 Male, age 80, both hemispheres 127.5
1936 Male, age 76, left hemisphere 124.2
2358 Male, age 61, both hemispheres 102.6
Dorsolateral tegmental area
nTPM: 121.0
2751 Female, age 85, both hemispheres 150.0
2654 Male, age 80, both hemispheres 132.9
2360 Male, age 74, both hemispheres 127.7
2141 Male, age 76, both hemispheres 105.5
2337 Male, age 61, both hemispheres 88.8
Gigantocellular reticular nuclei, medullary
nTPM: 130.7
2387 Female, age 91, both hemispheres 152.8
2314 Male, age 61, both hemispheres 151.4
1876 Female, age 85, both hemispheres 134.6
2022 Male, age 76, right hemisphere 122.9
2310 Male, age 80, both hemispheres 111.7
2462 Male, age 74, both hemispheres 110.5
Gigantocellular reticular nuclei, pars
nTPM: 114.3
2330 Male, age 80, both hemispheres 117.3
2168 Male, age 76, both hemispheres 116.7
2336 Male, age 61, both hemispheres 114.9
2084 Female, age 85, both hemispheres 114.2
2706 Male, age 80, both hemispheres 108.3
Inferior olive
nTPM: 143.6
2563 Male, age 74, both hemispheres 152.8
2379 Male, age 80, both hemispheres 148.2
2085 Female, age 85, both hemispheres 144.5
2178 Male, age 61, both hemispheres 139.5
2628 Female, age 91, both hemispheres 133.2
Kolliker-Fuse nucleus
nTPM: 143.5
2315 Male, age 76, right hemisphere 183.1
2793 Female, age 91, left hemisphere 130.1
2163 Male, age 80, both hemispheres 117.3
Lateral lemniscal nuclei
nTPM: 118.8
2169 Male, age 76, both hemispheres 126.8
2320 Female, age 91, left hemisphere 122.6
2746 Female, age 85, left hemisphere 118.0
2453 Male, age 74, right hemisphere 116.9
2036 Male, age 80, both hemispheres 109.7
Lateral medullary reticular nucleus
nTPM: 142.5
2804 Female, age 91, both hemispheres 157.7
2305 Male, age 74, both hemispheres 154.1
2374 Male, age 61, both hemispheres 144.1
2190 Female, age 85, both hemispheres 141.9
2044 Male, age 76, both hemispheres 130.5
2852 Male, age 80, both hemispheres 126.7
Lateral parabrachial nucleus
nTPM: 132.0
2792 Male, age 76, both hemispheres 179.6
2013 Male, age 80, both hemispheres 132.7
2139 Female, age 85, right hemisphere 119.1
2790 Male, age 61, both hemispheres 96.7
Lateral vestibular nucleus
nTPM: 122.8
2311 Male, age 80, both hemispheres 133.2
2184 Male, age 76, both hemispheres 112.5
Locus coeruleus
nTPM: 113.6
2788 Male, age 74, unknown 130.6
2720 Male, age 74, both hemispheres 123.7
2317 Female, age 72, unknown 118.2
2014 Male, age 55, unknown 116.4
2162 Male, age 80, both hemispheres 110.2
2123 Female, age 91, both hemispheres 100.1
1980 Male, age 76, both hemispheres 95.9
Medial olivary nucleus
nTPM: 162.7
1962 Male, age 76, both hemispheres 175.6
2138 Female, age 91, both hemispheres 175.2
1943 Male, age 61, both hemispheres 159.4
2851 Male, age 80, both hemispheres 140.6
Medial parabrachial nucleus
nTPM: 121.3
2170 Female, age 91, both hemispheres 138.0
2854 Male, age 80, both hemispheres 127.4
2463 Female, age 85, right hemisphere 120.7
2786 Male, age 76, both hemispheres 120.4
2156 Male, age 61, both hemispheres 99.8
Medial periolivary nuclei
nTPM: 125.3
2063 Male, age 76, both hemispheres 141.0
2791 Male, age 74, right hemisphere 139.1
2081 Male, age 80, both hemispheres 118.6
2458 Female, age 91, both hemispheres 114.4
2171 Female, age 85, both hemispheres 113.4
Medial vestibular nucleus
nTPM: 124.5
2803 Female, age 91, both hemispheres 147.0
2801 Male, age 74, both hemispheres 134.0
2093 Male, age 80, both hemispheres 123.6
2743 Female, age 85, both hemispheres 123.4
2134 Male, age 76, both hemispheres 113.8
2624 Male, age 61, both hemispheres 105.1
Motor facial nucleus
nTPM: 125.0
2795 Female, age 91, both hemispheres 137.7
2365 Male, age 74, right hemisphere 133.0
2062 Male, age 76, both hemispheres 129.6
2697 Female, age 85, both hemispheres 128.5
2126 Male, age 61, both hemispheres 114.2
2327 Male, age 80, both hemispheres 107.3
Motor hypoglossal nucleus
nTPM: 121.6
2125 Female, age 91, both hemispheres 136.5
2461 Male, age 61, both hemispheres 133.5
2132 Female, age 85, both hemispheres 121.6
2182 Male, age 80, both hemispheres 109.3
2277 Male, age 76, both hemispheres 107.1
Motor trigeminal nucleus
nTPM: 112.1
2309 Male, age 76, both hemispheres 125.9
2321 Female, age 91, both hemispheres 112.6
2560 Male, age 74, both hemispheres 108.7
2079 Male, age 80, both hemispheres 107.5
2335 Male, age 61, both hemispheres 105.8
Nuclei of the trapezoid body
nTPM: 122.9
1983 Male, age 76, both hemispheres 133.7
2368 Female, age 91, both hemispheres 127.9
2159 Male, age 61, both hemispheres 126.4
2166 Male, age 80, both hemispheres 114.9
2735 Female, age 85, both hemispheres 111.8
Nucleus ambiguus
nTPM: 124.9
2071 Male, age 76, both hemispheres 179.9
2096 Female, age 85, both hemispheres 69.9
Nucleus cuneatus
nTPM: 124.3
2380 Male, age 80, both hemispheres 152.5
2808 Female, age 85, both hemispheres 137.9
2805 Female, age 91, both hemispheres 135.8
2564 Male, age 74, both hemispheres 131.1
2381 Male, age 80, both hemispheres 126.1
2376 Male, age 61, both hemispheres 117.9
2562 Male, age 61, both hemispheres 110.5
2100 Male, age 76, both hemispheres 106.4
2131 Male, age 76, both hemispheres 100.5
Nucleus gracilis
nTPM: 141.8
2627 Male, age 74, both hemispheres 148.7
2382 Male, age 80, both hemispheres 142.4
2299 Female, age 85, both hemispheres 134.3
Nucleus raphe magnus
nTPM: 118.6
2051 Male, age 76, both hemispheres 125.5
2455 Male, age 74, both hemispheres 124.8
2459 Female, age 91, both hemispheres 122.1
2160 Male, age 61, both hemispheres 118.8
2328 Male, age 80, both hemispheres 117.5
2172 Female, age 85, both hemispheres 102.6
Nucleus raphe obscurus
nTPM: 155.9
2142 Male, age 76, midline 169.4
2845 Female, age 85, midline 163.1
2800 Male, age 61, midline 135.3
Nucleus raphe pallidus
nTPM: 154.0
2145 Male, age 76, midline 169.2
1924 Male, age 61, midline 168.6
2183 Male, age 80, midline 124.2
Nucleus tractus solitarii
nTPM: 127.6
2144 Female, age 91, right hemisphere 197.2
2191 Female, age 85, both hemispheres 112.4
2656 Male, age 76, both hemispheres 111.3
2307 Male, age 80, both hemispheres 89.5
Paramedian reticular nucleus
nTPM: 130.1
2052 Male, age 76, both hemispheres 154.2
2050 Female, age 85, both hemispheres 122.7
2057 Male, age 80, both hemispheres 122.1
2313 Male, age 61, both hemispheres 121.5
Parvicellular reticular nuclei
nTPM: 119.4
2095 Male, age 76, both hemispheres 134.1
2119 Male, age 80, both hemispheres 125.9
2558 Male, age 74, both hemispheres 98.1
Parvicellular reticular nuclei, medullary
nTPM: 118.7
2189 Female, age 91, both hemispheres 125.5
2181 Male, age 80, left hemisphere 122.2
2091 Female, age 85, both hemispheres 108.5
Pedunculopontine tegmental nucleus
nTPM: 128.4
2334 Male, age 80, both hemispheres 141.2
1921 Female, age 85, both hemispheres 125.0
2338 Male, age 61, both hemispheres 119.1
Peritrigeminal nucleus
nTPM: 134.2
2136 Male, age 76, both hemispheres 143.5
2067 Female, age 85, both hemispheres 129.5
2179 Male, age 61, both hemispheres 129.4
Pontine nuclei
nTPM: 124.8
2454 Male, age 74, left hemisphere 145.1
2319 Female, age 91, both hemispheres 140.7
1863 Male, age 55, unknown 136.7
2109 Female, age 72, unknown 131.7
1968 Male, age 76, left hemisphere 128.9
2727 Male, age 61, right hemisphere 121.3
2787 Female, age 85, both hemispheres 97.9
2115 Male, age 80, left hemisphere 96.4
Pontine raphe nucleus
nTPM: 119.3
2122 Female, age 85, midline 120.9
2853 Male, age 76, midline 117.8
Posteroventral cochlear nucleus
nTPM: 137.4
2135 Female, age 91, both hemispheres 153.9
2341 Male, age 80, both hemispheres 150.9
2371 Male, age 61, both hemispheres 131.5
2070 Male, age 76, both hemispheres 127.9
2752 Female, age 85, both hemispheres 122.8
Prepositus hypoglossal nucleus
nTPM: 130.1
2855 Female, age 85, right hemisphere 144.4
2086 Male, age 80, both hemispheres 115.7
Principal sensory trigeminal nucleus
nTPM: 115.4
2367 Female, age 91, left hemisphere 133.2
2324 Male, age 76, both hemispheres 118.5
2158 Male, age 61, both hemispheres 106.5
2008 Male, age 80, left hemisphere 103.5
Reticular pontine nucleus, caudal
nTPM: 125.6
2457 Female, age 91, both hemispheres 138.3
2092 Male, age 76, both hemispheres 136.1
2559 Male, age 74, both hemispheres 127.4
2332 Male, age 80, right hemisphere 100.7
Reticular pontine nucleus, oral
nTPM: 131.3
2366 Female, age 91, both hemispheres 144.9
1939 Male, age 80, both hemispheres 138.7
2012 Female, age 85, both hemispheres 128.7
2167 Male, age 76, both hemispheres 126.9
2361 Male, age 74, both hemispheres 117.2
Reticulotegmental nucleus
nTPM: 125.1
2322 Female, age 91, both hemispheres 136.2
2452 Male, age 74, both hemispheres 129.5
2333 Male, age 80, both hemispheres 121.0
2325 Male, age 76, both hemispheres 113.5
Spinal trigeminal nucleus, caudal
nTPM: 126.3
2312 Male, age 61, both hemispheres 133.3
2390 Female, age 91, both hemispheres 127.7
2308 Male, age 80, both hemispheres 125.5
2642 Male, age 74, both hemispheres 125.5
2447 Male, age 76, both hemispheres 119.4
Spinal trigeminal nucleus, interpolar
nTPM: 123.9
2389 Female, age 91, both hemispheres 132.6
2066 Male, age 76, right hemisphere 129.7
2386 Female, age 85, both hemispheres 125.8
2033 Male, age 80, both hemispheres 118.6
2625 Male, age 61, both hemispheres 113.1
Spinal trigeminal nucleus, oral
nTPM: 118.0
1978 Male, age 76, both hemispheres 125.3
2164 Male, age 80, both hemispheres 116.3
2737 Female, age 85, both hemispheres 112.3
Spinal vestibular nucleus
nTPM: 133.6
2384 Male, age 74, both hemispheres 155.7
2806 Female, age 85, both hemispheres 147.8
2748 Male, age 76, both hemispheres 135.7
2186 Female, age 91, both hemispheres 132.2
2780 Male, age 80, both hemispheres 115.0
2796 Male, age 61, both hemispheres 115.0
Subcoeruleus area
nTPM: 130.3
2369 Female, age 85, left hemisphere 157.2
2451 Male, age 74, both hemispheres 134.7
1958 Male, age 80, both hemispheres 131.0
2323 Female, age 91, left hemisphere 116.7
2089 Male, age 76, left hemisphere 112.1
Superior olive
nTPM: 125.0
2020 Male, age 76, both hemispheres 140.7
2364 Male, age 74, right hemisphere 139.4
1875 Female, age 85, both hemispheres 127.1
2329 Male, age 80, right hemisphere 111.8
2561 Female, age 91, both hemispheres 106.1
Superior vestibular nucleus
nTPM: 145.2
2383 Male, age 74, both hemispheres 169.3
2015 Male, age 80, both hemispheres 136.4
2061 Male, age 76, both hemispheres 129.9
Ventral medullary reticular nucleus
nTPM: 133.7
2372 Male, age 61, both hemispheres 148.9
2060 Male, age 76, both hemispheres 118.6
Ventral periolivary nuclei
nTPM: 120.9
2023 Male, age 76, both hemispheres 154.2
2165 Male, age 80, both hemispheres 116.7
2130 Female, age 85, both hemispheres 112.9
2794 Female, age 91, left hemisphere 99.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 134.2
2302 Female, age 91, both hemispheres 140.3
1986 Male, age 76, both hemispheres 138.8
2180 Male, age 61, both hemispheres 133.1
2118 Male, age 80, both hemispheres 129.3
2741 Female, age 85, both hemispheres 129.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 122.6
1959 Male, age 76, both hemispheres 132.9
2840 Female, age 85, both hemispheres 130.0
2456 Female, age 91, both hemispheres 122.5
2161 Male, age 80, both hemispheres 120.8
2449 Male, age 74, both hemispheres 116.4
2359 Male, age 61, both hemispheres 113.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 169.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 169.3
FF:10182-103D2 60 years, female 174.7
FF:10165-103B3 76 years, female 163.9
Medulla oblongata
Scaled Tags Per Million: 134.6
FF:10155-103A2 76 years, female 153.7
FF:10038-101F2 18-64 years, mixed 135.2
FF:10174-103C3 60 years, female 114.9
Pons
Scaled Tags Per Million: 144.6
FF:10033-101E6 18-54 years, mixed 144.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 245.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 241.1
Samples: 4

Max nTPM: 273.6
Min nTPM: 222.3
Sample A Female 273.6
Sample B Female 222.3
Sample C Male 236.3
Sample D Male 232.2
Pons
nTPM: 245.5
Samples: 4

Max nTPM: 287.5
Min nTPM: 211.0
Sample A Female 287.5
Sample B Female 211.0
Sample C Male 243.9
Sample D Male 239.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 33.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 33.6
Samples: 4

Max nTPM: 35.0
Min nTPM: 31.5
Sample A Male 34.1
Sample B Male 35.0
Sample C Female 31.5
Sample D Female 33.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.4
68162273 Antisense, RP_041122_02_G07, Mouse strain C57BL/6J (56 days, male) 2.4
Pons
Expression energy: 3.1
68162273 Antisense, RP_041122_02_G07, Mouse strain C57BL/6J (56 days, male) 3.1

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