HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:61.3 nTPM
HPA Brain:59.0 nTPM
GTEx:61.3 nTPM
FANTOM5:61.1 Scaled Tags Per Million
Pig:67.5 nTPM
Mouse:94.1 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048963Antibody CAB020697
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 59.0
Sample id Sample description nTPM
Hippocampus
nTPM: 47.0
1855 Male, age 76, left hemisphere 57.5
1898 Male, age 80, left hemisphere 55.8
1911 Female, age 85, right hemisphere 51.0
2148 Female, age 91, left hemisphere 45.0
2621 Female, age 67, right hemisphere 38.2
2529 Female, age 94, left hemisphere 34.3
Dentate gyrus
nTPM: 52.1
1927 Female, age 91, both hemispheres 68.6
2010 Male, age 76, both hemispheres 67.5
2528 Male, age 74, both hemispheres 53.7
2246 Female, age 85, both hemispheres 44.9
2530 Female, age 94, left hemisphere 40.7
2531 Female, age 67, both hemispheres 37.4
Entorhinal gyrus
nTPM: 54.3
2686 Male, age 75, right hemisphere 73.4
1787 Male, age 76, left hemisphere 59.3
2613 Female, age 94, left hemisphere 52.3
1938 Female, age 85, left hemisphere 50.9
2764 Male, age 80, right hemisphere 49.6
2117 Female, age 91, right hemisphere 40.6
Hippocampus, CA1
nTPM: 56.6
2749 Male, age 80, left hemisphere 64.4
2045 Male, age 76, both hemispheres 62.8
1873 Female, age 85, both hemispheres 59.6
2527 Male, age 74, both hemispheres 48.9
2082 Female, age 91, right hemisphere 47.3
Hippocampus, CA2
nTPM: 57.1
1892 Male, age 76, both hemispheres 74.2
2249 Male, age 74, both hemispheres 59.8
1940 Female, age 85, left hemisphere 57.8
1963 Male, age 80, left hemisphere 57.8
2437 Female, age 94, left hemisphere 49.8
2113 Female, age 91, right hemisphere 42.9
Hippocampus, CA3
nTPM: 57.2
2436 Male, age 74, both hemispheres 80.1
1867 Male, age 76, both hemispheres 75.7
2137 Male, age 80, left hemisphere 64.2
1891 Female, age 85, both hemispheres 49.3
2861 Female, age 67, both hemispheres 37.2
2620 Female, age 94, left hemisphere 36.6
Parahippocampal cortex
nTPM: 52.6
2693 Female, age 94, both hemispheres 67.7
1933 Female, age 85, both hemispheres 62.9
1850 Male, age 80, both hemispheres 56.6
1990 Female, age 91, right hemisphere 53.3
2245 Female, age 91, both hemispheres 53.2
2250 Female, age 67, right hemisphere 53.0
2018 Male, age 76, both hemispheres 50.7
2532 Female, age 72, left hemisphere 48.7
2622 Female, age 67, right hemisphere 47.0
2692 Male, age 74, both hemispheres 32.7
Perirhinal gyrus
nTPM: 59.0
1841 Female, age 85, right hemisphere 68.4
2848 Male, age 76, right hemisphere 59.1
1847 Female, age 91, left hemisphere 58.3
2521 Female, age 94, right hemisphere 58.0
1794 Male, age 80, right hemisphere 51.4
Subiculum
nTPM: 47.9
2042 Male, age 76, both hemispheres 62.4
1977 Female, age 85, both hemispheres 52.3
1901 Male, age 80, both hemispheres 48.6
2729 Female, age 91, right hemisphere 43.9
2438 Female, age 94, left hemisphere 41.4
2619 Male, age 74, both hemispheres 38.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 61.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.3
Samples: 197

Max nTPM: 153.3
Min nTPM: 20.1
Std nTPM: 20.5
Median nTPM: 57.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 153.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 145.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 124.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 117.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 115.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 114.6
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 112.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 111.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 107.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 102.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 101.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 61.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.1
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 44.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 67.5
Pig sample Sample description nTPM
Subiculum
nTPM: 52.4
Samples: 4

Max nTPM: 64.7
Min nTPM: 41.8
Sample A Female 52.8
Sample B Female 41.8
Sample C Male 50.1
Sample D Male 64.7
Dorsal hippocampus
nTPM: 67.6
Samples: 4

Max nTPM: 88.0
Min nTPM: 49.1
Sample A Female 88.0
Sample B Female 68.9
Sample C Male 64.2
Sample D Male 49.1
Entorhinal cortex
nTPM: 53.3
Samples: 4

Max nTPM: 64.1
Min nTPM: 38.7
Sample A Female 58.2
Sample B Female 64.1
Sample C Male 52.3
Sample D Male 38.7
Ventral hippocampus
nTPM: 59.8
Samples: 4

Max nTPM: 70.3
Min nTPM: 44.6
Sample A Female 70.3
Sample B Female 44.6
Sample C Male 59.3
Sample D Male 65.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 94.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.0
Samples: 4

Max nTPM: 92.9
Min nTPM: 86.3
Sample A Male 92.9
Sample B Male 90.9
Sample C Female 86.3
Sample D Female 89.9
Hippocampal formation
nTPM: 94.1
Samples: 4

Max nTPM: 99.0
Min nTPM: 89.6
Sample A Male 93.8
Sample B Male 89.6
Sample C Female 99.0
Sample D Female 94.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
69526952 Antisense, RP_050421_02_A03, Mouse strain C57BL/6J (56 days, male) 3.7

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