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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:31.9 nTPM
HPA Brain:58.9 nTPM
GTEx:31.9 nTPM
FANTOM5:107.4 Scaled Tags Per Million
Pig:125.6 nTPM
Mouse:285.2 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041942Antibody HPA044198
Glial cells Not detectedNot detected
Neuronal cells LowLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 50.9
2846 Female, age 79, unknown 60.1
2290 Female, age 72, unknown 55.7
1781 Male, age 74, unknown 55.0
1854 Male, age 80, left hemisphere 50.6
1857 Female, age 85, left hemisphere 48.8
2288 Male, age 75, left hemisphere 48.0
2289 Male, age 61, right hemisphere 47.5
2481 Female, age 94, left hemisphere 41.3
Globus pallidus, externus
nTPM: 21.1
2772 Female, age 79, unknown 32.5
2395 Male, age 75, both hemispheres 22.6
2646 Male, age 61, right hemisphere 18.5
1996 Male, age 80, right hemisphere 18.4
2567 Female, age 72, unknown 13.7
Globus pallidus, internus
nTPM: 21.0
2483 Female, age 94, right hemisphere 40.3
1818 Male, age 74, unknown 28.3
2287 Male, age 75, right hemisphere 24.0
2037 Male, age 80, right hemisphere 16.9
2566 Female, age 72, unknown 15.2
2778 Female, age 91, both hemispheres 12.8
2111 Female, age 85, right hemisphere 9.4
Nucleus accumbens
nTPM: 47.7
1856 Female, age 91, right hemisphere 78.1
2824 Male, age 61, right hemisphere 62.8
1783 Male, age 74, unknown 53.6
2286 Male, age 75, left hemisphere 48.7
1806 Female, age 85, left hemisphere 46.6
2698 Female, age 72, unknown 34.4
2732 Male, age 80, right hemisphere 30.3
2391 Female, age 94, left hemisphere 27.4
Nucleus basalis of Meynert
nTPM: 41.6
2484 Female, age 94, left hemisphere 58.0
2393 Male, age 80, right hemisphere 52.8
2821 Male, age 75, both hemispheres 34.5
2569 Male, age 61, both hemispheres 21.1
Nucleus of the diagonal band
nTPM: 54.7
1812 Female, age 91, both hemispheres 64.0
2775 Male, age 80, right hemisphere 60.8
2029 Male, age 61, right hemisphere 59.5
1979 Male, age 74, unknown 45.3
2195 Female, age 85, both hemispheres 43.9
Putamen
nTPM: 58.9
2466 Female, age 79, unknown 75.0
1937 Female, age 91, right hemisphere 68.5
1829 Male, age 74, unknown 67.8
1838 Male, age 80, right hemisphere 64.8
2489 Female, age 72, unknown 51.4
2647 Male, age 75, left hemisphere 44.8
2482 Female, age 94, left hemisphere 40.1
Septal nuclei
nTPM: 47.5
2031 Female, age 72, unknown 62.0
2009 Female, age 91, both hemispheres 59.2
1960 Male, age 74, unknown 54.5
2629 Female, age 94, right hemisphere 47.7
2199 Male, age 80, right hemisphere 39.0
2394 Male, age 61, left hemisphere 35.5
2059 Female, age 85, both hemispheres 34.7
Stria terminalis, bed nucleus
nTPM: 56.0
1974 Female, age 91, both hemispheres 64.9
2486 Female, age 94, both hemispheres 63.9
2201 Male, age 74, unknown 39.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 30.8
Samples: 246

Max nTPM: 70.2
Min nTPM: 11.3
Std nTPM: 11.4
Median nTPM: 29.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 59.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 58.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 54.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 54.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 54.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 53.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 52.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 52.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 50.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 50.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 50.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 50.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 48.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 47.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 47.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 46.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 45.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 45.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 45.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 45.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 44.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 44.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 44.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 44.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 43.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 43.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 43.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 43.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 43.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 43.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 42.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 42.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 42.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 40.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 40.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 40.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 40.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 39.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 39.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 39.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 39.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 38.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 38.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 38.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 38.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 38.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 38.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 38.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 38.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 38.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 38.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 37.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 37.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 37.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 37.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 37.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 37.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 36.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 36.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 36.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 36.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 36.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 36.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 36.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 36.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 35.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 35.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 35.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 35.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 35.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 35.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 35.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 34.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 34.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 33.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 33.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 33.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 33.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 33.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 33.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 33.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 33.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 32.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 32.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 32.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 32.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 32.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 32.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 32.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 31.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 31.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 31.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 31.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 31.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 31.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 31.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 30.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 30.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 30.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 30.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 30.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 30.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 30.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 30.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 29.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 29.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 29.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 29.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 29.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 29.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 28.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 28.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 28.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 28.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 28.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 28.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 28.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 28.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 27.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 27.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 27.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 27.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 27.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 27.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 27.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 27.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 27.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 27.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 27.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 27.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 27.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 26.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 26.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 26.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 25.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 25.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 24.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 24.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 24.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 24.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 24.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 24.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 24.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 24.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 23.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 23.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 23.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 23.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 22.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 22.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 22.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 22.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 22.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 22.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 22.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 22.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 21.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 21.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 21.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 21.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 21.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 21.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 21.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 21.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 21.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 21.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 21.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 21.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 21.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 20.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 20.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 20.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 20.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 20.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 20.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 20.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 20.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 19.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 19.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 19.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 19.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 19.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 19.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 19.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 18.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 18.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 18.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 18.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 18.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 18.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 18.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 17.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 17.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 17.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 17.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 17.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 16.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 16.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 16.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 16.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 16.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 16.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 16.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 16.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 16.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 16.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 16.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 16.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 16.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 15.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 15.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 15.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 15.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 15.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 14.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 14.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 13.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 13.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 13.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 31.9
Samples: 246

Max nTPM: 55.4
Min nTPM: 8.7
Std nTPM: 9.1
Median nTPM: 32.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 55.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 55.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 55.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 53.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 52.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 52.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 52.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 51.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 49.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 49.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 48.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 46.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 46.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 45.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 44.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 44.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 44.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 44.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 44.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 43.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 43.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 43.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 43.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 43.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 43.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 42.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 42.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 42.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 42.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 41.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 41.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 41.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 41.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 41.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 41.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 41.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 41.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 41.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 41.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 41.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 40.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 40.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 40.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 40.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 40.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 40.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 40.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 40.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 40.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 40.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 39.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 39.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 39.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 39.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 39.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 39.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 39.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 39.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 38.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 38.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 38.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 38.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 38.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 37.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 37.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 37.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 37.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 37.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 37.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 36.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 36.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 36.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 36.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 36.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 36.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 36.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 36.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 35.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 35.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 35.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 35.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 35.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 35.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 35.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 35.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 35.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 35.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 34.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 34.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 34.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 34.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 34.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 34.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 34.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 34.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 34.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 34.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 33.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 33.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 33.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 33.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 33.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 33.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 33.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 33.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 33.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 33.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 33.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 33.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 33.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 33.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 32.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 32.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 32.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 32.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 32.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 32.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 32.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 32.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 32.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 31.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 31.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 31.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 31.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 31.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 31.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 31.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 31.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 31.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 31.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 31.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 30.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 30.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 30.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 30.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 30.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 30.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 30.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 30.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 30.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 30.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 30.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 30.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 29.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 29.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 29.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 29.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 29.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 29.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 29.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 29.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 29.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 29.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 29.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 28.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 28.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 28.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 28.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 28.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 28.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 28.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 28.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 28.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 27.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 27.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 27.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 27.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 27.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 27.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 27.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 26.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 26.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 26.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 26.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 26.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 26.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 25.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 25.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 25.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 25.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 25.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 24.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 24.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 24.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 24.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 23.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 23.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 23.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 23.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 23.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 23.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 23.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 23.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 22.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 22.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 22.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 22.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 21.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 21.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 21.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 21.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 21.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 21.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 21.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 21.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 21.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 20.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 20.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 20.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 20.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 19.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 19.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 19.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 19.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 18.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 18.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 18.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 18.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 18.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 18.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 17.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 17.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 17.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 17.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 17.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 17.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 17.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 17.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 17.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 16.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 16.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 16.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 16.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 12.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 10.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 8.7
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Brain - Putamen (basal ganglia)
Average nTPM: 31.0
Samples: 205

Max nTPM: 80.4
Min nTPM: 8.1
Std nTPM: 11.9
Median nTPM: 30.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 80.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 64.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 63.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 57.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 53.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 53.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 52.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 52.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 50.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 50.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 50.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 48.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 48.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 47.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 47.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 47.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 47.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 46.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 46.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 46.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 45.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 45.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 44.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 44.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 44.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 44.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 43.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 42.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 42.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 42.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 42.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 42.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 42.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 41.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 41.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 41.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 41.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 40.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 40.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 40.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 39.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 39.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 39.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 38.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 38.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 38.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 38.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 37.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 36.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 36.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 36.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 36.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 36.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 36.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 36.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 36.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 35.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 35.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 35.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 35.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 35.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 35.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 35.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 35.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 34.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 34.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 34.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 34.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 34.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 34.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 34.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 33.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 33.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 33.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 32.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 32.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 32.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 32.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 32.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 32.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 32.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 32.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 31.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 31.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 31.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 31.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 31.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 31.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 31.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 31.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 31.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 30.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 30.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 30.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 30.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 30.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 29.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 29.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 29.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 29.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 29.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 29.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 29.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 28.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 28.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 28.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 28.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 28.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 28.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 28.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 28.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 27.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 27.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 26.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 26.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 26.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 26.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 26.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 26.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 26.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 25.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 25.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 25.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 25.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 25.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 25.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 25.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 25.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 24.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 24.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 24.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 24.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 23.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 23.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 23.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 22.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 22.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 22.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 22.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 21.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 21.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 21.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 21.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 21.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 21.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 21.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 21.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 21.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 20.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 20.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 19.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 18.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 18.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 18.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 17.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 17.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 17.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 17.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 17.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 17.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 17.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 17.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 16.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 16.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 16.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 16.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 16.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 15.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 15.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 15.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 15.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 15.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 14.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 14.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 14.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 14.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 14.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 13.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 13.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 13.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

107.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 107.4
FF:10164-103B2 76 years, female 107.4
Nucleus accumbens
Scaled Tags Per Million: 90.1
FF:10037-101F1 23-56 years, mixed 90.1
Putamen
Scaled Tags Per Million: 95.1
FF:10176-103C5 60 years, female 95.1
Globus pallidus
Scaled Tags Per Million: 69.0
FF:10175-103C4 60 years, female 106.7
FF:10161-103A8 76 years, female 31.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.6
Pig sample Sample description nTPM
Caudate
nTPM: 110.2
Samples: 4

Max nTPM: 132.7
Min nTPM: 84.4
Sample A Female 84.4
Sample B Female 103.5
Sample C Male 132.7
Sample D Male 120.2
Putamen
nTPM: 125.6
Samples: 4

Max nTPM: 201.1
Min nTPM: 49.6
Sample A Female 49.6
Sample B Female 125.4
Sample C Male 201.1
Sample D Male 126.3
Septum
nTPM: 56.0
Samples: 4

Max nTPM: 67.2
Min nTPM: 38.3
Sample A Female 67.2
Sample B Female 65.9
Sample C Male 52.5
Sample D Male 38.3
Ventral pallidum
nTPM: 75.2
Samples: 4

Max nTPM: 86.5
Min nTPM: 57.1
Sample A Female 80.2
Sample B Female 86.5
Sample C Male 57.1
Sample D Male 76.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 285.2
Samples: 4

Max nTPM: 313.1
Min nTPM: 254.0
Sample A Male 308.4
Sample B Male 313.1
Sample C Female 254.0
Sample D Female 265.1
Septum
nTPM: 114.2
Samples: 4

Max nTPM: 124.1
Min nTPM: 105.7
Sample A Male 124.1
Sample B Male 111.0
Sample C Female 115.8
Sample D Female 105.7
Ventral forebrain
nTPM: 200.0
Samples: 4

Max nTPM: 223.9
Min nTPM: 190.3
Sample A Male 190.3
Sample B Male 193.2
Sample C Female 223.9
Sample D Female 192.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.9
1457 Antisense, RP_040428_01_G03, Mouse strain C57BL/6J (56 days, male) 7.9
1456 Antisense, RP_040428_01_G03, Mouse strain C57BL/6J (56 days, male) 5.9
Pallidum
Expression energy: 2.4
1457 Antisense, RP_040428_01_G03, Mouse strain C57BL/6J (56 days, male) 2.4
1456 Antisense, RP_040428_01_G03, Mouse strain C57BL/6J (56 days, male) 1.2

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