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PTPN3
HPA
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  • PTPN3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PTPN3
Synonyms PTPH1
Gene descriptioni

Full gene name according to HGNC.

Protein tyrosine phosphatase non-receptor type 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband q31.3
Chromosome location (bp) 109375466 - 109498313
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000070159 (version 109)
Entrez gene 5774
HGNC HGNC:9655
UniProt P26045 (UniProt - Evidence at protein level)
neXtProt NX_P26045
GeneCards PTPN3
Antibodypedia PTPN3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May act at junctions between the membrane and the cytoskeleton. Possesses tyrosine phosphatase activity.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Protein phosphatase
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This protein contains a C-terminal PTP domain and an N-terminal domain homologous to the band 4.1 superfamily of cytoskeletal-associated proteins. P97, a cell cycle regulator involved in a variety of membrane related functions, has been shown to be a substrate of this PTP. This PTP was also found to interact with, and be regulated by adaptor protein 14-3-3 beta. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PTPN3-201
ENSP00000262539
ENST00000262539
J3KN34
[Direct mapping] Tyrosine-protein phosphatase non-receptor type
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0006470 [protein dephosphorylation]
GO:0008092 [cytoskeletal protein binding]
GO:0016311 [dephosphorylation]
GO:0016787 [hydrolase activity]
Show all
839 aa
95.3 kDa
No 0
PTPN3-202
ENSP00000363667
ENST00000374541
P26045
[Direct mapping] Tyrosine-protein phosphatase non-receptor type 3
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006470 [protein dephosphorylation]
GO:0008092 [cytoskeletal protein binding]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0016020 [membrane]
GO:0016311 [dephosphorylation]
GO:0016787 [hydrolase activity]
GO:0016791 [phosphatase activity]
GO:0017080 [sodium channel regulator activity]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0045930 [negative regulation of mitotic cell cycle]
GO:0051045 [negative regulation of membrane protein ectodomain proteolysis]
GO:0051117 [ATPase binding]
GO:0097421 [liver regeneration]
GO:0098902 [regulation of membrane depolarization during action potential]
GO:2000649 [regulation of sodium ion transmembrane transporter activity]
Show all
913 aa
104 kDa
No 0
PTPN3-203
ENSP00000416654
ENST00000412145
P26045
[Direct mapping] Tyrosine-protein phosphatase non-receptor type 3
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006470 [protein dephosphorylation]
GO:0008092 [cytoskeletal protein binding]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0016020 [membrane]
GO:0016311 [dephosphorylation]
GO:0016787 [hydrolase activity]
GO:0016791 [phosphatase activity]
GO:0017080 [sodium channel regulator activity]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0045930 [negative regulation of mitotic cell cycle]
GO:0051045 [negative regulation of membrane protein ectodomain proteolysis]
GO:0051117 [ATPase binding]
GO:0098902 [regulation of membrane depolarization during action potential]
GO:2000649 [regulation of sodium ion transmembrane transporter activity]
Show all
782 aa
88.8 kDa
No 0
PTPN3-204
ENSP00000395384
ENST00000446349
P26045
[Direct mapping] Tyrosine-protein phosphatase non-receptor type 3
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006470 [protein dephosphorylation]
GO:0008092 [cytoskeletal protein binding]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0016020 [membrane]
GO:0016311 [dephosphorylation]
GO:0016787 [hydrolase activity]
GO:0016791 [phosphatase activity]
GO:0017080 [sodium channel regulator activity]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0045930 [negative regulation of mitotic cell cycle]
GO:0051045 [negative regulation of membrane protein ectodomain proteolysis]
GO:0051117 [ATPase binding]
GO:0098902 [regulation of membrane depolarization during action potential]
GO:2000649 [regulation of sodium ion transmembrane transporter activity]
Show all
737 aa
83.7 kDa
No 0

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