PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:363.5 nTPM
FANTOM5:398.6 Scaled Tags Per Million
Pig:207.5 nTPM
Mouse:120.6 nTPM
Allen mouse:3.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 363.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 224.5
2090 Male, age 80, both hemispheres 269.5
2188 Female, age 91, both hemispheres 246.1
2301 Female, age 85, both hemispheres 227.1
1984 Male, age 76, both hemispheres 155.3
Area postrema
nTPM: 252.3
2306 Male, age 80, both hemispheres 364.2
2799 Male, age 61, both hemispheres 238.8
2054 Male, age 76, both hemispheres 153.9
Dorsal cochlear nucleus
nTPM: 225.7
2378 Male, age 80, both hemispheres 278.1
2802 Male, age 74, right hemisphere 236.2
2187 Female, age 91, both hemispheres 219.3
2058 Male, age 76, both hemispheres 200.5
2370 Male, age 61, both hemispheres 194.6
Dorsal medullary reticular nucleus
nTPM: 229.1
2040 Female, age 85, both hemispheres 238.4
2373 Male, age 61, both hemispheres 234.0
2088 Male, age 76, both hemispheres 215.0
Dorsal motor vagal complex
nTPM: 173.3
2185 Male, age 76, both hemispheres 251.3
2000 Male, age 74, unknown 196.5
2133 Female, age 91, both hemispheres 184.3
2797 Male, age 61, both hemispheres 172.8
2807 Female, age 85, both hemispheres 162.7
2643 Male, age 74, both hemispheres 156.3
2813 Female, age 72, unknown 138.1
2844 Male, age 55, unknown 124.6
Dorsal tegmental nucleus
nTPM: 185.8
2083 Male, age 80, both hemispheres 267.6
2326 Male, age 74, both hemispheres 211.0
1936 Male, age 76, left hemisphere 159.2
2358 Male, age 61, both hemispheres 105.5
Dorsolateral tegmental area
nTPM: 209.6
2751 Female, age 85, both hemispheres 299.3
2654 Male, age 80, both hemispheres 264.3
2337 Male, age 61, both hemispheres 201.2
2360 Male, age 74, both hemispheres 167.3
2141 Male, age 76, both hemispheres 115.8
Gigantocellular reticular nuclei, medullary
nTPM: 247.8
2314 Male, age 61, both hemispheres 363.7
2387 Female, age 91, both hemispheres 286.0
1876 Female, age 85, both hemispheres 271.5
2022 Male, age 76, right hemisphere 207.7
2310 Male, age 80, both hemispheres 203.5
2462 Male, age 74, both hemispheres 154.4
Gigantocellular reticular nuclei, pars
nTPM: 200.8
2336 Male, age 61, both hemispheres 228.7
2706 Male, age 80, both hemispheres 223.7
2330 Male, age 80, both hemispheres 208.7
2084 Female, age 85, both hemispheres 193.4
2168 Male, age 76, both hemispheres 149.5
Inferior olive
nTPM: 279.6
2178 Male, age 61, both hemispheres 373.3
2379 Male, age 80, both hemispheres 267.9
2563 Male, age 74, both hemispheres 267.9
2085 Female, age 85, both hemispheres 262.4
2628 Female, age 91, both hemispheres 226.5
Kolliker-Fuse nucleus
nTPM: 211.5
2793 Female, age 91, left hemisphere 243.4
2315 Male, age 76, right hemisphere 209.0
2163 Male, age 80, both hemispheres 181.9
Lateral lemniscal nuclei
nTPM: 207.7
2036 Male, age 80, both hemispheres 240.3
2320 Female, age 91, left hemisphere 230.7
2746 Female, age 85, left hemisphere 209.8
2453 Male, age 74, right hemisphere 191.5
2169 Male, age 76, both hemispheres 166.3
Lateral medullary reticular nucleus
nTPM: 274.6
2852 Male, age 80, both hemispheres 340.8
2305 Male, age 74, both hemispheres 287.0
2374 Male, age 61, both hemispheres 284.4
2190 Female, age 85, both hemispheres 264.2
2804 Female, age 91, both hemispheres 238.7
2044 Male, age 76, both hemispheres 232.2
Lateral parabrachial nucleus
nTPM: 246.3
2792 Male, age 76, both hemispheres 337.2
2013 Male, age 80, both hemispheres 271.4
2790 Male, age 61, both hemispheres 193.1
2139 Female, age 85, right hemisphere 183.7
Lateral vestibular nucleus
nTPM: 189.3
2311 Male, age 80, both hemispheres 208.7
2184 Male, age 76, both hemispheres 170.0
Locus coeruleus
nTPM: 127.1
2162 Male, age 80, both hemispheres 152.1
2317 Female, age 72, unknown 144.4
2720 Male, age 74, both hemispheres 133.6
2788 Male, age 74, unknown 128.6
2123 Female, age 91, both hemispheres 125.2
2014 Male, age 55, unknown 116.8
1980 Male, age 76, both hemispheres 89.0
Medial olivary nucleus
nTPM: 360.9
1943 Male, age 61, both hemispheres 478.4
1962 Male, age 76, both hemispheres 422.1
2138 Female, age 91, both hemispheres 272.0
2851 Male, age 80, both hemispheres 271.3
Medial parabrachial nucleus
nTPM: 204.2
2463 Female, age 85, right hemisphere 238.7
2170 Female, age 91, both hemispheres 223.9
2854 Male, age 80, both hemispheres 211.5
2786 Male, age 76, both hemispheres 190.8
2156 Male, age 61, both hemispheres 155.8
Medial periolivary nuclei
nTPM: 200.3
2081 Male, age 80, both hemispheres 256.7
2791 Male, age 74, right hemisphere 231.3
2458 Female, age 91, both hemispheres 202.1
2063 Male, age 76, both hemispheres 182.6
2171 Female, age 85, both hemispheres 128.8
Medial vestibular nucleus
nTPM: 202.6
2803 Female, age 91, both hemispheres 253.0
2093 Male, age 80, both hemispheres 248.6
2801 Male, age 74, both hemispheres 240.5
2624 Male, age 61, both hemispheres 197.0
2743 Female, age 85, both hemispheres 162.4
2134 Male, age 76, both hemispheres 113.9
Motor facial nucleus
nTPM: 206.5
2126 Male, age 61, both hemispheres 259.8
2365 Male, age 74, right hemisphere 230.1
2697 Female, age 85, both hemispheres 211.1
2795 Female, age 91, both hemispheres 199.0
2327 Male, age 80, both hemispheres 189.6
2062 Male, age 76, both hemispheres 149.6
Motor hypoglossal nucleus
nTPM: 207.6
2132 Female, age 85, both hemispheres 272.9
2125 Female, age 91, both hemispheres 263.8
2182 Male, age 80, both hemispheres 257.4
2461 Male, age 61, both hemispheres 125.9
2277 Male, age 76, both hemispheres 117.8
Motor trigeminal nucleus
nTPM: 196.3
2560 Male, age 74, both hemispheres 241.8
2321 Female, age 91, both hemispheres 213.7
2309 Male, age 76, both hemispheres 194.3
2079 Male, age 80, both hemispheres 176.2
2335 Male, age 61, both hemispheres 155.3
Nuclei of the trapezoid body
nTPM: 185.8
2368 Female, age 91, both hemispheres 218.9
2166 Male, age 80, both hemispheres 218.4
2159 Male, age 61, both hemispheres 188.3
1983 Male, age 76, both hemispheres 184.8
2735 Female, age 85, both hemispheres 118.6
Nucleus ambiguus
nTPM: 265.7
2071 Male, age 76, both hemispheres 376.5
2096 Female, age 85, both hemispheres 154.9
Nucleus cuneatus
nTPM: 259.9
2380 Male, age 80, both hemispheres 376.3
2381 Male, age 80, both hemispheres 309.8
2808 Female, age 85, both hemispheres 309.3
2376 Male, age 61, both hemispheres 286.6
2100 Male, age 76, both hemispheres 252.3
2564 Male, age 74, both hemispheres 223.3
2131 Male, age 76, both hemispheres 202.0
2805 Female, age 91, both hemispheres 196.2
2562 Male, age 61, both hemispheres 183.3
Nucleus gracilis
nTPM: 316.0
2382 Male, age 80, both hemispheres 430.0
2299 Female, age 85, both hemispheres 269.6
2627 Male, age 74, both hemispheres 248.5
Nucleus raphe magnus
nTPM: 181.8
2459 Female, age 91, both hemispheres 235.1
2328 Male, age 80, both hemispheres 230.8
2051 Male, age 76, both hemispheres 221.3
2455 Male, age 74, both hemispheres 176.9
2160 Male, age 61, both hemispheres 121.8
2172 Female, age 85, both hemispheres 105.2
Nucleus raphe obscurus
nTPM: 363.5
2142 Male, age 76, midline 397.9
2845 Female, age 85, midline 371.1
2800 Male, age 61, midline 321.5
Nucleus raphe pallidus
nTPM: 345.7
1924 Male, age 61, midline 404.0
2145 Male, age 76, midline 398.7
2183 Male, age 80, midline 234.3
Nucleus tractus solitarii
nTPM: 131.8
2144 Female, age 91, right hemisphere 158.6
2656 Male, age 76, both hemispheres 133.0
2307 Male, age 80, both hemispheres 118.1
2191 Female, age 85, both hemispheres 117.4
Paramedian reticular nucleus
nTPM: 230.3
2052 Male, age 76, both hemispheres 277.2
2057 Male, age 80, both hemispheres 236.9
2050 Female, age 85, both hemispheres 207.3
2313 Male, age 61, both hemispheres 199.9
Parvicellular reticular nuclei
nTPM: 211.7
2095 Male, age 76, both hemispheres 229.2
2119 Male, age 80, both hemispheres 229.0
2558 Male, age 74, both hemispheres 176.9
Parvicellular reticular nuclei, medullary
nTPM: 198.7
2091 Female, age 85, both hemispheres 203.9
2189 Female, age 91, both hemispheres 201.1
2181 Male, age 80, left hemisphere 191.0
Pedunculopontine tegmental nucleus
nTPM: 184.3
2334 Male, age 80, both hemispheres 204.9
1921 Female, age 85, both hemispheres 177.0
2338 Male, age 61, both hemispheres 170.8
Peritrigeminal nucleus
nTPM: 253.7
2067 Female, age 85, both hemispheres 268.3
2136 Male, age 76, both hemispheres 252.0
2179 Male, age 61, both hemispheres 240.9
Pontine nuclei
nTPM: 222.6
2454 Male, age 74, left hemisphere 306.9
2109 Female, age 72, unknown 262.1
2319 Female, age 91, both hemispheres 229.6
2115 Male, age 80, left hemisphere 226.3
1863 Male, age 55, unknown 212.2
1968 Male, age 76, left hemisphere 204.7
2727 Male, age 61, right hemisphere 190.8
2787 Female, age 85, both hemispheres 148.1
Pontine raphe nucleus
nTPM: 156.2
2853 Male, age 76, midline 158.9
2122 Female, age 85, midline 153.4
Posteroventral cochlear nucleus
nTPM: 251.0
2341 Male, age 80, both hemispheres 314.6
2070 Male, age 76, both hemispheres 272.7
2135 Female, age 91, both hemispheres 267.4
2371 Male, age 61, both hemispheres 225.4
2752 Female, age 85, both hemispheres 175.2
Prepositus hypoglossal nucleus
nTPM: 220.4
2855 Female, age 85, right hemisphere 264.4
2086 Male, age 80, both hemispheres 176.4
Principal sensory trigeminal nucleus
nTPM: 176.1
2367 Female, age 91, left hemisphere 238.7
2008 Male, age 80, left hemisphere 171.1
2324 Male, age 76, both hemispheres 162.0
2158 Male, age 61, both hemispheres 132.5
Reticular pontine nucleus, caudal
nTPM: 232.3
2559 Male, age 74, both hemispheres 266.2
2457 Female, age 91, both hemispheres 245.3
2092 Male, age 76, both hemispheres 245.0
2332 Male, age 80, right hemisphere 172.8
Reticular pontine nucleus, oral
nTPM: 248.0
2361 Male, age 74, both hemispheres 275.8
1939 Male, age 80, both hemispheres 269.3
2366 Female, age 91, both hemispheres 245.1
2012 Female, age 85, both hemispheres 226.2
2167 Male, age 76, both hemispheres 223.5
Reticulotegmental nucleus
nTPM: 179.5
2333 Male, age 80, both hemispheres 204.0
2452 Male, age 74, both hemispheres 202.4
2322 Female, age 91, both hemispheres 196.2
2325 Male, age 76, both hemispheres 115.3
Spinal trigeminal nucleus, caudal
nTPM: 233.2
2312 Male, age 61, both hemispheres 319.3
2308 Male, age 80, both hemispheres 238.9
2447 Male, age 76, both hemispheres 225.0
2390 Female, age 91, both hemispheres 201.1
2642 Male, age 74, both hemispheres 181.8
Spinal trigeminal nucleus, interpolar
nTPM: 187.5
2386 Female, age 85, both hemispheres 216.5
2033 Male, age 80, both hemispheres 208.1
2389 Female, age 91, both hemispheres 204.4
2066 Male, age 76, right hemisphere 159.7
2625 Male, age 61, both hemispheres 148.9
Spinal trigeminal nucleus, oral
nTPM: 189.2
1978 Male, age 76, both hemispheres 205.6
2164 Male, age 80, both hemispheres 201.7
2737 Female, age 85, both hemispheres 160.2
Spinal vestibular nucleus
nTPM: 236.2
2748 Male, age 76, both hemispheres 294.1
2806 Female, age 85, both hemispheres 260.2
2384 Male, age 74, both hemispheres 249.2
2186 Female, age 91, both hemispheres 235.9
2780 Male, age 80, both hemispheres 209.4
2796 Male, age 61, both hemispheres 168.4
Subcoeruleus area
nTPM: 202.8
2369 Female, age 85, left hemisphere 346.9
1958 Male, age 80, both hemispheres 189.8
2451 Male, age 74, both hemispheres 167.3
2089 Male, age 76, left hemisphere 165.4
2323 Female, age 91, left hemisphere 144.6
Superior olive
nTPM: 224.6
2020 Male, age 76, both hemispheres 264.2
2329 Male, age 80, right hemisphere 242.3
2364 Male, age 74, right hemisphere 237.5
1875 Female, age 85, both hemispheres 190.1
2561 Female, age 91, both hemispheres 189.1
Superior vestibular nucleus
nTPM: 194.0
2015 Male, age 80, both hemispheres 222.1
2383 Male, age 74, both hemispheres 186.5
2061 Male, age 76, both hemispheres 173.5
Ventral medullary reticular nucleus
nTPM: 302.8
2372 Male, age 61, both hemispheres 334.3
2060 Male, age 76, both hemispheres 271.4
Ventral periolivary nuclei
nTPM: 190.2
2023 Male, age 76, both hemispheres 314.3
2165 Male, age 80, both hemispheres 180.1
2794 Female, age 91, left hemisphere 143.2
2130 Female, age 85, both hemispheres 123.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 250.2
2180 Male, age 61, both hemispheres 296.0
2118 Male, age 80, both hemispheres 293.8
1986 Male, age 76, both hemispheres 246.4
2741 Female, age 85, both hemispheres 208.9
2302 Female, age 91, both hemispheres 205.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 219.9
2456 Female, age 91, both hemispheres 244.1
2840 Female, age 85, both hemispheres 231.4
2359 Male, age 61, both hemispheres 221.2
2161 Male, age 80, both hemispheres 218.4
1959 Male, age 76, both hemispheres 210.6
2449 Male, age 74, both hemispheres 193.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 398.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 398.6
FF:10165-103B3 76 years, female 446.8
FF:10182-103D2 60 years, female 350.4
Medulla oblongata
Scaled Tags Per Million: 375.7
FF:10038-101F2 18-64 years, mixed 413.0
FF:10155-103A2 76 years, female 400.1
FF:10174-103C3 60 years, female 313.9
Pons
Scaled Tags Per Million: 303.9
FF:10033-101E6 18-54 years, mixed 303.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 207.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 207.5
Samples: 4

Max nTPM: 247.0
Min nTPM: 159.9
Sample A Female 224.2
Sample B Female 159.9
Sample C Male 198.8
Sample D Male 247.0
Pons
nTPM: 142.4
Samples: 4

Max nTPM: 174.9
Min nTPM: 117.0
Sample A Female 117.0
Sample B Female 128.2
Sample C Male 149.6
Sample D Male 174.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 120.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 120.6
Samples: 4

Max nTPM: 135.6
Min nTPM: 108.8
Sample A Male 108.8
Sample B Male 115.5
Sample C Female 122.6
Sample D Female 135.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.4
77925099 Antisense, RP_070320_02_C03, Mouse strain C57BL/6J (56 days, male) 7.5
68499189 Antisense, RP_050118_01_B02, Mouse strain C57BL/6J (56 days, male) 2.7
74749271 Antisense, RP_051219_01_B09, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 3.2
77925099 Antisense, RP_070320_02_C03, Mouse strain C57BL/6J (56 days, male) 7.5
68499189 Antisense, RP_050118_01_B02, Mouse strain C57BL/6J (56 days, male) 2.2
74749271 Antisense, RP_051219_01_B09, Mouse strain C57BL/6J (56 days, male) 0.1

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