HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:43.1 nTPM
HPA Brain:52.8 nTPM
GTEx:43.1 nTPM
FANTOM5:72.3 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:38.5 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024026
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.2
1898 Male, age 80, left hemisphere 55.1
2148 Female, age 91, left hemisphere 50.3
2621 Female, age 67, right hemisphere 50.1
2529 Female, age 94, left hemisphere 48.9
1855 Male, age 76, left hemisphere 43.4
1911 Female, age 85, right hemisphere 41.7
Dentate gyrus
nTPM: 47.0
2530 Female, age 94, left hemisphere 54.6
1927 Female, age 91, both hemispheres 52.4
2528 Male, age 74, both hemispheres 46.5
2531 Female, age 67, both hemispheres 43.7
2010 Male, age 76, both hemispheres 43.3
2246 Female, age 85, both hemispheres 41.3
Entorhinal gyrus
nTPM: 50.0
2764 Male, age 80, right hemisphere 56.7
2613 Female, age 94, left hemisphere 53.6
2686 Male, age 75, right hemisphere 51.2
1787 Male, age 76, left hemisphere 48.6
2117 Female, age 91, right hemisphere 45.2
1938 Female, age 85, left hemisphere 44.7
Hippocampus, CA1
nTPM: 48.4
2749 Male, age 80, left hemisphere 70.8
2527 Male, age 74, both hemispheres 49.3
1873 Female, age 85, both hemispheres 44.2
2082 Female, age 91, right hemisphere 40.7
2045 Male, age 76, both hemispheres 37.1
Hippocampus, CA2
nTPM: 49.5
1963 Male, age 80, left hemisphere 59.3
2437 Female, age 94, left hemisphere 55.5
1892 Male, age 76, both hemispheres 51.3
2249 Male, age 74, both hemispheres 47.0
1940 Female, age 85, left hemisphere 42.5
2113 Female, age 91, right hemisphere 41.4
Hippocampus, CA3
nTPM: 52.8
2436 Male, age 74, both hemispheres 68.6
2861 Female, age 67, both hemispheres 56.1
2137 Male, age 80, left hemisphere 55.6
1867 Male, age 76, both hemispheres 49.0
2620 Female, age 94, left hemisphere 45.1
1891 Female, age 85, both hemispheres 42.3
Parahippocampal cortex
nTPM: 48.9
1990 Female, age 91, right hemisphere 53.6
2245 Female, age 91, both hemispheres 53.5
2622 Female, age 67, right hemisphere 52.6
2692 Male, age 74, both hemispheres 50.5
1850 Male, age 80, both hemispheres 48.7
2532 Female, age 72, left hemisphere 48.7
2250 Female, age 67, right hemisphere 48.1
1933 Female, age 85, both hemispheres 48.0
2693 Female, age 94, both hemispheres 45.6
2018 Male, age 76, both hemispheres 39.2
Perirhinal gyrus
nTPM: 51.5
1847 Female, age 91, left hemisphere 58.1
1794 Male, age 80, right hemisphere 54.6
2521 Female, age 94, right hemisphere 52.9
1841 Female, age 85, right hemisphere 46.2
2848 Male, age 76, right hemisphere 45.6
Subiculum
nTPM: 46.8
2619 Male, age 74, both hemispheres 53.8
2438 Female, age 94, left hemisphere 52.3
1977 Female, age 85, both hemispheres 48.4
1901 Male, age 80, both hemispheres 47.4
2729 Female, age 91, right hemisphere 43.1
2042 Male, age 76, both hemispheres 36.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.1
Samples: 197

Max nTPM: 65.3
Min nTPM: 22.0
Std nTPM: 8.0
Median nTPM: 42.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 65.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 63.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 60.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 60.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 59.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 58.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 58.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 57.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 57.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 72.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.3
FF:10169-103B7 60 years, female 75.8
FF:10153-102I9 76 years, female 68.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.0
Pig sample Sample description nTPM
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 21.4
Min nTPM: 15.0
Sample A Female 21.4
Sample B Female 15.0
Sample C Male 18.7
Sample D Male 16.2
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 18.9
Min nTPM: 13.0
Sample A Female 17.0
Sample B Female 15.2
Sample C Male 18.9
Sample D Male 13.0
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 19.6
Min nTPM: 18.0
Sample A Female 19.6
Sample B Female 19.3
Sample C Male 18.9
Sample D Male 18.0
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 23.9
Min nTPM: 13.1
Sample A Female 17.3
Sample B Female 13.1
Sample C Male 23.9
Sample D Male 17.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 38.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 42.2
Min nTPM: 31.9
Sample A Male 31.9
Sample B Male 35.9
Sample C Female 39.2
Sample D Female 42.2
Hippocampal formation
nTPM: 38.5
Samples: 4

Max nTPM: 41.4
Min nTPM: 36.0
Sample A Male 36.0
Sample B Male 38.7
Sample C Female 41.4
Sample D Female 38.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
70795835 Antisense, RP_050712_02_A11, Mouse strain C57BL/6J (56 days, male) 2.8
68844337 Antisense, RP_050222_01_D09, Mouse strain C57BL/6J (56 days, male) 2.6

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