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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:168.3 nTPM
HPA Brain:267.0 nTPM
GTEx:168.3 nTPM
FANTOM5:497.2 Scaled Tags Per Million
Pig:175.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045423Antibody CAB011536
Glial cells LowLow
Neuronal cells MediumNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

267.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 215.5
2846 Female, age 79, unknown 281.4
2289 Male, age 61, right hemisphere 260.9
2290 Female, age 72, unknown 232.5
1857 Female, age 85, left hemisphere 225.6
1781 Male, age 74, unknown 207.3
1854 Male, age 80, left hemisphere 187.3
2288 Male, age 75, left hemisphere 185.7
2481 Female, age 94, left hemisphere 143.4
Globus pallidus, externus
nTPM: 253.4
2646 Male, age 61, right hemisphere 313.9
2567 Female, age 72, unknown 294.2
2395 Male, age 75, both hemispheres 244.9
1996 Male, age 80, right hemisphere 239.5
2772 Female, age 79, unknown 174.8
Globus pallidus, internus
nTPM: 220.8
2566 Female, age 72, unknown 290.8
2037 Male, age 80, right hemisphere 230.6
1818 Male, age 74, unknown 221.3
2483 Female, age 94, right hemisphere 217.5
2111 Female, age 85, right hemisphere 205.0
2778 Female, age 91, both hemispheres 194.5
2287 Male, age 75, right hemisphere 185.7
Nucleus accumbens
nTPM: 203.7
2698 Female, age 72, unknown 339.2
1783 Male, age 74, unknown 228.5
1806 Female, age 85, left hemisphere 225.0
2732 Male, age 80, right hemisphere 218.1
2824 Male, age 61, right hemisphere 164.3
1856 Female, age 91, right hemisphere 156.0
2391 Female, age 94, left hemisphere 154.0
2286 Male, age 75, left hemisphere 144.4
Nucleus basalis of Meynert
nTPM: 267.0
2569 Male, age 61, both hemispheres 390.0
2821 Male, age 75, both hemispheres 271.9
2484 Female, age 94, left hemisphere 204.4
2393 Male, age 80, right hemisphere 201.7
Nucleus of the diagonal band
nTPM: 146.5
1812 Female, age 91, both hemispheres 164.6
2195 Female, age 85, both hemispheres 160.0
1979 Male, age 74, unknown 159.9
2775 Male, age 80, right hemisphere 130.0
2029 Male, age 61, right hemisphere 118.1
Putamen
nTPM: 207.7
2489 Female, age 72, unknown 285.1
2647 Male, age 75, left hemisphere 244.1
1829 Male, age 74, unknown 224.4
1838 Male, age 80, right hemisphere 223.0
2482 Female, age 94, left hemisphere 175.8
1937 Female, age 91, right hemisphere 163.1
2466 Female, age 79, unknown 138.2
Septal nuclei
nTPM: 167.8
2629 Female, age 94, right hemisphere 226.5
2199 Male, age 80, right hemisphere 193.1
2394 Male, age 61, left hemisphere 190.9
2059 Female, age 85, both hemispheres 182.4
1960 Male, age 74, unknown 130.1
2009 Female, age 91, both hemispheres 129.7
2031 Female, age 72, unknown 122.0
Stria terminalis, bed nucleus
nTPM: 138.0
2201 Male, age 74, unknown 161.3
1974 Female, age 91, both hemispheres 127.3
2486 Female, age 94, both hemispheres 125.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.1
Samples: 246

Max nTPM: 262.7
Min nTPM: 86.3
Std nTPM: 27.8
Median nTPM: 128.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 262.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 255.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 225.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 214.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 198.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 198.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 196.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 195.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 193.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 193.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 191.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 187.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 186.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 183.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 183.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 181.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 180.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 180.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 175.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 170.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 170.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 170.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 169.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 168.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 167.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 167.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 167.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 166.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 165.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 165.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 164.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 164.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 163.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 163.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 158.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 157.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 157.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 157.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 156.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 155.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 155.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 155.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 154.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 153.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 153.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 152.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 152.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 150.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 150.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 149.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 149.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 149.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 149.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 149.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 149.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 148.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 147.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 147.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 147.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 147.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 146.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 145.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 145.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 145.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 145.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 145.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 145.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 144.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 144.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 143.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 143.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 142.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 142.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 141.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 140.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 140.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 140.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 140.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 139.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 139.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 139.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 138.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 138.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 138.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 138.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 137.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 137.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 136.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 136.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 136.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 136.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 136.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 135.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 135.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 135.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 135.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 135.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 134.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 134.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 133.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 133.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 132.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 132.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 132.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 132.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 131.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 131.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 131.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 130.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 130.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 130.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 130.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 129.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 129.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 129.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 129.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 129.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 128.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 128.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 128.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 127.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 127.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 127.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 127.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 126.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 126.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 126.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 126.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 125.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 125.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 125.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 125.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 125.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 125.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 124.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 124.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 124.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 124.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 124.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 123.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 123.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 123.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 123.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 122.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 122.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 122.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 121.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 121.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 121.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 121.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 121.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 121.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 121.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 121.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 120.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 120.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 120.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 120.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 119.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 119.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 118.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 118.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 118.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 118.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 118.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 117.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 117.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 117.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 117.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 117.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 117.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 117.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 116.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 116.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 116.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 115.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 115.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 115.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 114.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 114.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 113.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 113.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 113.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 112.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 112.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 112.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 112.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 112.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 111.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 110.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 110.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 110.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 110.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 110.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 109.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 109.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 109.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 109.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 108.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 107.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 107.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 107.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 106.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 106.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 105.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 105.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 104.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 104.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 104.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 103.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 103.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 102.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 101.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 101.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 101.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 101.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 101.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 100.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 99.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 99.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 99.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 99.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 99.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 98.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 97.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 97.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 97.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 96.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 96.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 96.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 95.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 93.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 92.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 92.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 92.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 91.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 89.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 88.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 86.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 168.3
Samples: 246

Max nTPM: 305.3
Min nTPM: 67.1
Std nTPM: 36.5
Median nTPM: 163.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 305.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 278.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 278.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 276.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 258.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 256.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 246.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 243.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 240.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 235.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 235.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 232.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 230.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 230.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 230.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 229.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 229.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 229.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 226.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 225.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 223.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 223.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 219.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 218.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 218.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 217.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 216.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 216.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 214.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 214.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 214.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 213.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 213.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 212.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 212.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 210.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 209.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 209.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 209.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 205.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 204.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 204.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 201.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 200.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 199.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 198.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 198.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 198.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 198.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 195.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 194.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 193.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 192.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 192.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 192.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 191.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 191.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 190.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 189.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 189.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 188.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 188.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 188.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 188.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 187.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 187.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 187.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 187.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 186.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 185.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 185.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 183.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 181.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 181.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 180.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 180.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 179.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 179.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 179.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 177.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 177.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 177.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 176.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 176.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 176.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 175.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 175.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 175.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 175.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 174.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 173.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 173.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 173.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 172.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 172.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 172.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 171.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 171.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 171.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 171.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 171.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 171.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 171.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 170.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 170.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 170.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 168.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 168.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 167.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 167.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 167.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 167.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 167.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 167.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 166.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 166.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 166.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 166.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 166.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 166.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 164.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 164.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 163.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 163.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 163.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 163.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 163.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 162.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 162.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 162.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 162.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 162.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 161.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 161.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 160.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 160.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 160.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 159.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 159.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 159.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 159.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 157.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 156.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 155.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 155.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 155.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 155.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 155.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 154.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 154.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 154.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 153.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 153.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 153.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 153.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 153.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 153.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 153.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 153.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 153.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 151.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 150.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 150.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 148.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 148.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 148.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 148.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 147.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 147.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 146.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 146.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 146.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 145.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 145.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 145.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 144.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 144.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 142.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 142.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 142.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 142.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 142.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 142.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 141.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 141.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 140.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 140.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 140.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 140.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 140.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 139.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 139.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 139.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 137.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 137.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 137.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 136.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 136.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 136.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 136.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 136.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 135.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 135.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 134.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 134.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 134.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 133.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 133.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 133.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 133.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 133.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 133.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 132.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 132.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 131.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 131.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 130.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 130.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 130.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 129.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 127.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 127.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 126.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 126.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 125.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 125.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 124.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 124.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 123.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 123.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 123.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 122.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 121.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 120.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 120.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 119.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 118.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 116.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 113.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 110.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 109.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 108.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 107.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 101.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 76.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 67.1
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Brain - Putamen (basal ganglia)
Average nTPM: 136.1
Samples: 205

Max nTPM: 269.1
Min nTPM: 90.2
Std nTPM: 26.1
Median nTPM: 133.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 269.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 220.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 215.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 199.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 196.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 193.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 191.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 190.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 188.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 188.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 188.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 183.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 182.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 179.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 178.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 178.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 177.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 174.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 170.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 169.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 168.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 165.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 165.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 163.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 163.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 162.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 161.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 161.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 159.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 158.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 157.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 157.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 157.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 156.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 155.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 155.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 155.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 155.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 155.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 155.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 154.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 154.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 153.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 153.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 153.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 152.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 152.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 151.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 150.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 149.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 149.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 149.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 149.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 148.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 148.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 148.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 148.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 147.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 147.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 147.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 146.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 145.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 145.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 144.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 144.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 144.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 144.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 144.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 143.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 143.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 142.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 142.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 142.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 142.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 142.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 141.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 141.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 140.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 139.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 139.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 138.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 138.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 138.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 138.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 138.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 138.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 137.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 137.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 136.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 136.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 136.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 135.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 135.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 135.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 135.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 134.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 134.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 133.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 133.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 133.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 133.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 133.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 133.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 132.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 132.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 131.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 131.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 131.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 131.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 130.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 130.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 130.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 130.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 129.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 129.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 129.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 128.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 128.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 127.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 127.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 127.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 127.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 126.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 126.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 125.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 125.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 125.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 125.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 124.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 124.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 124.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 124.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 123.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 123.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 123.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 122.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 122.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 122.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 122.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 121.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 121.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 120.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 120.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 120.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 120.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 120.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 119.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 119.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 119.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 119.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 119.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 119.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 119.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 118.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 118.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 118.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 118.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 118.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 117.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 117.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 116.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 116.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 116.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 115.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 115.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 115.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 115.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 115.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 115.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 114.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 114.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 112.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 112.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 112.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 111.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 111.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 110.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 110.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 109.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 109.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 106.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 106.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 105.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 105.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 104.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 104.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 103.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 103.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 102.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 102.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 101.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 101.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 100.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 100.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 100.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 99.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 99.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 98.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 98.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 97.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 96.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 95.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 93.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 93.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 90.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

497.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 442.9
FF:10164-103B2 76 years, female 442.9
Nucleus accumbens
Scaled Tags Per Million: 374.7
FF:10037-101F1 23-56 years, mixed 374.7
Putamen
Scaled Tags Per Million: 497.2
FF:10176-103C5 60 years, female 497.2
Globus pallidus
Scaled Tags Per Million: 471.9
FF:10161-103A8 76 years, female 535.8
FF:10175-103C4 60 years, female 408.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.1
Pig sample Sample description nTPM
Caudate
nTPM: 155.9
Samples: 4

Max nTPM: 172.7
Min nTPM: 142.1
Sample A Female 156.5
Sample B Female 152.2
Sample C Male 172.7
Sample D Male 142.1
Putamen
nTPM: 167.7
Samples: 4

Max nTPM: 175.2
Min nTPM: 148.6
Sample A Female 174.1
Sample B Female 148.6
Sample C Male 173.0
Sample D Male 175.2
Septum
nTPM: 158.0
Samples: 4

Max nTPM: 210.9
Min nTPM: 122.7
Sample A Female 210.9
Sample B Female 166.6
Sample C Male 122.7
Sample D Male 131.9
Ventral pallidum
nTPM: 175.1
Samples: 4

Max nTPM: 187.3
Min nTPM: 144.8
Sample A Female 182.5
Sample B Female 185.6
Sample C Male 144.8
Sample D Male 187.3

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