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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.3 nTPM
HPA Brain:245.7 nTPM
GTEx:71.3 nTPM
FANTOM5:365.4 Scaled Tags Per Million
Pig:258.5 nTPM
Mouse:687.8 nTPM
Allen mouse:22.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011166Antibody HPA012945Antibody CAB005605
Glial cells Not detectedMediumMedium
Neuronal cells Not detectedHighMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

245.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 230.7
2846 Female, age 79, unknown 396.9
2290 Female, age 72, unknown 292.9
1857 Female, age 85, left hemisphere 274.7
1854 Male, age 80, left hemisphere 233.8
1781 Male, age 74, unknown 223.8
2289 Male, age 61, right hemisphere 168.0
2288 Male, age 75, left hemisphere 156.3
2481 Female, age 94, left hemisphere 99.4
Globus pallidus, externus
nTPM: 44.7
2395 Male, age 75, both hemispheres 77.8
2772 Female, age 79, unknown 45.2
2646 Male, age 61, right hemisphere 34.9
1996 Male, age 80, right hemisphere 34.7
2567 Female, age 72, unknown 31.0
Globus pallidus, internus
nTPM: 41.5
2483 Female, age 94, right hemisphere 69.4
2287 Male, age 75, right hemisphere 59.9
2778 Female, age 91, both hemispheres 35.3
1818 Male, age 74, unknown 34.5
2037 Male, age 80, right hemisphere 32.5
2566 Female, age 72, unknown 30.6
2111 Female, age 85, right hemisphere 28.6
Nucleus accumbens
nTPM: 181.8
1783 Male, age 74, unknown 276.7
1856 Female, age 91, right hemisphere 244.3
2824 Male, age 61, right hemisphere 235.0
1806 Female, age 85, left hemisphere 215.1
2698 Female, age 72, unknown 171.9
2286 Male, age 75, left hemisphere 145.7
2391 Female, age 94, left hemisphere 98.2
2732 Male, age 80, right hemisphere 67.7
Nucleus basalis of Meynert
nTPM: 136.3
2393 Male, age 80, right hemisphere 228.1
2484 Female, age 94, left hemisphere 160.6
2821 Male, age 75, both hemispheres 114.2
2569 Male, age 61, both hemispheres 42.4
Nucleus of the diagonal band
nTPM: 147.8
1812 Female, age 91, both hemispheres 173.5
2029 Male, age 61, right hemisphere 171.5
2775 Male, age 80, right hemisphere 167.6
2195 Female, age 85, both hemispheres 145.4
1979 Male, age 74, unknown 81.2
Putamen
nTPM: 245.7
2466 Female, age 79, unknown 423.0
1829 Male, age 74, unknown 371.1
1838 Male, age 80, right hemisphere 301.9
1937 Female, age 91, right hemisphere 212.7
2489 Female, age 72, unknown 199.6
2482 Female, age 94, left hemisphere 106.0
2647 Male, age 75, left hemisphere 105.9
Septal nuclei
nTPM: 111.1
2031 Female, age 72, unknown 165.1
1960 Male, age 74, unknown 149.2
2629 Female, age 94, right hemisphere 135.4
2009 Female, age 91, both hemispheres 131.1
2059 Female, age 85, both hemispheres 82.1
2394 Male, age 61, left hemisphere 58.2
2199 Male, age 80, right hemisphere 56.7
Stria terminalis, bed nucleus
nTPM: 132.4
2486 Female, age 94, both hemispheres 181.6
1974 Female, age 91, both hemispheres 163.4
2201 Male, age 74, unknown 52.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 71.3
Samples: 246

Max nTPM: 335.2
Min nTPM: 8.3
Std nTPM: 49.8
Median nTPM: 61.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 335.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 238.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 231.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 228.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 197.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 192.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 176.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 173.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 169.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 167.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 167.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 166.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 166.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 166.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 158.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 157.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 155.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 153.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 151.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 149.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 143.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 142.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 141.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 141.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 137.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 137.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 133.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 132.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 132.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 126.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 125.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 124.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 121.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 120.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 119.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 119.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 118.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 116.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 115.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 115.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 113.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 112.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 112.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 111.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 111.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 111.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 109.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 108.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 108.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 107.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 107.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 107.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 106.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 106.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 105.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 105.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 101.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 99.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 99.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 98.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 96.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 96.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 96.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 95.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 95.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 94.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 92.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 92.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 91.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 91.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 90.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 90.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 90.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 88.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 87.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 86.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 85.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 84.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 83.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 83.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 81.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 81.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 81.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 80.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 80.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 80.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 80.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 79.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 79.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 78.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 78.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 77.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 75.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 74.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 73.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 71.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 71.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 71.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 71.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 71.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 68.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 68.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 66.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 65.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 65.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 64.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 64.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 62.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 62.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 62.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 62.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 61.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 61.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 60.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 60.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 60.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 59.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 57.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 57.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 56.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 54.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 54.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 54.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 54.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 53.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 53.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 52.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 52.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 51.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 51.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 50.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 50.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 50.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 50.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 49.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 49.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 49.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 48.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 47.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 47.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 46.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 43.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 43.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 43.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 43.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 43.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 43.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 42.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 41.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 40.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 37.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 37.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 36.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 36.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 36.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 35.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 35.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 35.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 34.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 34.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 33.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 33.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 33.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 33.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 33.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 32.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 32.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 31.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 31.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 31.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 29.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 28.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 27.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 27.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 27.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 27.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 26.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 25.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 24.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 24.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 24.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 24.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 23.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 23.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 23.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 22.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 21.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 21.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 21.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 21.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 21.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 21.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 21.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 21.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 20.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 20.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 20.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 19.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 18.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 18.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 18.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 18.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 17.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 16.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 16.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 16.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 15.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 14.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 12.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 11.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 10.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 10.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 9.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 8.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 59.8
Samples: 246

Max nTPM: 161.9
Min nTPM: 8.1
Std nTPM: 34.8
Median nTPM: 57.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 161.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 149.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 148.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 144.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 144.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 136.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 134.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 132.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 132.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 131.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 131.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 131.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 124.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 124.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 124.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 120.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 119.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 117.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 114.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 113.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 113.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 112.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 111.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 110.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 109.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 108.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 107.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 104.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 104.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 102.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 101.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 101.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 99.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 99.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 98.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 97.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 97.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 95.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 95.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 95.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 94.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 94.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 93.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 91.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 91.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 90.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 89.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 89.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 89.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 89.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 88.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 87.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 86.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 86.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 85.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 85.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 84.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 83.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 82.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 82.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 81.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 81.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 81.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 81.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 80.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 80.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 80.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 80.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 79.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 78.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 78.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 77.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 77.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 76.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 75.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 75.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 74.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 74.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 74.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 74.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 73.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 73.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 72.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 72.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 71.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 71.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 71.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 71.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 70.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 70.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 70.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 69.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 68.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 67.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 67.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 66.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 66.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 66.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 65.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 65.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 65.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 64.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 64.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 63.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 63.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 63.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 62.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 62.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 61.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 60.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 60.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 60.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 59.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 59.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 59.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 58.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 58.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 58.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 58.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 57.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 57.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 57.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 57.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 56.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 56.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 56.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 56.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 56.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 56.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 55.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 55.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 53.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 53.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 53.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 53.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 52.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 51.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 51.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 51.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 51.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 51.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 50.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 50.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 49.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 49.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 48.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 47.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 47.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 47.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 47.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 45.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 45.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 44.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 43.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 43.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 43.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 42.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 42.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 42.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 40.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 40.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 40.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 40.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 39.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 38.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 38.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 37.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 37.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 37.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 36.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 36.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 36.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 35.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 33.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 32.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 32.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 32.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 30.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 30.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 30.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 29.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 29.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 28.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 27.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 26.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 26.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 26.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 26.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 26.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 25.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 24.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 24.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 23.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 23.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 22.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 22.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 22.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 21.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 20.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 20.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 20.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 19.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 19.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 19.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 19.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 19.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 19.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 18.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 18.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 17.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 17.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 15.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 15.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 15.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 14.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 14.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 14.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 14.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 13.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 12.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 12.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 12.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 12.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 11.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 10.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 10.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 10.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 10.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 9.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 9.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 9.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 9.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 8.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 8.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 8.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 8.1
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Brain - Putamen (basal ganglia)
Average nTPM: 64.1
Samples: 205

Max nTPM: 229.1
Min nTPM: 6.2
Std nTPM: 42.1
Median nTPM: 58.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 229.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 212.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 167.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 164.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 152.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 149.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 148.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 148.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 146.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 146.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 143.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 136.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 135.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 134.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 131.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 130.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 130.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 126.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 126.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 125.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 124.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 123.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 121.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 121.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 121.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 118.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 118.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 118.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 117.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 115.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 113.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 112.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 111.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 110.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 109.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 106.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 105.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 104.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 103.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 102.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 101.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 100.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 96.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 95.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 94.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 93.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 90.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 89.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 89.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 88.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 88.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 88.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 87.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 87.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 86.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 85.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 85.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 83.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 81.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 79.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 79.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 78.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 78.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 77.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 77.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 77.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 76.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 75.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 74.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 72.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 72.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 71.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 71.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 71.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 70.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 70.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 69.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 69.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 68.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 68.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 67.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 67.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 67.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 66.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 66.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 66.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 66.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 66.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 64.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 63.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 63.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 62.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 62.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 62.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 61.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 61.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 60.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 60.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 59.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 58.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 56.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 56.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 55.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 54.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 54.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 54.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 53.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 53.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 52.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 50.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 48.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 48.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 47.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 47.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 47.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 47.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 47.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 46.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 45.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 45.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 45.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 43.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 43.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 43.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 42.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 42.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 41.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 41.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 39.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 39.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 39.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 38.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 38.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 36.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 36.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 35.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 35.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 34.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 34.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 34.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 34.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 33.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 31.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 28.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 28.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 26.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 26.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 25.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 25.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 23.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 23.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 23.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 21.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 21.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 21.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 20.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 20.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 20.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 20.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 19.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 18.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 18.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 18.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 17.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 17.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 15.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 15.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 14.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 14.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 13.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 12.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 12.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 12.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 12.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 10.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 9.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 7.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

365.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 219.8
FF:10164-103B2 76 years, female 219.8
Nucleus accumbens
Scaled Tags Per Million: 251.4
FF:10037-101F1 23-56 years, mixed 251.4
Putamen
Scaled Tags Per Million: 365.4
FF:10176-103C5 60 years, female 365.4
Globus pallidus
Scaled Tags Per Million: 144.2
FF:10175-103C4 60 years, female 218.1
FF:10161-103A8 76 years, female 70.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

258.5
Pig sample Sample description nTPM
Caudate
nTPM: 188.6
Samples: 4

Max nTPM: 232.6
Min nTPM: 158.9
Sample A Female 159.9
Sample B Female 158.9
Sample C Male 232.6
Sample D Male 202.8
Putamen
nTPM: 258.5
Samples: 4

Max nTPM: 474.1
Min nTPM: 80.6
Sample A Female 80.6
Sample B Female 239.2
Sample C Male 474.1
Sample D Male 239.9
Septum
nTPM: 77.9
Samples: 4

Max nTPM: 102.0
Min nTPM: 50.2
Sample A Female 102.0
Sample B Female 101.8
Sample C Male 50.2
Sample D Male 57.5
Ventral pallidum
nTPM: 114.3
Samples: 4

Max nTPM: 146.4
Min nTPM: 57.2
Sample A Female 146.4
Sample B Female 135.4
Sample C Male 57.2
Sample D Male 118.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

687.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 687.9
Samples: 4

Max nTPM: 773.3
Min nTPM: 596.3
Sample A Male 761.3
Sample B Male 773.3
Sample C Female 596.3
Sample D Female 620.5
Septum
nTPM: 172.3
Samples: 4

Max nTPM: 183.8
Min nTPM: 162.1
Sample A Male 183.8
Sample B Male 173.3
Sample C Female 162.1
Sample D Female 169.9
Ventral forebrain
nTPM: 330.2
Samples: 4

Max nTPM: 348.6
Min nTPM: 304.7
Sample A Male 345.3
Sample B Male 322.3
Sample C Female 304.7
Sample D Female 348.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 22.8
77280449 Antisense, RP_070116_01_F06, Mouse strain C57BL/6J (56 days, male) 23.4
75197618 Antisense, RP_060502_01_C12, Mouse strain C57BL/6J (56 days, male) 22.1
Pallidum
Expression energy: 9.3
75197618 Antisense, RP_060502_01_C12, Mouse strain C57BL/6J (56 days, male) 10.4
77280449 Antisense, RP_070116_01_F06, Mouse strain C57BL/6J (56 days, male) 8.1

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