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RPL31
HPA
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CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL31 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 2609.92
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3037.5
Number of samples 497
Samples
Sample Description pTPM
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 10116.1
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 9606.8
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 8596.5
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 7768.1
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 7601.5
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 7534.6
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 7313.0
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 7180.4
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 6753.3
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 6703.1
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 6648.9
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 6492.9
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 6476.7
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 6267.0
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 6132.5
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 6048.3
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 6009.8
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 5935.7
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 5916.3
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 5883.4
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 5835.8
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 5749.7
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 5742.6
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 5625.3
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 5616.7
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 5417.1
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 5366.7
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 5323.9
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 5218.3
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 5190.0
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 5146.9
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 5129.0
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 5036.4
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 4970.9
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 4950.9
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 4939.3
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 4912.5
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 4864.3
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 4855.9
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 4835.7
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 4801.8
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 4725.8
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 4725.6
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 4690.8
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 4684.7
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 4677.5
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 4661.0
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 4641.6
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 4619.8
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 4540.9
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 4486.5
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 4422.3
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 4384.5
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 4353.3
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 4352.3
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 4344.7
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 4339.5
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 4339.1
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 4331.1
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 4325.6
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 4317.3
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 4309.9
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 4270.7
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 4263.1
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 4250.8
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 4229.8
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 4213.9
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 4197.4
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 4191.6
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 4163.6
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 4153.0
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 4151.4
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 4139.5
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 4132.8
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 4106.2
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 4083.1
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 4081.8
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 4081.3
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 4057.0
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 4052.2
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 4048.9
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 4024.6
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 4012.6
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 3997.2
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 3982.5
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 3967.4
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 3944.8
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 3917.4
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 3917.2
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 3910.5
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 3902.3
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 3886.6
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 3881.7
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 3881.6
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 3869.0
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 3868.4
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 3862.3
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 3842.6
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 3837.0
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 3832.2
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 3830.6
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 3818.6
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 3816.5
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 3815.0
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 3814.5
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 3774.9
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 3769.4
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 3765.5
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 3759.6
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 3747.8
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 3740.3
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 3730.3
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 3714.1
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 3710.8
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 3705.2
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 3690.3
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 3689.2
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 3676.4
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 3648.6
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 3647.7
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 3641.6
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 3640.1
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 3637.1
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 3635.1
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 3624.7
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 3612.9
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 3609.1
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 3601.3
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 3594.6
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 3587.2
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 3568.8
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 3557.1
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 3552.8
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 3542.7
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 3534.6
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 3525.4
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 3507.6
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 3507.5
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 3479.7
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 3476.5
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 3472.4
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 3461.2
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 3456.6
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 3451.4
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 3442.2
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 3434.1
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 3422.3
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 3421.4
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 3421.3
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 3420.9
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 3415.3
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 3403.5
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 3386.6
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 3382.6
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 3372.5
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 3366.8
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 3357.7
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 3355.4
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 3345.8
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 3336.8
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 3321.2
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 3313.8
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 3313.7
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 3306.3
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 3302.3
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 3292.2
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 3289.3
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 3284.0
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 3279.9
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 3276.0
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 3272.1
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 3271.3
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 3238.3
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 3231.9
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 3225.4
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 3214.7
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 3198.5
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 3196.3
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 3191.0
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 3185.4
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 3184.0
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 3169.6
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 3169.5
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 3163.0
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 3161.1
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 3160.5
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 3138.8
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 3137.4
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 3137.1
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 3112.4
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 3108.5
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 3101.3
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 3096.9
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 3096.2
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 3094.4
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 3089.1
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 3086.8
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 3074.1
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 3054.3
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 3050.4
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 3040.5
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 3037.7
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 3033.6
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 3022.0
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 3008.0
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 3007.4
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 3004.8
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 2998.6
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 2991.5
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 2989.3
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 2988.6
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 2986.5
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 2983.6
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 2979.7
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 2967.5
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 2966.8
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 2959.8
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 2955.4
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 2954.1
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 2953.0
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 2948.1
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 2946.5
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 2940.0
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 2939.6
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 2939.4
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 2939.1
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 2930.5
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 2912.0
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 2910.8
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 2910.4
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 2885.8
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 2884.6
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 2877.5
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 2876.4
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 2874.0
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 2863.6
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 2862.8
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 2857.6
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 2856.8
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 2850.9
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 2850.3
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 2830.6
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 2824.0
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 2822.9
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 2812.4
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 2800.7
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 2785.8
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 2777.7
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 2773.2
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 2755.7
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 2749.0
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 2722.3
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 2720.1
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 2719.1
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 2711.5
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 2707.7
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 2704.8
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 2702.1
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 2694.9
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 2685.2
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 2680.5
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 2679.7
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 2666.0
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 2660.1
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 2656.9
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 2656.5
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 2651.5
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 2650.9
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 2649.1
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 2648.0
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 2646.0
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 2645.2
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 2640.8
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 2633.6
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 2618.5
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 2615.5
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 2615.0
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 2610.8
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 2609.1
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 2596.5
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 2584.3
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 2580.1
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 2572.8
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 2571.4
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 2569.9
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 2560.4
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 2552.3
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 2550.5
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 2549.4
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 2546.7
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 2545.9
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 2544.8
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 2533.6
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 2528.6
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 2527.2
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 2518.4
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 2518.1
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 2514.5
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 2510.8
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 2507.5
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 2502.7
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 2481.2
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 2479.8
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 2478.2
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 2473.6
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 2460.2
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 2458.6
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 2458.1
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 2456.7
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 2450.1
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 2440.9
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 2434.5
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 2430.6
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 2429.5
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 2429.4
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 2422.5
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 2422.5
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 2419.2
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 2413.3
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 2409.6
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 2409.5
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 2405.8
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 2396.2
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 2394.3
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 2390.9
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 2390.1
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 2389.4
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 2383.4
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 2378.0
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 2377.7
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 2375.6
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 2375.3
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 2368.3
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 2363.9
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 2360.2
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 2354.1
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 2345.5
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 2344.5
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 2343.9
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 2330.6
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 2322.8
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 2314.3
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 2312.2
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 2310.7
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 2310.2
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 2309.0
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 2305.6
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 2301.5
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 2300.6
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 2298.8
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 2293.9
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 2293.7
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 2293.7
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 2293.6
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 2286.2
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 2285.4
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 2280.9
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 2280.3
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 2279.5
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 2274.3
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 2271.8
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 2268.7
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 2265.5
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 2252.5
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 2252.2
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 2252.1
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 2248.4
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 2241.2
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 2231.7
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 2229.1
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 2226.8
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 2222.3
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 2193.3
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 2190.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 2188.8
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 2166.8
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 2162.5
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 2162.4
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 2157.8
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 2151.9
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 2148.0
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 2147.9
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 2141.0
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 2139.7
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 2139.4
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 2134.4
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 2132.3
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 2131.8
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 2129.1
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 2121.5
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 2100.5
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 2092.9
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 2075.7
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 2073.5
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 2071.5
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 2071.0
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 2065.5
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 2065.2
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 2064.0
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 2063.2
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 2063.1
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 2045.3
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 2044.4
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 2022.6
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 2022.3
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 2010.7
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 2004.0
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 1998.5
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 1996.9
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 1994.5
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 1991.2
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 1987.3
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 1977.0
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 1969.7
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 1953.1
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 1946.0
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 1940.6
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 1939.7
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 1937.4
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 1936.0
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 1933.5
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 1919.4
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 1912.7
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 1907.9
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 1902.1
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 1901.7
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 1901.2
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 1889.2
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 1871.8
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 1859.3
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 1854.0
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 1849.9
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 1845.1
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 1844.8
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 1842.9
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 1827.4
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 1826.5
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 1825.8
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 1804.2
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 1797.7
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 1796.6
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 1792.0
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 1783.2
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 1781.3
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 1778.6
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 1778.5
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 1759.3
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 1756.1
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 1752.9
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 1739.6
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 1719.6
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 1719.0
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 1718.6
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 1709.9
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 1679.3
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 1678.0
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 1662.6
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 1657.9
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 1647.3
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 1635.9
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 1625.6
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 1580.3
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 1572.7
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 1569.7
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 1568.2
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 1555.1
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 1553.3
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 1553.0
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 1538.5
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 1533.5
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 1530.4
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 1522.8
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 1513.4
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 1491.3
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 1485.3
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 1454.7
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 1451.8
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 1449.0
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 1446.4
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 1419.5
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 1417.2
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 1411.2
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 1407.3
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 1399.1
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 1389.6
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 1383.6
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 1383.4
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 1359.8
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 1297.0
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 1293.9
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 1292.2
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 1280.1
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 1274.8
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 1208.8
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1162.6
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 1135.6
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 953.4
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL31 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 2120.98
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 2228.6
Number of samples 105
Samples
Sample Description pTPM
L616 54 years, male, stage:Stage IA, dead, 410 days 6956.6
L851 70 years, male, stage:Stage IB, dead, 1315 days 5164.0
L683 77 years, female, stage:Stage IIA, dead, 612 days 4046.7
L561 62 years, female, stage:Stage IA, alive, 2543 days 3662.2
L473 66 years, female, stage:Stage IA, alive, 3021 days 3569.7
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 3417.2
L850 77 years, male, stage:Stage IIIA, dead, 997 days 3261.8
L842 62 years, female, stage:Stage IB, alive, 2005 days 3260.3
L605 74 years, female, stage:Stage IA, alive, 2460 days 3254.7
L689 69 years, male, stage:Stage IA, alive, 1943 days 3056.8
L551 62 years, male, stage:Stage IA, alive, 2924 days 3023.5
L782 73 years, female, stage:Stage IIB, alive, 3371 days 2986.2
L662 66 years, male, stage:Stage IA, dead, 865 days 2980.4
L731 59 years, female, stage:Stage IA, dead, 964 days 2919.4
L603 70 years, female, stage:Stage IB, dead, 972 days 2887.9
L493 56 years, female, stage:Stage IIB, alive, 2945 days 2800.0
L746 64 years, female, stage:Stage IIIA, dead, 594 days 2796.4
L791 66 years, female, stage:Stage IIIA, dead, 368 days 2780.2
L773 64 years, female, stage:Stage IV, dead, 311 days 2776.6
L462 67 years, male, stage:Stage IIIA, dead, 568 days 2755.9
L532 69 years, female, stage:Stage IA, dead, 301 days 2751.2
L877 70 years, female, stage:Stage IA, alive, 1599 days 2740.9
L682 64 years, female, stage:Stage IIB, dead, 840 days 2721.8
L829 76 years, male, stage:Stage IA, alive, 2173 days 2692.4
L630 65 years, female, stage:Stage IA, dead, 1733 days 2653.1
L557 81 years, female, stage:Stage IB, alive, 2580 days 2620.6
L531 74 years, male, stage:Stage IB, dead, 928 days 2596.0
L867 62 years, female, stage:Stage IIIA, dead, 317 days 2575.9
L827 70 years, male, stage:Stage IIB, dead, 1105 days 2541.3
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 2505.3
L458 76 years, female, stage:Stage IA, dead, 223 days 2503.3
L601 75 years, male, stage:Stage IB, dead, 2068 days 2468.6
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 2437.5
L879 75 years, male, stage:Stage IV, dead, 873 days 2435.3
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 2395.4
L439 80 years, male, stage:Stage IIB, dead, 2773 days 2391.5
L710 72 years, female, stage:Stage IIA, alive, 1775 days 2308.5
L778 65 years, female, stage:Stage IA, alive, 1600 days 2296.1
L816 73 years, female, stage:Stage IIA, dead, 353 days 2288.0
L678 65 years, female, stage:Stage IB, dead, 1114 days 2252.2
L703 71 years, male, stage:Stage IIA, dead, 1137 days 2252.0
L602 69 years, female, stage:Stage IA, alive, 2277 days 2213.7
L620 70 years, female, stage:Stage IIIA, dead, 338 days 2211.1
L613 72 years, male, stage:Stage IIIA, dead, 19 days 2196.5
L673 74 years, female, stage:Stage IA, dead, 568 days 2142.5
L530 76 years, female, stage:Stage IIA, dead, 308 days 2135.1
L688 57 years, male, stage:Stage IIIA, dead, 789 days 2134.4
L546 57 years, male, stage:Stage IA, dead, 973 days 2121.0
L569 76 years, female, stage:Stage IA, alive, 2531 days 2118.0
L565 59 years, female, stage:Stage IB, dead, 543 days 2102.9
L656 58 years, male, stage:Stage IA, alive, 2227 days 2100.3
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 2066.1
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 2064.8
L484 64 years, female, stage:Stage IA, alive, 2895 days 2062.3
L890 56 years, female, stage:Stage IIB, dead, 1264 days 2043.5
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 2021.8
L875 69 years, female, stage:Stage IA, alive, 1675 days 2008.6
L885 62 years, female, stage:Stage IA, alive, 1618 days 1995.3
L738 74 years, female, stage:Stage IB, dead, 1314 days 1992.1
L768 60 years, male, stage:Stage IIIA, dead, 472 days 1974.3
L566 58 years, male, stage:Stage IB, alive, 2489 days 1970.8
L626 76 years, female, stage:Stage IA, dead, 1994 days 1942.1
L695 68 years, female, stage:Stage IB, dead, 1762 days 1901.1
L865 75 years, female, stage:Stage IIB, alive, 1927 days 1900.4
L826 45 years, female, stage:Stage IV, dead, 935 days 1897.4
L585 70 years, female, stage:Stage IIA, dead, 402 days 1854.0
L593 78 years, male, stage:Stage IA, dead, 2436 days 1848.8
L663 62 years, female, stage:Stage IB, alive, 2018 days 1845.5
L617 68 years, male, stage:Stage IIIA, dead, 238 days 1820.7
L606 55 years, male, stage:Stage IA, alive, 2336 days 1770.2
L766 59 years, male, stage:Stage IB, alive, 1793 days 1770.0
L887 77 years, male, stage:Stage IA, dead, 374 days 1764.7
L871 74 years, male, stage:Stage IB, dead, 873 days 1738.7
L638 65 years, male, stage:Stage IA, alive, 2076 days 1734.2
L728 77 years, male, stage:Stage IIB, dead, 1128 days 1725.3
L810 64 years, female, stage:Stage IIIA, dead, 625 days 1720.2
L872 71 years, female, stage:Stage IA, alive, 1793 days 1717.4
L440 80 years, male, stage:Stage IIB, dead, 651 days 1706.4
L455 52 years, female, stage:Stage IA, alive, 3315 days 1700.5
L802 62 years, female, stage:Stage IA, dead, 773 days 1692.6
L832 65 years, female, stage:Stage IA, alive, 2145 days 1691.3
L808 48 years, female, stage:Stage IA, alive, 3001 days 1686.1
L413 72 years, female, stage:Stage IIIA, dead, 313 days 1686.0
L800 66 years, female, stage:Stage IA, dead, 2417 days 1685.1
L873 62 years, female, stage:Stage IA, alive, 1740 days 1684.6
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 1656.8
L404 74 years, female, stage:Stage IIA, dead, 2318 days 1655.3
L828 68 years, female, stage:Stage IIB, alive, 2222 days 1638.9
L400 78 years, male, stage:Stage IIA, dead, 1233 days 1634.6
L446 71 years, female, stage:Stage IIB, dead, 415 days 1612.6
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 1563.7
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 1563.3
L545 60 years, female, stage:Stage IA, alive, 2874 days 1549.9
L749 49 years, female, stage:Stage IIIA, dead, 189 days 1513.8
L838 71 years, female, stage:Stage IA, dead, 1005 days 1467.1
L735 75 years, female, stage:Stage IA, alive, 1830 days 1432.4
L504 65 years, female, stage:Stage IA, dead, 1295 days 1423.3
L596 74 years, female, stage:Stage IA, alive, 2319 days 1412.4
L543 65 years, male, stage:Stage IA, alive, 2711 days 1394.1
L541 70 years, female, stage:Stage IIIA, dead, 915 days 1341.1
L599 80 years, male, stage:Stage IB, dead, 2083 days 1323.5
L725 64 years, female, stage:Stage IA, alive, 1830 days 1255.4
L831 62 years, female, stage:Stage IB, alive, 2152 days 1227.2
L607 59 years, male, stage:Stage IB, alive, 2572 days 1202.0
L880 75 years, female, stage:Stage IA, alive, 1767 days 1200.4
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL31 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3541.62
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3230.8
Number of samples 489
Samples
Sample Description pTPM
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 11535.8
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 11133.9
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 10887.3
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 10593.2
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 10164.0
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 8031.6
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 7872.2
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 7516.4
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 7324.9
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 7215.0
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 6770.7
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 6672.2
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 6547.3
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 6534.7
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 6440.2
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 6392.8
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 6381.6
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 6320.2
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 6264.5
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 6236.8
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 6225.0
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 6204.6
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 6115.3
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 6079.3
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 6044.3
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 6031.1
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 6006.1
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 5897.5
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 5864.7
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 5755.7
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 5670.7
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 5662.4
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 5535.6
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 5516.4
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 5497.2
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 5480.8
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 5479.2
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 5441.9
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 5439.6
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 5373.2
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 5370.3
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 5318.6
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 5287.0
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 5286.9
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 5185.6
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 5168.1
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 5096.7
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 5068.2
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 4994.6
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 4919.6
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 4915.9
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 4887.2
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 4850.5
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 4830.0
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 4804.4
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 4793.8
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 4779.8
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 4772.7
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 4764.5
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 4763.5
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 4718.9
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 4717.1
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 4668.9
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 4667.8
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 4611.1
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 4589.5
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 4559.4
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 4552.3
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 4546.7
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 4510.6
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 4461.7
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 4456.7
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 4440.1
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 4439.9
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 4405.0
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 4386.7
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 4383.9
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 4348.9
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 4322.9
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 4318.8
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 4300.5
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 4219.4
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 4207.3
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 4195.7
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 4179.6
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 4165.7
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 4162.5
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 4157.4
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 4150.4
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 4132.8
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 4128.9
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 4104.7
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 4102.2
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 4100.7
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 4100.6
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 4087.4
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 4079.2
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 4079.0
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 4078.8
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 4068.9
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 4066.5
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 4046.6
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 4038.6
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 4029.3
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 4027.2
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 4018.0
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 4014.7
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 3988.7
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 3970.5
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 3966.7
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 3963.7
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 3959.9
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 3958.8
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 3952.7
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 3941.3
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 3940.9
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 3939.8
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 3933.5
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 3928.2
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 3914.8
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 3908.1
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 3903.9
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 3889.9
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 3876.0
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 3868.4
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 3851.9
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 3847.1
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 3842.4
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 3814.4
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 3813.7
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 3811.6
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 3808.5
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 3791.8
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 3788.2
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 3759.5
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 3756.9
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 3750.3
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 3748.6
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 3748.2
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 3739.0
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 3735.5
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 3726.8
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 3717.1
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 3714.8
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 3707.1
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 3702.4
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 3699.3
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 3698.2
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 3695.1
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3692.9
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 3691.3
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 3668.2
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 3663.5
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 3655.9
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 3644.1
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 3612.5
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 3610.6
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 3598.7
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 3596.3
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 3590.5
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 3585.5
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 3584.6
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 3584.3
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 3572.1
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 3561.6
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 3548.2
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 3535.0
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 3524.9
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 3519.3
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 3512.1
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 3507.9
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 3492.3
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 3479.4
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 3467.7
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 3451.5
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 3450.2
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 3411.8
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 3372.9
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 3368.6
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 3367.1
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 3364.6
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 3351.1
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 3349.5
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 3339.5
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 3333.8
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 3316.8
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 3290.2
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 3275.5
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 3271.6
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 3264.5
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 3260.0
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 3259.0
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 3258.0
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 3251.2
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 3250.8
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 3249.2
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 3249.0
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 3242.1
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 3239.8
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 3234.6
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 3229.7
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 3225.1
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 3223.3
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 3210.1
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 3208.2
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 3207.7
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 3204.3
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 3196.3
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 3189.6
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 3187.9
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 3181.5
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 3178.3
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 3174.3
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 3147.6
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 3146.5
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 3138.3
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 3134.0
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 3131.2
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 3119.6
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 3102.2
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 3098.1
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 3095.6
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 3083.4
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 3083.0
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 3076.8
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 3074.5
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 3072.3
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 3071.8
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 3057.3
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 3056.6
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 3044.2
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 3041.7
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 3018.1
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 3012.2
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 3005.3
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 2997.4
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 2989.4
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 2970.5
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 2968.9
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 2958.5
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 2955.2
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 2951.4
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 2943.1
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 2942.5
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 2927.7
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 2922.5
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 2920.8
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 2901.3
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 2895.2
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 2888.5
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 2884.5
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 2883.6
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 2877.1
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 2876.3
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 2863.2
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 2859.6
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 2849.9
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 2846.9
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 2829.6
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 2821.0
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 2805.8
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 2804.7
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 2781.0
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 2765.0
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 2755.6
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 2750.6
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 2748.5
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 2748.2
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 2736.5
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 2732.1
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 2731.7
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 2727.6
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 2702.5
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 2695.0
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 2685.9
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 2668.6
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 2663.2
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 2662.5
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 2653.0
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 2651.6
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 2644.8
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 2630.8
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 2620.7
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 2609.8
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 2609.0
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 2599.0
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 2595.5
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 2586.7
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 2584.1
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 2579.1
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 2579.0
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 2570.8
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 2567.2
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 2565.2
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 2564.8
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 2560.8
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 2550.0
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 2549.2
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 2539.8
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 2537.7
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 2534.2
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 2521.9
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 2520.4
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 2512.8
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 2505.5
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 2504.2
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 2500.0
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 2499.1
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 2497.4
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 2496.5
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 2494.7
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 2491.8
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 2484.3
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 2482.5
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 2476.4
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 2474.0
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 2460.2
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 2453.5
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 2453.2
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 2452.9
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 2450.5
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 2448.3
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 2444.7
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 2430.7
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 2429.4
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 2426.3
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 2425.6
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 2423.7
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 2420.9
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 2418.8
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 2411.9
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 2404.8
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 2402.5
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2394.7
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 2393.0
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 2380.3
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 2380.0
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 2377.1
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 2376.4
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 2374.0
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 2368.6
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 2361.4
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 2358.4
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 2356.5
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 2354.4
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 2353.5
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 2353.5
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 2353.1
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 2341.5
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 2332.3
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 2322.8
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 2308.6
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 2302.0
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 2299.5
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 2292.3
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 2284.4
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 2278.6
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 2275.6
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 2274.8
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 2272.9
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 2266.0
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 2258.8
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 2245.5
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 2244.5
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 2229.9
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 2227.6
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 2226.3
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 2225.4
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 2218.9
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 2217.1
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 2215.0
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 2208.4
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 2205.6
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 2205.1
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 2204.2
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 2202.5
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 2202.2
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 2199.1
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 2198.0
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 2196.0
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 2192.7
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 2183.9
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 2182.0
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 2180.2
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 2176.7
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 2173.7
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 2163.7
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 2159.5
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 2154.7
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 2152.7
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 2152.5
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 2145.9
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 2133.6
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 2130.7
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 2106.0
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 2105.3
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 2104.0
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 2101.6
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 2097.9
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 2096.4
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 2081.1
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 2080.7
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 2071.1
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 2068.9
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 2064.6
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 2056.0
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 2053.1
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 2044.1
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 2039.2
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 2027.7
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 2024.6
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 2003.9
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 2003.7
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 1998.5
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 1973.7
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 1971.9
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 1954.9
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 1949.9
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 1932.2
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 1929.4
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 1920.9
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 1920.1
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 1918.5
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 1918.4
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 1907.0
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 1904.0
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 1901.5
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 1886.5
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 1886.4
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 1881.3
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 1879.9
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 1878.2
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 1875.5
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 1856.4
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 1830.8
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 1817.6
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 1809.5
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 1800.5
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 1800.1
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 1796.4
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 1788.9
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 1771.6
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 1752.2
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 1738.4
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 1734.3
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 1728.1
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 1720.8
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 1712.9
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 1712.3
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 1708.9
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 1689.3
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 1688.9
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 1687.9
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 1684.8
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 1684.5
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 1682.7
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 1667.8
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 1656.4
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 1598.8
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 1584.0
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 1577.2
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 1565.0
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 1555.4
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 1518.3
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 1503.1
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 1464.9
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 1456.1
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 1434.3
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 1419.3
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 1402.3
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 1392.4
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 1382.1
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 1374.2
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 1360.3
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 1332.1
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 1322.7
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 1321.0
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 1315.6
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 1278.1
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 1260.4
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 1236.9
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 1223.0
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 1216.2
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 1207.0
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 1135.0
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 1123.2
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 1066.6
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 975.4
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 938.9
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL31 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 1492.61
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 2164.2
Number of samples 68
Samples
Sample Description pTPM
L857 69 years, male, stage:Stage IB, dead, 226 days 7158.6
L457 46 years, female, stage:Stage IIA, alive, 2901 days 6101.4
L608 73 years, male, stage:Stage IA, alive, 2350 days 5273.3
L447 67 years, male, stage:Stage IIB, alive, 3203 days 4215.4
L466 65 years, female, stage:Stage IIIA, dead, 412 days 3609.8
L468 53 years, male, stage:Stage IB, alive, 3004 days 3601.3
L592 61 years, male, stage:Stage IB, alive, 2368 days 3468.1
L744 75 years, male, stage:Stage IA, alive, 1614 days 3425.3
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 3073.6
L650 69 years, female, stage:Stage IB, dead, 986 days 3059.5
L739 49 years, female, stage:Stage IIIA, dead, 352 days 2863.2
L736 67 years, male, stage:Stage IA, dead, 1195 days 2678.0
L420 57 years, female, stage:Stage IIB, dead, 295 days 2638.0
L459 75 years, male, stage:Stage IIA, alive, 3181 days 2516.0
L854 62 years, female, stage:Stage IB, alive, 2256 days 2511.8
L563 61 years, female, stage:Stage IIB, dead, 1216 days 2489.6
L464 66 years, male, stage:Stage IB, dead, 1935 days 2446.1
L539 78 years, male, stage:Stage IB, dead, 370 days 2440.7
L568 77 years, female, stage:Stage IIB, dead, 71 days 2429.1
L818 67 years, male, stage:Stage IB, alive, 2480 days 2412.4
L852 64 years, male, stage:Stage IB, dead, 700 days 2377.0
L753 61 years, male, stage:Stage IIA, alive, 1705 days 2329.1
L586 67 years, male, stage:Stage IIA, dead, 784 days 2284.8
L496 77 years, male, stage:Stage IB, alive, 2761 days 2240.8
L820 73 years, female, stage:Stage IA, alive, 2405 days 2179.2
L529 79 years, female, stage:Stage IA, alive, 2775 days 2169.8
L444 74 years, female, stage:Stage IIB, alive, 3337 days 2144.1
L483 65 years, male, stage:Stage IB, dead, 77 days 2016.8
L534 66 years, male, stage:Stage IIA, alive, 2693 days 2013.4
L559 72 years, male, stage:Stage IIB, alive, 2615 days 2003.5
L767 67 years, male, stage:Stage IA, alive, 1718 days 1997.8
L488 61 years, female, stage:Stage IIA, alive, 2993 days 1928.4
L456 48 years, male, stage:Stage IIA, dead, 1660 days 1916.8
L824 70 years, male, stage:Stage IA, dead, 665 days 1901.3
L886 71 years, male, stage:Stage IB, dead, 1932 days 1873.4
L712 61 years, male, stage:Stage IA, alive, 1698 days 1816.1
L490 58 years, male, stage:Stage IA, dead, 716 days 1800.3
L655 62 years, male, stage:Stage IIA, dead, 1603 days 1766.0
L470 78 years, female, stage:Stage IB, dead, 1774 days 1715.0
L642 67 years, male, stage:Stage IB, dead, 1167 days 1708.5
L881 70 years, male, stage:Stage IB, alive, 1752 days 1681.7
L604 67 years, male, stage:Stage IIA, dead, 286 days 1666.5
L723 67 years, male, stage:Stage IIA, dead, 433 days 1648.9
L856 69 years, male, stage:Stage IA, dead, 1465 days 1634.8
L715 69 years, female, stage:Stage IIIA, dead, 150 days 1626.5
L755 82 years, male, stage:Stage IIA, dead, 227 days 1601.2
L472 71 years, male, stage:Stage IB, dead, 423 days 1593.9
L442 75 years, female, stage:Stage IB, dead, 2433 days 1583.8
L633 77 years, female, stage:Stage IA, alive, 2102 days 1580.1
L685 71 years, female, stage:Stage IIB, alive, 1944 days 1531.4
L652 82 years, male, stage:Stage IA, dead, 5 days 1494.4
L644 67 years, male, stage:Stage IA, dead, 282 days 1492.6
L788 54 years, female, stage:Stage IA, alive, 3385 days 1487.0
L661 66 years, male, stage:Stage IA, dead, 1123 days 1484.5
L864 66 years, female, stage:Stage IA, alive, 2192 days 1464.5
L406 64 years, male, stage:Stage IA, alive, 3057 days 1422.9
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 1421.3
L658 65 years, female, stage:Stage IIB, alive, 2083 days 1420.8
L758 84 years, male, stage:Stage IA, dead, 1562 days 1392.3
L860 77 years, male, stage:Stage IA, alive, 2056 days 1310.5
L747 74 years, female, stage:Stage IA, dead, 1112 days 1188.9
L756 72 years, male, stage:Stage IB, alive, 1796 days 1088.0
L760 80 years, male, stage:Stage IIA, alive, 1895 days 1055.6
L719 63 years, male, stage:Stage IB, alive, 1615 days 1038.5
L572 58 years, male, stage:Stage IA, alive, 2532 days 981.4
L858 69 years, female, stage:Stage IIB, dead, 558 days 968.4
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 913.2
L884 71 years, male, stage:Stage IIA, alive, 1627 days 801.4
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0090340003 Tumor 0.8
CPT0118340003 Tumor 0.6
CPT0125810003 Tumor 0.6
CPT0104750003 Tumor 0.5
CPT0091860003 Tumor 0.5
CPT0063810003 Tumor 0.5
CPT0001660013 Tumor 0.4
CPT0001060010 Tumor 0.4
CPT0105940003 Tumor 0.4
CPT0068800003 Tumor 0.4
CPT0147480004 Tumor 0.4
CPT0069700003 Tumor 0.4
CPT0067450003 Tumor 0.4
CPT0086750003 Tumor 0.4
CPT0079830003 Tumor 0.4
CPT0092250003 Normal 0.4
CPT0015410003 Tumor 0.3
CPT0090170004 Tumor 0.3
CPT0083780003 Tumor 0.3
CPT0090700003 Tumor 0.3
CPT0053040004 Tumor 0.3
CPT0089340003 Tumor 0.3
CPT0000920017 Tumor 0.3
CPT0086320003 Normal 0.3
CPT0011750003 Normal 0.3
CPT0098130003 Tumor 0.3
CPT0112060003 Tumor 0.3
CPT0084140003 Tumor 0.3
CPT0092930003 Tumor 0.3
CPT0105710003 Tumor 0.3
CPT0114690003 Normal 0.3
CPT0114660004 Tumor 0.3
CPT0146780004 Tumor 0.2
CPT0066780003 Tumor 0.2
CPT0067070003 Tumor 0.2
CPT0114010003 Normal 0.2
CPT0001960003 Tumor 0.2
CPT0113210003 Tumor 0.2
CPT0118200003 Tumor 0.2
CPT0011930003 Normal 0.2
CPT0147900003 Normal 0.2
CPT0106110003 Tumor 0.2
CPT0109740004 Tumor 0.2
CPT0001390003 Normal 0.2
CPT0063750003 Normal 0.2
CPT0147380004 Tumor 0.2
CPT0113990003 Tumor 0.2
CPT0092240003 Tumor 0.2
CPT0148000003 Normal 0.2
CPT0067250003 Tumor 0.2
CPT0146700003 Normal 0.2
CPT0086310003 Tumor 0.2
CPT0021450003 Tumor 0.2
CPT0091240003 Tumor 0.2
CPT0118620003 Tumor 0.2
CPT0110860004 Tumor 0.2
CPT0069360003 Tumor 0.2
CPT0063730003 Tumor 0.1
CPT0082740004 Tumor 0.1
CPT0105630003 Tumor 0.1
CPT0109830004 Tumor 0.1
CPT0147500003 Normal 0.1
CPT0147600003 Normal 0.1
CPT0115070003 Tumor 0.1
CPT0090200003 Normal 0.1
CPT0102450003 Tumor 0.1
CPT0001590003 Normal 0.1
CPT0147980004 Tumor 0.1
CPT0052170004 Tumor 0.1
CPT0086770003 Normal 0.1
CPT0070060003 Tumor 0.1
CPT0104650003 Normal 0.1
CPT0097580003 Tumor 0.1
CPT0092940003 Normal 0.1
CPT0146980004 Tumor 0.1
CPT0066890003 Tumor 0.1
CPT0147080004 Tumor 0.1
CPT0147000003 Normal 0.1
CPT0013880003 Tumor 0.1
CPT0023310003 Tumor 0.1
CPT0008410003 Tumor 0.1
CPT0068100003 Tumor 0.1
CPT0001580009 Tumor 0.1
CPT0001070003 Normal 0.1
CPT0090570004 Tumor 0.1
CPT0109850003 Normal 0.1
CPT0014260003 Tumor 0.1
CPT0104630003 Tumor 0.0
CPT0118570003 Tumor 0.0
CPT0069520003 Tumor 0.0
CPT0090860003 Tumor 0.0
CPT0067110003 Normal 0.0
CPT0105060003 Tumor 0.0
CPT0083140003 Normal 0.0
CPT0068650003 Normal 0.0
CPT0109710003 Normal 0.0
CPT0083100003 Tumor 0.0
CPT0105230003 Tumor 0.0
CPT0148300003 Normal 0.0
CPT0105330003 Tumor 0.0
CPT0082850004 Tumor 0.0
CPT0063840003 Normal 0.0
CPT0052940004 Tumor 0.0
CPT0110980004 Tumor 0.0
CPT0097600003 Normal 0.0
CPT0055100004 Tumor 0.0
CPT0113220003 Normal 0.0
CPT0068610003 Tumor 0.0
CPT0109680004 Tumor 0.0
CPT0118810003 Tumor 0.0
CPT0008450003 Tumor 0.0
CPT0111590003 Normal 0.0
CPT0118160003 Tumor 0.0
CPT0069370003 Normal 0.0
CPT0067940003 Tumor 0.0
CPT0104970003 Tumor 0.0
CPT0066810003 Normal 0.0
CPT0117970003 Tumor 0.0
CPT0146680004 Tumor -0.1
CPT0013630003 Normal -0.1
CPT0105600003 Tumor -0.1
CPT0147100003 Normal -0.1
CPT0146800003 Normal -0.1
CPT0105510003 Tumor -0.1
CPT0105680003 Normal -0.1
CPT0146880004 Tumor -0.1
CPT0014290003 Normal -0.1
CPT0110890003 Normal -0.1
CPT0148100003 Normal -0.1
CPT0114840003 Tumor -0.1
CPT0000930003 Normal -0.1
CPT0067620003 Tumor -0.1
CPT0114880003 Normal -0.1
CPT0011710004 Tumor -0.1
CPT0118010003 Normal -0.1
CPT0089360003 Normal -0.1
CPT0118360003 Normal -0.1
CPT0111300003 Tumor -0.1
CPT0090600003 Normal -0.1
CPT0014930003 Normal -0.1
CPT0067950003 Normal -0.1
CPT0118600003 Normal -0.1
CPT0082770003 Normal -0.1
CPT0118880003 Tumor -0.1
CPT0105370004 Normal -0.1
CPT0146600003 Normal -0.1
CPT0013600003 Tumor -0.2
CPT0147880004 Tumor -0.2
CPT0062810003 Normal -0.2
CPT0069550003 Normal -0.2
CPT0105270003 Tumor -0.2
CPT0015420003 Normal -0.2
CPT0104760003 Normal -0.2
CPT0105980003 Normal -0.2
CPT0067290003 Normal -0.2
CPT0118890003 Normal -0.2
CPT0105550003 Normal -0.2
CPT0091870003 Normal -0.2
CPT0001380003 Tumor -0.2
CPT0148200003 Normal -0.2
CPT0148180004 Tumor -0.2
CPT0001970003 Normal -0.2
CPT0051690004 Tumor -0.2
CPT0118240003 Normal -0.2
CPT0106100003 Normal -0.2
CPT0023320003 Normal -0.2
CPT0111480003 Normal -0.2
CPT0068130003 Normal -0.2
CPT0147400003 Normal -0.2
CPT0001800013 Tumor -0.2
CPT0102480003 Normal -0.2
CPT0090720003 Normal -0.2
CPT0092530003 Tumor -0.2
CPT0082890003 Normal -0.2
CPT0008420003 Normal -0.2
CPT0083390004 Tumor -0.2
CPT0105010004 Normal -0.2
CPT0014860003 Tumor -0.2
CPT0105740003 Normal -0.3
CPT0084170003 Normal -0.3
CPT0068830003 Normal -0.3
CPT0066930003 Normal -0.3
CPT0091260003 Normal -0.3
CPT0105610003 Normal -0.3
CPT0001810003 Normal -0.3
CPT0001690003 Normal -0.3
CPT0090370003 Normal -0.3
CPT0118180003 Normal -0.3
CPT0067470004 Normal -0.3
CPT0112080003 Normal -0.3
CPT0105250003 Normal -0.3
CPT0118650003 Normal -0.3
CPT0109760003 Normal -0.3
CPT0105190003 Normal -0.3
CPT0115090003 Normal -0.4
CPT0109700003 Normal -0.4
CPT0067770003 Normal -0.4
CPT0011910004 Tumor -0.4
CPT0083420003 Normal -0.4
CPT0118830003 Normal -0.4
CPT0013910003 Normal -0.5
CPT0147580004 Tumor -0.5
CPT0109720004 Tumor -0.5
CPT0148280004 Tumor -0.5
CPT0079850003 Normal -0.5
CPT0070080003 Normal -0.6
CPT0083810003 Normal -0.6
CPT0069720003 Normal -0.6
CPT0021490003 Normal -0.7
CPT0125830003 Normal -0.8
CPT0090900004 Normal -0.8
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0063430003 Tumor 0.9
CPT0191710003 Tumor 0.7
CPT0090440003 Tumor 0.5
CPT0112540003 Tumor 0.5
CPT0087190003 Tumor 0.5
CPT0112580003 Tumor 0.5
CPT0111150004 Tumor 0.5
CPT0236420003 Tumor 0.5
CPT0175390003 Tumor 0.5
CPT0147680004 Tumor 0.5
CPT0237780003 Normal 0.5
CPT0192540004 Tumor 0.4
CPT0204990003 Tumor 0.4
CPT0175260003 Tumor 0.4
CPT0202170003 Tumor 0.4
CPT0130030003 Tumor 0.4
CPT0079100003 Tumor 0.4
CPT0223820003 Normal 0.4
CPT0197150003 Tumor 0.4
CPT0218310003 Normal 0.4
CPT0217420003 Tumor 0.4
CPT0237200004 Tumor 0.3
CPT0112600003 Normal 0.3
CPT0112550003 Normal 0.3
CPT0197090003 Tumor 0.3
CPT0186130003 Tumor 0.3
CPT0136640003 Tumor 0.3
CPT0079050003 Tumor 0.3
CPT0146480004 Tumor 0.3
CPT0219360003 Tumor 0.3
CPT0086260003 Tumor 0.3
CPT0146380004 Tumor 0.3
CPT0083980003 Tumor 0.3
CPT0068280003 Tumor 0.3
CPT0091820003 Tumor 0.3
CPT0209020004 Tumor 0.3
CPT0175120003 Tumor 0.3
CPT0175410003 Normal 0.3
CPT0007740003 Tumor 0.2
CPT0202020008 Tumor 0.2
CPT0208770003 Tumor 0.2
CPT0126470003 Normal 0.2
CPT0130270003 Tumor 0.2
CPT0010060003 Normal 0.2
CPT0147700003 Normal 0.2
CPT0237060004 Tumor 0.2
CPT0104380003 Normal 0.2
CPT0221660003 Normal 0.2
CPT0190550003 Tumor 0.2
CPT0237550004 Tumor 0.2
CPT0146400003 Normal 0.2
CPT0186210003 Normal 0.2
CPT0186180003 Tumor 0.2
CPT0233600003 Tumor 0.2
CPT0197740003 Tumor 0.1
CPT0233640003 Normal 0.1
CPT0227400003 Tumor 0.1
CPT0112730003 Normal 0.1
CPT0237710003 Normal 0.1
CPT0108560003 Tumor 0.1
CPT0112650003 Tumor 0.1
CPT0234790003 Tumor 0.1
CPT0205000003 Normal 0.1
CPT0236430003 Normal 0.1
CPT0245790003 Normal 0.1
CPT0001020003 Tumor 0.1
CPT0245830003 Tumor 0.1
CPT0007760003 Normal 0.1
CPT0136660003 Normal 0.1
CPT0204800003 Tumor 0.1
CPT0218280003 Tumor 0.1
CPT0197210003 Tumor 0.1
CPT0234560003 Tumor 0.1
CPT0063480003 Tumor 0.1
CPT0126810003 Tumor 0.1
CPT0128890003 Tumor 0.1
CPT0237210003 Normal 0.1
CPT0223790003 Tumor 0.1
CPT0098770003 Tumor 0.1
CPT0237970004 Tumor 0.1
CPT0237760003 Tumor 0.1
CPT0104360003 Tumor 0.1
CPT0195510003 Tumor 0.1
CPT0115860003 Normal 0.1
CPT0146500003 Normal 0.1
CPT0227420003 Normal 0.1
CPT0196810003 Tumor 0.1
CPT0187370003 Tumor 0.1
CPT0089880003 Tumor 0.1
CPT0217490003 Normal 0.0
CPT0111000004 Normal 0.0
CPT0237570003 Normal 0.0
CPT0191860003 Tumor 0.0
CPT0237690004 Tumor 0.0
CPT0234930004 Tumor 0.0
CPT0241170003 Tumor 0.0
CPT0233320003 Tumor 0.0
CPT0197860003 Normal 0.0
CPT0197480003 Tumor 0.0
CPT0175270003 Normal 0.0
CPT0237080003 Normal 0.0
CPT0112720003 Tumor 0.0
CPT0202740003 Normal 0.0
CPT0112660003 Normal 0.0
CPT0245840003 Normal 0.0
CPT0187380003 Normal 0.0
CPT0183250004 Tumor 0.0
CPT0104950003 Normal 0.0
CPT0123370003 Normal 0.0
CPT0183270003 Normal 0.0
CPT0219390003 Normal 0.0
CPT0086270003 Normal 0.0
CPT0115830003 Tumor 0.0
CPT0105420003 Tumor 0.0
CPT0209040003 Normal 0.0
CPT0221200003 Tumor 0.0
CPT0197380003 Normal 0.0
CPT0130070003 Normal 0.0
CPT0202720003 Tumor 0.0
CPT0091050003 Tumor 0.0
CPT0208780003 Normal -0.1
CPT0091610003 Tumor -0.1
CPT0063440003 Normal -0.1
CPT0245890003 Normal -0.1
CPT0238130003 Normal -0.1
CPT0087210003 Normal -0.1
CPT0023500003 Normal -0.1
CPT0102840003 Normal -0.1
CPT0202350004 Tumor -0.1
CPT0123350003 Tumor -0.1
CPT0130410003 Tumor -0.1
CPT0202220004 Normal -0.1
CPT0238110004 Tumor -0.1
CPT0104930003 Tumor -0.1
CPT0091620003 Normal -0.1
CPT0126530003 Tumor -0.1
CPT0227070003 Normal -0.1
CPT0232670003 Tumor -0.1
CPT0147180004 Tumor -0.1
CPT0195520003 Normal -0.1
CPT0126390003 Tumor -0.1
CPT0063500003 Normal -0.1
CPT0221220003 Normal -0.1
CPT0241210003 Normal -0.1
CPT0191930003 Normal -0.1
CPT0221650003 Tumor -0.1
CPT0197170003 Normal -0.1
CPT0126830003 Normal -0.1
CPT0207210003 Tumor -0.1
CPT0128900003 Normal -0.1
CPT0101130003 Tumor -0.1
CPT0222730003 Tumor -0.1
CPT0209510003 Normal -0.1
CPT0079060003 Normal -0.1
CPT0069890003 Tumor -0.1
CPT0204660003 Normal -0.1
CPT0064040003 Tumor -0.1
CPT0001030003 Normal -0.2
CPT0126760003 Normal -0.2
CPT0010050003 Tumor -0.2
CPT0102790003 Tumor -0.2
CPT0108600003 Normal -0.2
CPT0191750003 Normal -0.2
CPT0234820003 Normal -0.2
CPT0126450003 Tumor -0.2
CPT0079110003 Normal -0.2
CPT0245880003 Tumor -0.2
CPT0091090003 Normal -0.2
CPT0197520003 Normal -0.2
CPT0225380003 Tumor -0.2
CPT0098800003 Normal -0.2
CPT0202530004 Tumor -0.2
CPT0245780003 Tumor -0.2
CPT0130440004 Normal -0.2
CPT0126400003 Normal -0.2
CPT0186140003 Normal -0.2
CPT0237410004 Tumor -0.3
CPT0202040003 Normal -0.3
CPT0068320003 Normal -0.3
CPT0023470003 Tumor -0.3
CPT0130310003 Normal -0.3
CPT0237430003 Normal -0.3
CPT0233160003 Normal -0.3
CPT0234580003 Normal -0.3
CPT0175560003 Tumor -0.3
CPT0105430003 Normal -0.3
CPT0126740003 Tumor -0.3
CPT0222740003 Normal -0.3
CPT0233120003 Tumor -0.3
CPT0237990003 Normal -0.3
CPT0232690003 Normal -0.3
CPT0225470003 Normal -0.3
CPT0204600003 Tumor -0.3
CPT0147200003 Normal -0.3
CPT0117720003 Tumor -0.4
CPT0207250003 Normal -0.4
CPT0175160003 Normal -0.4
CPT0196820003 Normal -0.4
CPT0126670003 Tumor -0.4
CPT0202400004 Normal -0.4
CPT0083990003 Normal -0.4
CPT0202580004 Normal -0.4
CPT0227020003 Tumor -0.4
CPT0064050003 Normal -0.4
CPT0233330003 Normal -0.5
CPT0197100003 Normal -0.5
CPT0204820003 Normal -0.5
CPT0209490003 Tumor -0.6
CPT0192590004 Normal -0.6
CPT0117770003 Normal -0.7
CPT0234950004 Normal -0.8
CPT0069900003 Normal -1.0
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA072263
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS

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