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  • MBD3
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:55.0 nTPM
HPA Brain:26.2 nTPM
GTEx:55.0 nTPM
FANTOM5:20.8 Scaled Tags Per Million
Pig:45.6 nTPM
Mouse:143.0 nTPM
Allen mouse:14.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB013265
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 21.2
2289 Male, age 61, right hemisphere 24.2
1781 Male, age 74, unknown 23.6
1854 Male, age 80, left hemisphere 21.9
2846 Female, age 79, unknown 21.8
2290 Female, age 72, unknown 21.3
2288 Male, age 75, left hemisphere 19.3
1857 Female, age 85, left hemisphere 19.2
2481 Female, age 94, left hemisphere 18.3
Globus pallidus, externus
nTPM: 26.2
2567 Female, age 72, unknown 38.6
2646 Male, age 61, right hemisphere 28.4
2772 Female, age 79, unknown 22.1
1996 Male, age 80, right hemisphere 21.4
2395 Male, age 75, both hemispheres 20.5
Globus pallidus, internus
nTPM: 23.5
2566 Female, age 72, unknown 31.5
2111 Female, age 85, right hemisphere 28.4
1818 Male, age 74, unknown 25.7
2483 Female, age 94, right hemisphere 22.2
2778 Female, age 91, both hemispheres 21.2
2037 Male, age 80, right hemisphere 19.9
2287 Male, age 75, right hemisphere 15.9
Nucleus accumbens
nTPM: 21.4
1783 Male, age 74, unknown 26.7
1856 Female, age 91, right hemisphere 24.2
2824 Male, age 61, right hemisphere 22.5
2732 Male, age 80, right hemisphere 22.4
2391 Female, age 94, left hemisphere 20.1
1806 Female, age 85, left hemisphere 19.5
2286 Male, age 75, left hemisphere 18.5
2698 Female, age 72, unknown 17.2
Nucleus basalis of Meynert
nTPM: 24.4
2569 Male, age 61, both hemispheres 28.2
2821 Male, age 75, both hemispheres 23.2
2484 Female, age 94, left hemisphere 23.1
2393 Male, age 80, right hemisphere 23.0
Nucleus of the diagonal band
nTPM: 21.3
2029 Male, age 61, right hemisphere 25.0
1812 Female, age 91, both hemispheres 22.4
2775 Male, age 80, right hemisphere 20.7
1979 Male, age 74, unknown 20.0
2195 Female, age 85, both hemispheres 18.6
Putamen
nTPM: 26.0
2647 Male, age 75, left hemisphere 34.3
2489 Female, age 72, unknown 30.0
1829 Male, age 74, unknown 28.2
2466 Female, age 79, unknown 27.2
2482 Female, age 94, left hemisphere 21.0
1838 Male, age 80, right hemisphere 20.8
1937 Female, age 91, right hemisphere 20.3
Septal nuclei
nTPM: 21.7
2059 Female, age 85, both hemispheres 27.6
2394 Male, age 61, left hemisphere 23.3
2199 Male, age 80, right hemisphere 21.2
1960 Male, age 74, unknown 20.8
2629 Female, age 94, right hemisphere 20.7
2009 Female, age 91, both hemispheres 20.3
2031 Female, age 72, unknown 18.3
Stria terminalis, bed nucleus
nTPM: 20.0
2201 Male, age 74, unknown 20.7
2486 Female, age 94, both hemispheres 20.0
1974 Female, age 91, both hemispheres 19.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 50.5
Samples: 246

Max nTPM: 104.7
Min nTPM: 17.2
Std nTPM: 11.8
Median nTPM: 49.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 104.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 93.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 81.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 81.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 78.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 77.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 76.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 75.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 75.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 72.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 71.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 70.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 70.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 69.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 69.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 69.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 69.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 68.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 68.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 67.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 65.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 65.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 64.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 64.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 64.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 64.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 64.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 63.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 63.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 62.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 62.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 62.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 61.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 61.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 61.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 61.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 60.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 60.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 60.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 60.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 59.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 59.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 59.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 59.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 58.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 58.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 58.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 58.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 57.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 57.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 57.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 56.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 56.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 56.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 56.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 56.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 56.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 56.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 56.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 56.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 55.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 55.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 55.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 55.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 55.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 55.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 54.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 54.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 53.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 53.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 53.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 53.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 53.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 53.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 53.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 53.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 53.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 52.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 52.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 52.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 52.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 52.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 51.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 51.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 51.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 51.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 51.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 51.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 51.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 50.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 50.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 50.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 50.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 50.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 50.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 50.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 50.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 50.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 50.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 50.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 50.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 50.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 50.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 49.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 49.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 49.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 49.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 49.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 49.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 49.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 49.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 49.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 49.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 48.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 48.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 48.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 48.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 48.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 48.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 48.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 48.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 48.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 48.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 48.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 48.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 47.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 47.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 47.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 47.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 47.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 47.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 47.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 47.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 47.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 47.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 46.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 46.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 46.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 46.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 46.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 46.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 46.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 46.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 46.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 46.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 45.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 45.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 45.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 45.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 45.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 45.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 44.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 44.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 44.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 43.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 43.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 43.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 43.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 43.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 43.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 43.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 43.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 43.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 42.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 42.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 42.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 41.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 41.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 41.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 41.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 41.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 41.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 40.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 40.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 40.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 40.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 39.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 39.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 39.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 39.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 38.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 38.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 38.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 37.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 37.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 37.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 36.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 36.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 36.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 36.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 35.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 35.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 35.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 35.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 35.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 33.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 32.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 31.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 31.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 31.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 31.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 29.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 29.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 28.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 27.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 24.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 17.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 51.0
Samples: 246

Max nTPM: 104.5
Min nTPM: 23.5
Std nTPM: 14.1
Median nTPM: 48.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 104.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 102.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 88.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 88.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 82.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 80.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 80.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 79.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 79.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 79.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 78.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 77.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 77.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 76.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 75.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 75.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 74.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 73.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 72.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 72.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 71.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 70.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 69.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 69.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 68.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 68.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 68.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 68.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 67.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 66.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 66.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 66.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 66.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 65.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 65.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 65.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 65.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 64.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 64.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 64.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 64.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 64.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 63.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 63.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 62.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 62.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 62.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 62.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 61.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 61.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 61.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 61.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 61.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 61.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 61.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 60.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 60.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 60.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 60.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 59.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 59.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 59.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 59.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 59.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 59.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 59.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 58.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 58.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 58.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 58.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 57.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 56.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 56.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 56.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 56.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 56.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 55.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 55.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 55.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 55.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 55.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 54.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 54.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 54.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 53.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 53.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 53.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 53.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 53.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 53.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 53.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 53.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 52.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 52.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 52.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 52.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 52.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 52.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 52.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 52.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 51.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 51.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 51.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 51.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 51.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 51.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 51.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 51.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 50.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 49.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 49.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 49.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 49.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 49.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 48.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 48.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 48.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 48.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 48.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 48.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 48.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 48.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 48.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 48.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 48.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 48.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 47.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 47.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 47.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 47.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 46.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 46.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 46.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 46.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 46.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 46.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 46.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 46.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 46.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 46.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 45.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 45.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 45.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 45.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 45.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 45.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 45.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 45.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 45.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 44.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 44.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 44.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 44.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 44.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 44.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 44.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 44.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 44.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 44.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 43.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 43.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 43.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 43.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 43.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 43.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 43.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 43.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 43.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 42.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 42.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 42.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 42.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 42.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 41.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 41.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 41.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 41.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 41.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 41.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 40.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 40.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 40.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 40.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 40.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 40.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 39.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 39.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 39.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 39.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 39.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 39.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 38.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 38.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 38.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 37.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 37.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 37.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 37.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 37.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 37.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 37.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 37.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 36.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 36.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 36.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 36.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 36.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 35.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 35.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 35.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 35.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 35.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 35.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 35.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 34.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 34.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 34.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 34.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 34.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 33.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 33.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 33.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 32.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 30.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 30.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 29.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 29.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 28.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 28.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 26.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 26.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 24.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 23.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 23.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 23.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 23.5
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Brain - Putamen (basal ganglia)
Average nTPM: 55.0
Samples: 205

Max nTPM: 110.7
Min nTPM: 27.1
Std nTPM: 12.3
Median nTPM: 53.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 110.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 86.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 86.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 84.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 82.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 80.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 80.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 80.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 80.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 78.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 78.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 78.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 76.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 74.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 74.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 74.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 73.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 73.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 72.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 72.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 71.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 71.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 71.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 71.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 70.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 70.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 70.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 70.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 69.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 69.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 67.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 66.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 65.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 65.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 65.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 64.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 64.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 64.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 64.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 64.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 64.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 63.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 63.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 63.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 62.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 62.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 62.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 62.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 62.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 62.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 61.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 61.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 61.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 60.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 60.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 60.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 60.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 60.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 60.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 59.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 59.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 59.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 58.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 58.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 58.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 58.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 58.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 58.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 58.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 57.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 57.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 57.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 57.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 56.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 56.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 56.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 56.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 56.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 56.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 55.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 55.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 55.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 55.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 55.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 55.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 55.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 54.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 54.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 54.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 54.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 54.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 53.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 53.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 53.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 52.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 52.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 52.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 51.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 51.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 51.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 51.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 51.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 51.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 51.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 51.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 51.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 50.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 50.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 50.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 50.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 50.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 50.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 50.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 49.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 49.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 49.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 49.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 49.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 48.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 48.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 48.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 48.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 48.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 48.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 48.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 48.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 47.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 47.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 47.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 46.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 46.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 46.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 46.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 45.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 45.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 45.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 44.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 44.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 44.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 44.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 43.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 43.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 43.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 43.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 43.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 43.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 43.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 43.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 42.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 42.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 42.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 42.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 42.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 42.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 42.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 42.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 41.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 41.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 41.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 41.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 41.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 40.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 40.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 40.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 39.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 39.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 39.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 39.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 39.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 38.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 36.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 34.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 34.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 32.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 31.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 28.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 27.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 20.8
FF:10164-103B2 76 years, female 20.8
Nucleus accumbens
Scaled Tags Per Million: 14.2
FF:10037-101F1 23-56 years, mixed 14.2
Putamen
Scaled Tags Per Million: 11.5
FF:10176-103C5 60 years, female 11.5
Globus pallidus
Scaled Tags Per Million: 16.4
FF:10161-103A8 76 years, female 22.7
FF:10175-103C4 60 years, female 10.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.6
Pig sample Sample description nTPM
Caudate
nTPM: 40.2
Samples: 4

Max nTPM: 48.9
Min nTPM: 33.0
Sample A Female 33.0
Sample B Female 43.0
Sample C Male 48.9
Sample D Male 36.0
Putamen
nTPM: 45.6
Samples: 4

Max nTPM: 54.1
Min nTPM: 36.7
Sample A Female 44.2
Sample B Female 36.7
Sample C Male 54.1
Sample D Male 47.2
Septum
nTPM: 37.1
Samples: 4

Max nTPM: 42.1
Min nTPM: 27.9
Sample A Female 40.9
Sample B Female 37.3
Sample C Male 42.1
Sample D Male 27.9
Ventral pallidum
nTPM: 40.4
Samples: 4

Max nTPM: 53.0
Min nTPM: 32.8
Sample A Female 32.8
Sample B Female 38.7
Sample C Male 53.0
Sample D Male 37.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 143.0
Samples: 4

Max nTPM: 164.1
Min nTPM: 131.2
Sample A Male 131.2
Sample B Male 164.1
Sample C Female 134.4
Sample D Female 142.4
Septum
nTPM: 114.3
Samples: 4

Max nTPM: 122.4
Min nTPM: 105.6
Sample A Male 122.4
Sample B Male 119.7
Sample C Female 109.6
Sample D Female 105.6
Ventral forebrain
nTPM: 133.7
Samples: 4

Max nTPM: 142.7
Min nTPM: 125.3
Sample A Male 140.3
Sample B Male 126.3
Sample C Female 142.7
Sample D Female 125.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.3
69080515 Antisense, RP_050324_02_C04, Mouse strain C57BL/6J (56 days, male) 14.3
Pallidum
Expression energy: 13.8
69080515 Antisense, RP_050324_02_C04, Mouse strain C57BL/6J (56 days, male) 13.8

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