We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CYBRD1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CYBRD1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CYBRD1
Synonyms CYB561A2, DCYTB, FLJ23462, FRRS3
Gene descriptioni

Full gene name according to HGNC.

Cytochrome b reductase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q31.1
Chromosome location (bp) 171522247 - 171558129
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000071967 (version 109)
Entrez gene 79901
HGNC HGNC:20797
UniProt Q53TN4 (UniProt - Evidence at protein level)
neXtProt NX_Q53TN4
GeneCards CYBRD1
Antibodypedia CYBRD1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plasma membrane reductase that uses cytoplasmic ascorbate as an electron donor to reduce extracellular Fe(3+) into Fe(2+) 1. Probably functions in dietary iron absorption at the brush border of duodenal enterocytes by producing Fe(2+), the divalent form of iron that can be transported into enterocytes 2. It is also able to reduce extracellular monodehydro-L-ascorbate and may be involved in extracellular ascorbate regeneration by erythrocytes in blood 3. May also act as a ferrireductase in airway epithelial cells (Probable). May also function as a cupric transmembrane reductase (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Oxidoreductase, Translocase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Electron transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Heme, Iron, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is a member of the cytochrome b(561) family that encodes an iron-regulated protein. It highly expressed in the duodenal brush border membrane. It has ferric reductase activity and is believed to play a physiological role in dietary iron absorption. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CYBRD1-201
ENSP00000319141
ENST00000321348
Q53TN4
[Direct mapping] Plasma membrane ascorbate-dependent reductase CYBRD1
Show all
Enzymes
   ENZYME proteins
Metabolic proteins
Transporters
   Transport Electron Carriers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006879 [cellular iron ion homeostasis]
GO:0010039 [response to iron ion]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016491 [oxidoreductase activity]
GO:0016722 [oxidoreductase activity, acting on metal ions]
GO:0031526 [brush border membrane]
GO:0033215 [reductive iron assimilation]
GO:0042802 [identical protein binding]
GO:0046872 [metal ion binding]
GO:0055072 [iron ion homeostasis]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0140571 [transmembrane ascorbate ferrireductase activity]
GO:0140575 [transmembrane monodehydroascorbate reductase activity]
GO:0140576 [ascorbate homeostasis]
Show all
286 aa
31.6 kDa
No 6
CYBRD1-202
ENSP00000364401
ENST00000375252
Q53TN4
[Direct mapping] Plasma membrane ascorbate-dependent reductase CYBRD1
Show all
Enzymes
   ENZYME proteins
Metabolic proteins
Transporters
   Transport Electron Carriers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006879 [cellular iron ion homeostasis]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016491 [oxidoreductase activity]
GO:0016722 [oxidoreductase activity, acting on metal ions]
GO:0031526 [brush border membrane]
GO:0033215 [reductive iron assimilation]
GO:0042802 [identical protein binding]
GO:0046872 [metal ion binding]
GO:0055072 [iron ion homeostasis]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0140571 [transmembrane ascorbate ferrireductase activity]
GO:0140575 [transmembrane monodehydroascorbate reductase activity]
GO:0140576 [ascorbate homeostasis]
Show all
157 aa
17.9 kDa
No 2
CYBRD1-203
ENSP00000386739
ENST00000409484
Q53TN4
[Direct mapping] Plasma membrane ascorbate-dependent reductase CYBRD1
Show all
Enzymes
   ENZYME proteins
Metabolic proteins
Transporters
   Transport Electron Carriers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006879 [cellular iron ion homeostasis]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016491 [oxidoreductase activity]
GO:0016722 [oxidoreductase activity, acting on metal ions]
GO:0031526 [brush border membrane]
GO:0033215 [reductive iron assimilation]
GO:0042802 [identical protein binding]
GO:0046872 [metal ion binding]
GO:0055072 [iron ion homeostasis]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0140571 [transmembrane ascorbate ferrireductase activity]
GO:0140575 [transmembrane monodehydroascorbate reductase activity]
GO:0140576 [ascorbate homeostasis]
Show all
228 aa
25.1 kDa
No 4
CYBRD1-204
ENSP00000402242
ENST00000445146
C9JML1
[Direct mapping] Plasma membrane ascorbate-dependent reductase CYBRD1
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005886 [plasma membrane]
GO:0006879 [cellular iron ion homeostasis]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016491 [oxidoreductase activity]
GO:0016722 [oxidoreductase activity, acting on metal ions]
GO:0046872 [metal ion binding]
GO:0055085 [transmembrane transport]
GO:0140571 [transmembrane ascorbate ferrireductase activity]
Show all
174 aa
19.2 kDa
No 5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org