We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
42.0
nTPM
HPA Brain:
79.5
nTPM
GTEx:
42.0
nTPM
FANTOM5:
82.4
Scaled Tags Per Million
Pig:
28.0
nTPM
Mouse:
22.7
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
79.5
Sample id
Sample description
nTPM
Amygdala nTPM: 73.1
2695
Female, age 67, right hemisphere
82.4
2514
Male, age 75, right hemisphere
75.9
1987
Female, age 91, left hemisphere
73.0
2517
Female, age 94, left hemisphere
68.3
2814
Male, age 76, right hemisphere
65.9
Basal amygdala nTPM: 71.0
2609
Male, age 75, right hemisphere
90.0
2243
Female, age 91, right hemisphere
73.2
2685
Female, age 94, left hemisphere
72.4
2110
Male, age 80, left hemisphere
72.0
2827
Female, age 67, right hemisphere
67.1
1955
Male, age 76, both hemispheres
51.2
Central amygdala nTPM: 79.5
2701
Female, age 91, right hemisphere
103.9
2515
Male, age 75, right hemisphere
103.1
2239
Male, age 80, left hemisphere
88.1
1905
Male, age 76, both hemispheres
51.8
2826
Female, age 94, left hemisphere
50.5
Corticomedial amygdala nTPM: 63.8
2829
Male, age 80, left hemisphere
78.4
2429
Female, age 94, left hemisphere
68.8
2242
Female, age 91, right hemisphere
68.0
2428
Male, age 75, right hemisphere
62.2
2535
Female, age 67, right hemisphere
59.8
2240
Male, age 76, both hemispheres
45.5
Lateral amygdala nTPM: 74.8
2256
Male, age 80, left hemisphere
99.8
2255
Female, age 91, right hemisphere
97.3
2516
Male, age 75, right hemisphere
72.3
2830
Female, age 67, right hemisphere
68.1
2534
Female, age 94, left hemisphere
59.4
1883
Male, age 76, both hemispheres
51.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 42.0
Samples: 152
Max nTPM: 110.0
Min nTPM: 6.9
Std nTPM: 19.5
Median nTPM: 39.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
110.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
108.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
93.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
84.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
82.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
80.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
78.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
76.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
74.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
74.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
73.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
70.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
69.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
68.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
67.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
67.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
67.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
66.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
65.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
63.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
63.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
61.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
60.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
59.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
59.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
58.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
57.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
57.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
57.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
56.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
56.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
56.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
55.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
55.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
55.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
54.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
54.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
53.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
53.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
53.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
52.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
52.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
52.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
51.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
51.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
51.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
51.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
50.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
49.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
49.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
49.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
49.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
48.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
48.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
47.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
47.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
47.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
46.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
46.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
45.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
45.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
44.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
44.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
43.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
43.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
43.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
42.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
42.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
42.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
41.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
41.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
41.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
40.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
39.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
39.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
39.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
39.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
38.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
38.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
38.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
38.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
37.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
37.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
37.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
37.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
37.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
36.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
36.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
36.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
36.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
36.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
36.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
35.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
35.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
35.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
35.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
35.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
34.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
34.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
34.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
33.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
33.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
32.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
32.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
32.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
31.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
31.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
30.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
30.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
30.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
30.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
30.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
28.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
28.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
28.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
28.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
27.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
26.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
26.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
25.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
23.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
22.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
22.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
22.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
21.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
20.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
20.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
20.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
20.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
20.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
19.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
19.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
19.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
18.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
18.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
17.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
16.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
16.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
16.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
15.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
14.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
14.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
13.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
13.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
13.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
12.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
12.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
11.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
11.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
8.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
6.9
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
22.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 22.7
Samples: 4
Max nTPM: 24.7
Min nTPM: 20.5
Sample A
Male
24.7
Sample B
Male
22.3
Sample C
Female
23.2
Sample D
Female
20.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
