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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:47.7 nTPM
HPA Brain:51.3 nTPM
GTEx:47.7 nTPM
FANTOM5:296.5 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:28.7 nTPM
Allen mouse:1.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA072449Antibody CAB070124
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 46.5
2846 Female, age 79, unknown 68.5
2289 Male, age 61, right hemisphere 57.3
2290 Female, age 72, unknown 52.5
1857 Female, age 85, left hemisphere 49.1
1781 Male, age 74, unknown 40.5
2288 Male, age 75, left hemisphere 39.6
2481 Female, age 94, left hemisphere 32.8
1854 Male, age 80, left hemisphere 31.6
Globus pallidus, externus
nTPM: 17.6
2646 Male, age 61, right hemisphere 29.2
2567 Female, age 72, unknown 17.7
2395 Male, age 75, both hemispheres 15.3
1996 Male, age 80, right hemisphere 13.1
2772 Female, age 79, unknown 12.6
Globus pallidus, internus
nTPM: 19.6
2483 Female, age 94, right hemisphere 32.4
2778 Female, age 91, both hemispheres 21.7
2287 Male, age 75, right hemisphere 20.0
2111 Female, age 85, right hemisphere 17.8
2037 Male, age 80, right hemisphere 16.6
2566 Female, age 72, unknown 16.2
1818 Male, age 74, unknown 12.3
Nucleus accumbens
nTPM: 28.4
1783 Male, age 74, unknown 41.4
1806 Female, age 85, left hemisphere 34.4
2698 Female, age 72, unknown 30.4
1856 Female, age 91, right hemisphere 28.5
2286 Male, age 75, left hemisphere 27.4
2391 Female, age 94, left hemisphere 25.2
2824 Male, age 61, right hemisphere 24.9
2732 Male, age 80, right hemisphere 15.3
Nucleus basalis of Meynert
nTPM: 35.3
2484 Female, age 94, left hemisphere 52.1
2393 Male, age 80, right hemisphere 33.3
2569 Male, age 61, both hemispheres 31.5
2821 Male, age 75, both hemispheres 24.3
Nucleus of the diagonal band
nTPM: 13.5
2195 Female, age 85, both hemispheres 17.8
1979 Male, age 74, unknown 15.7
2775 Male, age 80, right hemisphere 11.6
2029 Male, age 61, right hemisphere 11.5
1812 Female, age 91, both hemispheres 10.8
Putamen
nTPM: 51.3
2466 Female, age 79, unknown 72.0
2489 Female, age 72, unknown 66.8
1829 Male, age 74, unknown 63.7
1838 Male, age 80, right hemisphere 46.6
2482 Female, age 94, left hemisphere 42.9
2647 Male, age 75, left hemisphere 37.9
1937 Female, age 91, right hemisphere 29.2
Septal nuclei
nTPM: 14.5
2059 Female, age 85, both hemispheres 18.3
1960 Male, age 74, unknown 17.7
2031 Female, age 72, unknown 16.3
2629 Female, age 94, right hemisphere 13.5
2199 Male, age 80, right hemisphere 12.7
2394 Male, age 61, left hemisphere 12.6
2009 Female, age 91, both hemispheres 10.5
Stria terminalis, bed nucleus
nTPM: 13.8
2201 Male, age 74, unknown 15.6
2486 Female, age 94, both hemispheres 14.2
1974 Female, age 91, both hemispheres 11.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 41.6
Samples: 246

Max nTPM: 99.3
Min nTPM: 13.9
Std nTPM: 11.1
Median nTPM: 41.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 99.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 66.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 65.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 63.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 63.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 62.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 61.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 61.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 61.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 60.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 60.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 59.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 59.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 57.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 57.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 57.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 57.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 56.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 56.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 55.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 55.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 55.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 55.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 54.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 53.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 53.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 53.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 52.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 52.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 51.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 51.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 51.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 51.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 51.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 50.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 50.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 50.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 50.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 50.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 50.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 50.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 50.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 50.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 50.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 49.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 49.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 49.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 49.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 48.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 48.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 48.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 48.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 48.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 48.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 48.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 48.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 47.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 47.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 47.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 47.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 47.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 46.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 46.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 46.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 46.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 46.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 45.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 45.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 45.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 45.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 45.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 45.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 45.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 45.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 45.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 45.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 45.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 45.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 44.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 44.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 44.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 44.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 43.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 43.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 43.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 43.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 42.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 42.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 42.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 42.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 42.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 42.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 42.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 41.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 41.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 41.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 41.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 40.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 40.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 40.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 40.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 40.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 40.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 40.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 40.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 40.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 40.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 39.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 39.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 39.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 39.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 39.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 39.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 39.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 39.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 38.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 38.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 38.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 38.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 38.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 37.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 37.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 37.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 37.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 37.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 37.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 37.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 37.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 36.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 36.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 36.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 36.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 36.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 35.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 35.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 35.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 35.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 35.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 35.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 35.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 35.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 35.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 34.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 34.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 34.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 34.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 34.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 34.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 34.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 34.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 33.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 33.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 33.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 33.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 33.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 32.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 32.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 32.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 32.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 32.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 31.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 31.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 31.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 31.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 31.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 31.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 31.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 31.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 30.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 30.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 30.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 30.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 30.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 30.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 30.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 29.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 28.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 28.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 28.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 28.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 27.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 27.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 27.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 27.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 26.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 26.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 26.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 26.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 25.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 23.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 23.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 23.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 23.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 22.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 22.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 22.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 22.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 21.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 20.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 19.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 19.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 18.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 15.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 28.9
Samples: 246

Max nTPM: 88.0
Min nTPM: 8.8
Std nTPM: 8.5
Median nTPM: 28.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 88.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 54.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 53.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 52.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 49.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 47.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 46.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 45.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 45.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 44.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 44.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 44.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 43.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 43.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 42.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 42.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 41.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 41.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 40.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 40.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 39.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 39.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 39.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 38.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 38.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 38.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 37.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 37.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 37.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 37.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 37.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 36.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 36.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 36.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 36.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 34.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 34.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 34.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 34.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 34.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 34.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 34.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 34.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 34.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 34.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 34.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 34.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 33.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 33.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 33.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 33.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 33.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 33.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 32.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 32.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 32.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 32.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 32.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 32.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 32.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 32.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 32.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 31.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 31.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 31.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 31.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 31.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 31.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 31.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 31.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 31.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 31.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 31.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 31.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 31.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 31.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 31.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 31.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 31.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 30.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 30.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 30.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 30.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 30.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 30.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 30.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 30.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 30.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 30.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 30.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 29.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 29.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 29.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 29.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 29.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 29.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 29.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 29.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 29.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 29.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 29.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 29.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 29.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 29.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 29.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 29.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 29.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 29.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 29.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 29.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 29.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 28.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 28.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 28.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 28.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 28.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 28.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 28.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 28.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 28.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 28.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 28.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 27.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 27.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 27.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 27.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 27.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 27.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 27.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 27.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 27.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 27.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 27.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 27.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 27.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 27.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 27.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 27.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 27.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 26.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 26.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 26.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 26.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 26.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 26.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 26.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 26.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 26.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 26.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 26.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 26.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 26.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 26.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 26.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 26.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 26.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 26.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 26.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 25.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 25.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 25.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 25.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 25.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 25.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 25.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 25.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 25.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 25.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 25.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 25.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 25.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 25.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 24.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 24.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 24.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 24.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 24.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 24.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 24.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 24.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 24.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 24.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 24.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 24.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 24.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 24.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 23.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 23.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 23.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 23.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 23.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 23.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 23.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 22.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 22.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 21.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 21.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 21.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 21.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 21.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 21.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 21.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 21.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 21.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 21.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 20.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 20.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 20.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 20.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 19.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 19.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 18.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 18.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 18.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 18.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 18.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 18.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 18.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 18.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 18.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 18.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 17.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 16.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 16.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 16.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 16.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 16.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 16.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 14.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 14.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 14.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 14.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 13.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 13.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 12.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 12.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.8
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Brain - Putamen (basal ganglia)
Average nTPM: 47.7
Samples: 205

Max nTPM: 110.9
Min nTPM: 18.9
Std nTPM: 13.2
Median nTPM: 46.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 110.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 93.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 83.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 80.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 77.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 75.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 75.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 72.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 70.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 68.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 67.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 67.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 66.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 66.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 65.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 65.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 64.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 64.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 63.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 63.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 63.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 62.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 62.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 62.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 62.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 62.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 62.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 62.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 61.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 61.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 60.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 60.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 60.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 59.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 59.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 58.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 58.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 58.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 58.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 58.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 58.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 57.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 57.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 56.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 56.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 55.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 55.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 55.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 54.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 54.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 54.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 54.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 54.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 53.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 53.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 53.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 53.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 52.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 52.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 52.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 51.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 51.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 51.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 51.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 50.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 50.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 50.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 50.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 50.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 50.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 50.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 49.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 49.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 49.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 49.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 49.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 49.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 49.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 49.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 49.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 48.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 48.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 47.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 47.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 47.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 47.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 47.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 47.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 46.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 46.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 46.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 46.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 46.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 46.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 45.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 45.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 45.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 45.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 45.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 45.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 45.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 45.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 45.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 45.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 44.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 44.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 44.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 43.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 43.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 43.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 43.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 43.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 42.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 42.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 42.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 42.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 42.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 42.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 42.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 42.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 42.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 42.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 42.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 41.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 41.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 40.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 40.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 40.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 40.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 40.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 39.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 39.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 39.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 39.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 39.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 38.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 38.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 38.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 38.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 38.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 38.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 37.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 37.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 37.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 37.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 37.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 36.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 36.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 36.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 36.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 34.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 34.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 34.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 34.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 34.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 34.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 34.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 33.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 32.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 31.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 31.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 31.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 30.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 30.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 30.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 30.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 29.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 28.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 28.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 27.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 26.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 25.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 25.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 23.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 23.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 20.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 18.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

296.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 121.3
FF:10164-103B2 76 years, female 121.3
Nucleus accumbens
Scaled Tags Per Million: 296.5
FF:10037-101F1 23-56 years, mixed 296.5
Putamen
Scaled Tags Per Million: 72.7
FF:10176-103C5 60 years, female 72.7
Globus pallidus
Scaled Tags Per Million: 127.9
FF:10161-103A8 76 years, female 147.5
FF:10175-103C4 60 years, female 108.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.2
Pig sample Sample description nTPM
Caudate
nTPM: 44.3
Samples: 4

Max nTPM: 57.7
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 46.3
Sample C Male 57.7
Sample D Male 40.4
Putamen
nTPM: 45.2
Samples: 4

Max nTPM: 59.0
Min nTPM: 26.6
Sample A Female 26.6
Sample B Female 47.6
Sample C Male 59.0
Sample D Male 47.4
Septum
nTPM: 31.2
Samples: 4

Max nTPM: 34.1
Min nTPM: 26.7
Sample A Female 31.2
Sample B Female 32.9
Sample C Male 34.1
Sample D Male 26.7
Ventral pallidum
nTPM: 34.2
Samples: 4

Max nTPM: 36.6
Min nTPM: 31.7
Sample A Female 36.1
Sample B Female 36.6
Sample C Male 32.5
Sample D Male 31.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 28.7
Samples: 4

Max nTPM: 30.2
Min nTPM: 26.6
Sample A Male 28.0
Sample B Male 30.2
Sample C Female 29.8
Sample D Female 26.6
Septum
nTPM: 18.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 17.3
Sample A Male 17.5
Sample B Male 19.0
Sample C Female 18.7
Sample D Female 17.3
Ventral forebrain
nTPM: 26.4
Samples: 4

Max nTPM: 27.8
Min nTPM: 24.1
Sample A Male 27.1
Sample B Male 24.1
Sample C Female 27.8
Sample D Female 26.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.7
2551 Antisense, RP_040420_01_B10, Mouse strain C57BL/6J (56 days, male) 1.7
2552 Antisense, RP_040420_01_B10, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 1.8
2551 Antisense, RP_040420_01_B10, Mouse strain C57BL/6J (56 days, male) 1.8
2552 Antisense, RP_040420_01_B10, Mouse strain C57BL/6J (56 days, male) 1.6

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