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SMARCE1
HPA
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  • SMARCE1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SMARCE1
Synonyms BAF57
Gene descriptioni

Full gene name according to HGNC.

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Disease related genes
Human disease related genes
Plasma proteins
Transcription factors
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q21.2
Chromosome location (bp) 40624962 - 40648654
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

24
Ensembl ENSG00000073584 (version 109)
Entrez gene 6605
HGNC HGNC:11109
UniProt Q969G3 (UniProt - Evidence at protein level)
neXtProt NX_Q969G3
GeneCards SMARCE1
Antibodypedia SMARCE1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a postmitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to postmitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth (By similarity). Required for the coactivation of estrogen responsive promoters by SWI/SNF complexes and the SRC/p160 family of histone acetyltransferases (HATs). Also specifically interacts with the CoREST corepressor resulting in repression of neuronal specific gene promoters in non-neuronal cells.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chromatin regulator, DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Neurogenesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is part of the large ATP-dependent chromatin remodeling complex SWI/SNF, which is required for transcriptional activation of genes normally repressed by chromatin. The encoded protein, either alone or when in the SWI/SNF complex, can bind to 4-way junction DNA, which is thought to mimic the topology of DNA as it enters or exits the nucleosome. The protein contains a DNA-binding HMG domain, but disruption of this domain does not abolish the DNA-binding or nucleosome-displacement activities of the SWI/SNF complex. Unlike most of the SWI/SNF complex proteins, this protein has no yeast counterpart. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SMARCE1-201
ENSP00000466608
ENST00000264640
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
363 aa
41.8 kDa
No 0
SMARCE1-202
ENSP00000323967
ENST00000348513
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
A0A024R1S7
[Target identity:100%; Query identity:100%] SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0022008 [neurogenesis]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
411 aa
46.6 kDa
No 0
SMARCE1-203
ENSP00000367039
ENST00000377808
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
328 aa
38 kDa
No 0
SMARCE1-204
ENSP00000411607
ENST00000400122
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
293 aa
34.4 kDa
No 0
SMARCE1-205
ENSP00000445370
ENST00000431889
B4DGM3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1; cDNA FLJ55202, highly similar to SWI/SNF-related matrix-associatedactin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
393 aa
44.8 kDa
No 0
SMARCE1-206
ENSP00000392958
ENST00000447024
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
363 aa
41.8 kDa
No 0
SMARCE1-208
ENSP00000463405
ENST00000474246
J3QL66
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
77 aa
8.3 kDa
No 0
SMARCE1-209
ENSP00000463216
ENST00000478349
J3QKS7
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
287 aa
33.3 kDa
No 0
SMARCE1-212
ENSP00000462857
ENST00000577721
J3KT85
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
109 aa
12.9 kDa
No 0
SMARCE1-213
ENSP00000464511
ENST00000578044
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
341 aa
39.3 kDa
No 0
SMARCE1-216
ENSP00000462475
ENST00000580419
A0A2U3TZQ7
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
311 aa
35.9 kDa
No 0
SMARCE1-217
ENSP00000464061
ENST00000580654
J3QR61
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
259 aa
30 kDa
No 0
SMARCE1-218
ENSP00000463282
ENST00000582955
J3QKX6
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
135 aa
15.4 kDa
No 0
SMARCE1-220
ENSP00000496546
ENST00000642459
A0A2R8Y7U4
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
297 aa
34.5 kDa
No 0
SMARCE1-223
ENSP00000494771
ENST00000643318
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
341 aa
39.3 kDa
No 0
SMARCE1-226
ENSP00000496094
ENST00000643683
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
A0A024R1S7
[Target identity:100%; Query identity:100%] SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
411 aa
46.6 kDa
No 0
SMARCE1-227
ENSP00000493729
ENST00000643806
A0A2R8YDD9
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
51 aa
5.3 kDa
No 0
SMARCE1-232
ENSP00000493974
ENST00000644527
A0A2R8Y4T4
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
335 aa
38.5 kDa
No 0
SMARCE1-233
ENSP00000496097
ENST00000644701
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
363 aa
41.8 kDa
No 0
SMARCE1-235
ENSP00000496311
ENST00000645104
A0A2R8Y7I9
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
332 aa
38.1 kDa
No 0
SMARCE1-242
ENSP00000494537
ENST00000646283
A0A2R8YES3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
347 aa
39.9 kDa
No 0
SMARCE1-245
ENSP00000496661
ENST00000646482
A0A2R8Y855
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
367 aa
41.9 kDa
No 0
SMARCE1-250
ENSP00000496445
ENST00000647508
Q969G3
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Other all-alpha-helical DNA-binding domains
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000776 [kinetochore]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006337 [nucleosome disassembly]
GO:0006338 [chromatin remodeling]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007399 [nervous system development]
GO:0008080 [N-acetyltransferase activity]
GO:0016363 [nuclear matrix]
GO:0016514 [SWI/SNF complex]
GO:0016586 [RSC-type complex]
GO:0016922 [nuclear receptor binding]
GO:0030071 [regulation of mitotic metaphase/anaphase transition]
GO:0031492 [nucleosomal DNA binding]
GO:0032991 [protein-containing complex]
GO:0035060 [brahma complex]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045597 [positive regulation of cell differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0047485 [protein N-terminus binding]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071564 [npBAF complex]
GO:0071565 [nBAF complex]
GO:0140092 [bBAF complex]
GO:1902459 [positive regulation of stem cell population maintenance]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000781 [positive regulation of double-strand break repair]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
376 aa
42.8 kDa
No 0
SMARCE1-251
ENSP00000495857
ENST00000647515
A0A2R8Y765
[Direct mapping] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
   COSMIC Germline Mutations
   COSMIC Frameshift Mutations
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006338 [chromatin remodeling]
GO:0016514 [SWI/SNF complex]
Show all
277 aa
32.3 kDa
No 0

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