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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
35.9
nTPM
HPA Brain:
48.7
nTPM
GTEx:
35.9
nTPM
FANTOM5:
32.6
Scaled Tags Per Million
Pig:
57.0
nTPM
Mouse:
76.6
nTPM
Allen mouse:
1.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.7
Sample id
Sample description
nTPM
Amygdala nTPM: 48.7
2514
Male, age 75, right hemisphere
62.9
1987
Female, age 91, left hemisphere
52.4
2814
Male, age 76, right hemisphere
47.4
2517
Female, age 94, left hemisphere
41.5
2695
Female, age 67, right hemisphere
39.4
Basal amygdala nTPM: 41.8
2609
Male, age 75, right hemisphere
52.4
1955
Male, age 76, both hemispheres
46.8
2110
Male, age 80, left hemisphere
45.8
2243
Female, age 91, right hemisphere
44.2
2685
Female, age 94, left hemisphere
34.4
2827
Female, age 67, right hemisphere
27.0
Central amygdala nTPM: 42.7
2239
Male, age 80, left hemisphere
47.3
2515
Male, age 75, right hemisphere
46.7
2701
Female, age 91, right hemisphere
45.5
1905
Male, age 76, both hemispheres
45.2
2826
Female, age 94, left hemisphere
28.6
Corticomedial amygdala nTPM: 47.3
2428
Male, age 75, right hemisphere
56.9
2429
Female, age 94, left hemisphere
53.8
2240
Male, age 76, both hemispheres
52.7
2829
Male, age 80, left hemisphere
46.1
2242
Female, age 91, right hemisphere
45.5
2535
Female, age 67, right hemisphere
29.0
Lateral amygdala nTPM: 40.9
2516
Male, age 75, right hemisphere
53.3
2255
Female, age 91, right hemisphere
43.1
1883
Male, age 76, both hemispheres
41.9
2256
Male, age 80, left hemisphere
41.7
2830
Female, age 67, right hemisphere
34.2
2534
Female, age 94, left hemisphere
31.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
35.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 35.9
Samples: 152
Max nTPM: 82.1
Min nTPM: 10.4
Std nTPM: 13.6
Median nTPM: 34.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
82.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
69.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
68.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
68.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
64.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
60.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
60.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
59.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
59.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
59.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
59.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
58.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
57.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
56.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
55.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
54.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
53.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
53.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
52.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
52.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
52.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
52.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
50.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
50.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
50.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
49.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
49.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
48.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
48.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
48.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
48.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
47.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
46.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
46.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
46.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
46.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
45.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
44.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
43.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
43.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
42.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
42.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
42.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
42.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
42.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
41.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
41.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
40.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
40.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
40.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
40.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
39.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
39.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
38.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
38.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
38.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
37.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
37.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
37.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
37.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
37.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
36.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
36.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
36.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
35.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
35.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
35.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
35.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
35.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
34.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
34.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
34.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
34.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
33.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
33.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
33.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
33.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
33.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
32.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
31.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
30.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
30.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
30.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
29.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
29.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
29.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
29.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
29.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
29.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
29.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
29.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
28.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
28.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
28.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
28.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
27.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
27.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
27.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
27.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
27.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
27.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
26.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
26.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
26.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
26.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
26.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
25.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
25.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
25.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
25.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
25.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
25.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
25.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
24.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
24.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
24.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
24.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
23.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
23.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
23.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
22.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
22.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
22.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
22.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
21.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
21.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
21.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
21.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
21.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
21.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
20.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
20.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
20.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
20.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
20.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
20.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
20.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
19.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
19.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
19.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
19.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
17.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
17.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
13.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
12.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
10.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 76.6
Samples: 4
Max nTPM: 79.8
Min nTPM: 67.5
Sample A
Male
67.5
Sample B
Male
79.3
Sample C
Female
79.8
Sample D
Female
79.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
