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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:69.2 nTPM
HPA Brain:384.8 nTPM
GTEx:69.2 nTPM
FANTOM5:266.2 Scaled Tags Per Million
Pig:218.4 nTPM
Mouse:107.7 nTPM
Allen mouse:4.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019053Antibody HPA019061
Glial cells LowNot detected
Neuronal cells LowLow


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

384.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 231.2
2288 Male, age 75, left hemisphere 274.1
2846 Female, age 79, unknown 267.0
2481 Female, age 94, left hemisphere 233.7
1781 Male, age 74, unknown 231.5
1857 Female, age 85, left hemisphere 219.7
1854 Male, age 80, left hemisphere 218.8
2290 Female, age 72, unknown 218.0
2289 Male, age 61, right hemisphere 186.6
Globus pallidus, externus
nTPM: 331.8
1996 Male, age 80, right hemisphere 411.2
2772 Female, age 79, unknown 340.8
2395 Male, age 75, both hemispheres 323.8
2646 Male, age 61, right hemisphere 295.3
2567 Female, age 72, unknown 288.0
Globus pallidus, internus
nTPM: 384.8
2287 Male, age 75, right hemisphere 453.1
2778 Female, age 91, both hemispheres 419.7
2037 Male, age 80, right hemisphere 389.6
2483 Female, age 94, right hemisphere 386.1
2111 Female, age 85, right hemisphere 376.9
1818 Male, age 74, unknown 343.8
2566 Female, age 72, unknown 324.0
Nucleus accumbens
nTPM: 244.6
2391 Female, age 94, left hemisphere 337.4
2698 Female, age 72, unknown 326.7
2286 Male, age 75, left hemisphere 255.8
1806 Female, age 85, left hemisphere 227.4
2732 Male, age 80, right hemisphere 214.5
1783 Male, age 74, unknown 207.6
1856 Female, age 91, right hemisphere 206.7
2824 Male, age 61, right hemisphere 181.0
Nucleus basalis of Meynert
nTPM: 266.0
2569 Male, age 61, both hemispheres 313.5
2821 Male, age 75, both hemispheres 278.7
2484 Female, age 94, left hemisphere 247.2
2393 Male, age 80, right hemisphere 224.6
Nucleus of the diagonal band
nTPM: 177.7
1812 Female, age 91, both hemispheres 191.0
2775 Male, age 80, right hemisphere 177.9
2195 Female, age 85, both hemispheres 177.5
1979 Male, age 74, unknown 175.9
2029 Male, age 61, right hemisphere 166.1
Putamen
nTPM: 238.5
2482 Female, age 94, left hemisphere 269.2
1829 Male, age 74, unknown 264.8
2647 Male, age 75, left hemisphere 257.7
1937 Female, age 91, right hemisphere 242.0
2489 Female, age 72, unknown 223.5
2466 Female, age 79, unknown 209.3
1838 Male, age 80, right hemisphere 202.6
Septal nuclei
nTPM: 196.0
2394 Male, age 61, left hemisphere 248.8
2199 Male, age 80, right hemisphere 208.8
2629 Female, age 94, right hemisphere 205.9
2031 Female, age 72, unknown 197.1
2009 Female, age 91, both hemispheres 179.6
2059 Female, age 85, both hemispheres 165.9
1960 Male, age 74, unknown 165.7
Stria terminalis, bed nucleus
nTPM: 178.3
1974 Female, age 91, both hemispheres 202.9
2201 Male, age 74, unknown 174.6
2486 Female, age 94, both hemispheres 157.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 65.0
Samples: 246

Max nTPM: 108.5
Min nTPM: 36.9
Std nTPM: 12.1
Median nTPM: 64.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 108.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 98.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 97.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 97.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 95.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 95.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 92.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 92.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 90.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 90.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 89.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 88.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 87.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 87.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 87.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 86.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 85.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 83.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 83.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 83.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 82.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 82.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 82.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 82.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 81.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 81.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 81.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 79.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 79.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 79.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 79.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 77.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 77.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 77.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 76.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 76.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 76.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 76.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 75.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 75.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 74.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 73.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 73.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 73.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 73.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 73.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 73.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 73.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 73.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 73.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 72.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 72.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 72.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 72.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 72.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 71.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 71.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 71.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 71.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 71.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 71.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 70.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 70.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 70.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 69.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 69.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 69.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 68.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 68.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 68.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 68.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 67.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 67.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 67.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 67.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 67.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 67.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 67.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 67.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 67.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 67.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 67.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 67.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 66.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 66.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 66.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 66.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 66.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 66.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 65.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 65.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 65.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 65.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 65.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 65.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 65.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 65.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 65.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 64.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 64.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 64.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 64.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 64.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 64.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 64.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 63.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 63.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 63.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 63.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 62.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 62.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 62.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 62.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 62.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 62.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 61.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 61.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 61.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 61.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 61.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 61.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 61.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 61.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 60.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 60.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 60.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 60.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 59.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 59.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 59.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 59.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 59.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 59.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 58.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 58.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 58.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 57.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 57.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 57.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 57.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 57.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 57.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 57.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 56.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 56.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 56.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 56.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 56.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 55.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 55.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 55.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 55.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 54.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 54.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 54.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 54.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 54.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 54.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 54.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 54.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 54.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 54.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 54.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 54.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 53.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 53.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 53.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 53.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 52.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 52.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 52.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 52.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 51.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 51.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 51.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 51.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 51.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 51.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 51.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 50.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 50.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 50.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 50.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 50.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 50.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 50.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 50.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 49.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 49.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 49.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 48.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 47.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 47.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 46.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 46.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 46.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 45.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 45.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 42.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 41.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 41.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 36.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 53.6
Samples: 246

Max nTPM: 170.6
Min nTPM: 33.2
Std nTPM: 14.9
Median nTPM: 50.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 170.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 114.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 109.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 107.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 99.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 90.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 90.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 84.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 81.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 81.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 80.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 80.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 79.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 79.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 78.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 77.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 76.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 76.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 75.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 74.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 73.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 72.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 70.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 69.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 69.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 68.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 68.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 68.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 67.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 67.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 66.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 66.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 65.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 65.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 64.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 64.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 64.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 64.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 63.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 63.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 63.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 62.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 62.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 62.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 62.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 62.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 61.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 61.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 60.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 60.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 59.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 59.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 59.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 58.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 58.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 58.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 58.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 57.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 57.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 57.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 57.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 57.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 57.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 57.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 56.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 56.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 56.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 56.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 56.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 55.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 55.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 55.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 55.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 55.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 55.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 55.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 54.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 54.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 54.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 54.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 54.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 54.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 54.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 54.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 54.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 53.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 53.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 53.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 53.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 53.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 53.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 53.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 53.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 53.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 53.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 53.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 52.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 52.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 52.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 52.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 52.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 52.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 51.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 51.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 51.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 51.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 51.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 50.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 50.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 50.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 50.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 50.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 50.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 50.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 50.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 50.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 50.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 50.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 49.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 49.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 49.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 49.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 49.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 49.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 49.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 49.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 49.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 48.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 48.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 48.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 48.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 48.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 48.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 48.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 48.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 48.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 47.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 47.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 47.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 47.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 47.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 47.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 47.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 47.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 47.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 47.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 47.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 47.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 47.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 47.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 47.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 47.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 47.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 47.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 47.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 47.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 46.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 46.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 46.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 46.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 46.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 46.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 46.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 46.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 46.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 46.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 46.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 46.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 45.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 45.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 45.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 45.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 45.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 45.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 44.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 44.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 44.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 44.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 44.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 44.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 44.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 44.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 43.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 43.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 43.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 43.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 43.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 43.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 43.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 42.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 42.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 42.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 42.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 42.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 42.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 42.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 42.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 41.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 41.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 41.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 41.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 41.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 41.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 41.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 41.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 41.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 41.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 41.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 41.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 41.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 40.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 40.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 40.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 40.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 40.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 40.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 39.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 39.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 39.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 39.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 38.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 38.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 37.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 37.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 37.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 36.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 36.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 36.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 36.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 35.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 35.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 35.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 35.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 33.2
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Brain - Putamen (basal ganglia)
Average nTPM: 69.2
Samples: 205

Max nTPM: 141.1
Min nTPM: 39.3
Std nTPM: 15.9
Median nTPM: 66.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 141.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 129.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 116.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 116.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 114.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 113.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 112.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 105.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 104.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 100.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 98.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 97.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 96.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 95.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 94.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 94.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 93.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 92.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 90.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 90.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 90.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 88.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 87.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 86.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 85.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 84.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 83.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 83.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 83.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 82.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 82.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 82.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 81.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 81.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 80.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 79.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 79.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 79.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 79.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 78.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 78.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 78.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 78.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 77.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 77.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 76.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 76.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 76.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 76.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 75.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 75.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 75.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 75.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 75.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 74.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 74.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 74.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 74.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 74.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 74.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 73.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 73.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 73.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 73.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 72.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 72.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 72.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 72.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 72.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 72.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 71.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 71.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 71.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 70.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 70.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 70.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 70.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 70.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 70.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 70.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 70.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 70.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 69.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 69.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 69.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 69.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 68.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 68.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 67.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 67.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 67.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 67.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 67.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 66.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 66.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 66.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 65.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 65.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 65.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 65.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 65.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 65.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 65.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 64.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 64.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 64.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 64.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 64.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 64.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 64.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 64.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 64.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 63.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 63.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 63.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 63.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 63.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 62.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 62.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 62.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 62.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 62.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 62.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 62.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 61.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 61.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 61.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 61.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 61.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 60.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 60.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 60.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 60.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 60.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 60.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 60.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 59.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 59.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 59.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 59.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 59.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 58.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 58.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 58.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 58.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 58.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 58.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 57.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 57.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 57.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 57.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 57.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 57.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 56.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 56.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 55.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 55.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 54.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 54.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 54.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 54.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 54.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 54.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 54.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 53.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 53.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 53.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 52.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 52.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 52.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 51.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 51.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 51.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 50.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 50.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 50.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 50.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 50.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 49.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 49.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 49.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 47.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 45.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 44.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 44.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 39.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 39.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 39.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

266.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 142.5
FF:10164-103B2 76 years, female 142.5
Nucleus accumbens
Scaled Tags Per Million: 149.0
FF:10037-101F1 23-56 years, mixed 149.0
Putamen
Scaled Tags Per Million: 163.1
FF:10176-103C5 60 years, female 163.1
Globus pallidus
Scaled Tags Per Million: 266.2
FF:10175-103C4 60 years, female 267.6
FF:10161-103A8 76 years, female 264.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.4
Pig sample Sample description nTPM
Caudate
nTPM: 135.1
Samples: 4

Max nTPM: 146.2
Min nTPM: 118.1
Sample A Female 142.3
Sample B Female 118.1
Sample C Male 146.2
Sample D Male 133.9
Putamen
nTPM: 218.4
Samples: 4

Max nTPM: 267.4
Min nTPM: 163.1
Sample A Female 267.4
Sample B Female 163.1
Sample C Male 241.2
Sample D Male 201.9
Septum
nTPM: 150.5
Samples: 4

Max nTPM: 160.5
Min nTPM: 142.5
Sample A Female 160.5
Sample B Female 142.5
Sample C Male 153.5
Sample D Male 145.3
Ventral pallidum
nTPM: 173.0
Samples: 4

Max nTPM: 200.0
Min nTPM: 147.0
Sample A Female 147.0
Sample B Female 200.0
Sample C Male 173.0
Sample D Male 171.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 107.7
Samples: 4

Max nTPM: 111.9
Min nTPM: 103.2
Sample A Male 107.3
Sample B Male 103.2
Sample C Female 111.9
Sample D Female 108.2
Septum
nTPM: 96.8
Samples: 4

Max nTPM: 104.2
Min nTPM: 86.9
Sample A Male 86.9
Sample B Male 94.7
Sample C Female 101.5
Sample D Female 104.2
Ventral forebrain
nTPM: 96.9
Samples: 4

Max nTPM: 99.0
Min nTPM: 94.8
Sample A Male 94.8
Sample B Male 97.0
Sample C Female 99.0
Sample D Female 96.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.0
68301539 Antisense, RP_041130_01_D08, Mouse strain C57BL/6J (56 days, male) 4.0
Pallidum
Expression energy: 3.8
68301539 Antisense, RP_041130_01_D08, Mouse strain C57BL/6J (56 days, male) 3.8

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